RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 MMP7P09237 267 aaPredicted RBP14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 PPP3CBP16298 524 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 ZNF32P17041 273 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 GABRA6Q16445 453 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 FAM131AQ6UXB0 335 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 SKA3Q8IX90 412 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 OR8B12Q8NGG6 310 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 OR51A4Q8NGJ6 313 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 ZNF671Q8TAW3 534 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 SETD6Q8TBK2 473 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 TRMT10AQ8TBZ6 339 aaKnown RBP14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 RAB40AQ8WXH6 277 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 PLPPR2Q96GM1 343 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 C1QTNF6Q9BXI9 259 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 OR10A4Q9H209 315 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 NEK6Q9HC98 313 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 STEAP1Q9UHE8 339 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 V9GYH0 126 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 MTORP42345 2549 aa14.22□□□□□ -0.13
PDLIM1-201ENST00000329399 A0A1B0GTI1 187 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 DPRXA6NFQ7 191 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 FAM25AB3EWG3 89 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 FAM25CB3EWG5 89 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 FAM25GB3EWG6 89 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 P2RY10O00398 339 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 ATF1P18846 271 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 DDOSTP39656 456 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 OR10A3P58181 314 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 PITPNAQ00169 270 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 PSG4Q00888 419 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 GALK2Q01415 458 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 ODF4Q2M2E3 257 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 UBE2NLQ5JXB2 153 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 HACD4Q5VWC8 232 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 OR10AC1Q8NH08 325 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 LILRB1Q8NHL6 650 aaPredicted RBP14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 NEUROG1Q92886 237 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 BRD7Q9NPI1 651 aa14.21□□□□□ -0.13
PDLIM1-201ENST00000329399 OR5H1A6NKK0 313 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 F5H5K5 113 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 SLC17A2O00624 439 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 HPGDSO60760 199 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 ALDOBP05062 364 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 ZNF20P17024 532 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 PLP2Q04941 152 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 TESK1Q15569 626 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 ZNF529Q6P280 563 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 CNIH2Q6PI25 160 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 FAM57BQ71RH2 274 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 SAMD12Q8N8I0 201 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 C1orf162Q8NEQ5 155 aaPredicted RBP14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 OR51E1Q8TCB6 317 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 PP6455Q8WZ26 134 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 UQCC2Q9BRT2 126 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 WNT5BQ9H1J7 359 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 RNF121Q9H920 327 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 MOV10Q9HCE1 1003 aaKnown RBP14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 TMEM138Q9NPI0 162 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 SLC25A15Q9Y619 301 aa14.2□□□□□ -0.14
PDLIM1-201ENST00000329399 CIB4A0PJX0 185 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 SMIM30A4D0T7 59 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 J3QW42 95 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 DHRS3O75911 302 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 GNALP38405 381 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 HTR5AP47898 357 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 SLC6A9P48067 706 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 PPA1Q15181 289 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 RSPO1Q2MKA7 263 aaPredicted RBP14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 HIKESHIQ53FT3 197 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 BEX5Q5H9J7 111 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 TIMM23BQ5SRD1 257 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 PYHIN1Q6K0P9 492 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 OR6M1Q8NGM8 313 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 OR1K1Q8NGR3 316 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 CHPT1Q8WUD6 406 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 PPP1R14AQ96A00 147 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 TMEM204Q9BSN7 226 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 SRRQ9GZT4 340 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 ABCG5Q9H222 651 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 OPA3Q9H6K4 179 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 RTTNQ86VV8 2226 aa14.19□□□□□ -0.14
PDLIM1-201ENST00000329399 TRAV8-7A0A075B6U6 113 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 XRCC2O43543 280 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 SULT1B1O43704 296 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 MAS1P04201 325 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 SERPINA5P05154 406 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 ADRA2CP18825 462 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 RAB3AP20336 220 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 BDKRB2P30411 391 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 THBS4P35443 961 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 PITPNBP48739 271 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 SCN1BQ07699 218 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 C1orf100Q5SVJ3 147 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 NCMAPQ5T1S8 102 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 ZNF774Q6NX45 483 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 UTS2BQ765I0 119 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 COMMD2Q86X83 199 aa14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 AKAP1Q92667 903 aaKnown RBP eCLIP14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 BCL2L2Q92843 193 aaPredicted RBP14.18□□□□□ -0.14
PDLIM1-201ENST00000329399 PTX4Q96A99 478 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms