RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ST8SIA5O15466 376 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 WDR1O75083 606 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 CYC1P08574 325 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 CRYBB2P43320 205 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 HYAL1Q12794 435 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 CLLU1Q5K131 121 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 LHX4Q969G2 390 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 C8orf44Q96CB5 159 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 TAAR9Q96RI9 348 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 DNAJB12Q9NXW2 375 aaKnown RBP10.57□□□□□ -0.72
COL9A1-202ENST00000357250 LRP12Q9Y561 859 aa10.57□□□□□ -0.72
COL9A1-202ENST00000357250 CCDC187A0A096LP49 1063 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 TOX3O15405 576 aaPredicted RBP10.56□□□□□ -0.72
COL9A1-202ENST00000357250 GALR2O43603 387 aaPredicted RBP10.56□□□□□ -0.72
COL9A1-202ENST00000357250 OR2C1O95371 312 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 DEFA4P12838 97 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 NDUFB7P17568 137 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 UBE2G1P62253 170 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 RPUSD3Q6P087 351 aaKnown RBP10.56□□□□□ -0.72
COL9A1-202ENST00000357250 IL34Q6ZMJ4 242 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 SLC25A26Q70HW3 274 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 ST8SIA4Q92187 359 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 DERL3Q96Q80 235 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 MTFP1Q9UDX5 166 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 SVILO95425 2214 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 CD80P33681 288 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 TGFBR1P36897 503 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 PIGPP57054 158 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 UBE2G2P60604 165 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 ERHP84090 104 aaKnown RBP10.56□□□□□ -0.72
COL9A1-202ENST00000357250 SLC25A35Q3KQZ1 300 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 TIGITQ495A1 244 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 CCDC71Q8IV32 467 aaPredicted RBP10.56□□□□□ -0.72
COL9A1-202ENST00000357250 OR1F12Q8NHA8 337 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 PPP1R1CQ8WVI7 109 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 RDH5Q92781 318 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 NTNG2Q96CW9 530 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 BSCL2Q96G97 398 aaPredicted RBP10.56□□□□□ -0.72
COL9A1-202ENST00000357250 MAP6Q96JE9 813 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 FOXB1Q99853 325 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 FAM173AQ9BQD7 235 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 RYDENQ9NUL5 291 aaKnown RBP10.56□□□□□ -0.72
COL9A1-202ENST00000357250 MYOFQ9NZM1 2061 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 GPR31O00270 319 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 SDCBPO00560 298 aaPredicted RBP10.56□□□□□ -0.72
COL9A1-202ENST00000357250 OR13C7P0DN81 318 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 GALNSP34059 522 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 CSN1S1P47710 185 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 NDUFA6P56556 154 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 ARL16Q0P5N6 197 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 ZIC1Q15915 447 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 PRICKLE4Q2TBC4 344 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 LINC00303Q3SY05 128 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 ZBTB37Q5TC79 503 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 PELI1Q96FA3 418 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 KCNE3Q9Y6H6 103 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 UNC13CQ8NB66 2214 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 ABCD4O14678 606 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 IGHV3-9P01782 118 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 OPRM1P35372 400 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 GABRA4P48169 554 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 ADAM5Q6NVV9 412 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 BTNL8Q6UX41 500 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 ETFBKMTQ8IXQ9 262 aa10.56□□□□□ -0.72
COL9A1-202ENST00000357250 RIF1Q5UIP0 2472 aaKnown RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 PLXNB2O15031 1838 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 SLC22A20A6NK97 555 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 F10P00742 488 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 CT45A10P0DMU9 189 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 PTAFRP25105 342 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 H3F3AP84243 136 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 NLRC3Q7RTR2 1065 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 THNSL2Q86YJ6 484 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 SPICQ8N5J4 248 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 SCCPDHQ8NBX0 429 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 HGDQ93099 445 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 LRRC3BQ96PB8 259 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 RHNO1Q9BSD3 238 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 SOX7Q9BT81 388 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 PTDSS2Q9BVG9 487 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 RBM38Q9H0Z9 239 aaKnown RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 GAB2Q9UQC2 676 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 TMED3Q9Y3Q3 217 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF727A8MUV8 499 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 C2CD4DB7Z1M9 353 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 TRIM77I1YAP6 450 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 MAGEB4O15481 346 aaPredicted RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 PDGFBP01127 241 aaPredicted RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 PGA3P0DJD8 388 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 BPIFB3P59826 476 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 RNPS1Q15287 305 aaKnown RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 SPANXN5Q5MJ07 72 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 OR5AS1Q8N127 324 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 KTI12Q96EK9 354 aaPredicted RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 CXorf58Q96LI9 332 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 SLC23A1Q9UHI7 598 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 FLVCR2Q9UPI3 526 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 GREB1LQ9C091 1923 aaPredicted RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 OR6C68A6NDL8 312 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms