RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 SGCAQ16586 387 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 KCTD18Q6PI47 426 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 ABHD6Q9BV23 337 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 PRR13Q9NZ81 148 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 HHLA2Q9UM44 414 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 PCDHGA1Q9Y5H4 931 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 LOC107986453A0A1B0GWG9 222 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 MEGF11A6BM72 1044 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 RNASEK-C17orf49H0YIS7 233 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 TO15178 435 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 PTAFRP25105 342 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 MPZP25189 248 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 F2RL1P55085 397 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 PLA2G2CQ5R387 149 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 FBXO17Q96EF6 278 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 ZNF251Q9BRH9 671 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 RNF122Q9H9V4 155 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 OR5AC2Q9NZP5 309 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 PTRH2Q9Y3E5 179 aaKnown RBP15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 C1orf196B1AJZ1 125 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 ADAP1O75689 374 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 KLK3P07288 261 aaPredicted RBP15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 CD59P13987 128 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 GNB3P16520 340 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 CX3CR1P49238 355 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 PPT1P50897 306 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 ROM1Q03395 351 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 RTN4RL2Q86UN3 420 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 NAA40Q86UY6 237 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 SLC25A36Q96CQ1 311 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 CLCC1Q96S66 551 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 SMCO4Q9NRQ5 59 aa15.21■□□□□ 0.03
SCAMP4-201ENST00000316097 OR2J2O76002 312 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 S100A8P05109 93 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 RPS18P62269 152 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 CYCSP99999 105 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 ADAMTS17Q8TE56 1095 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 LAT2Q9GZY6 243 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 CNTD2Q9H8S5 307 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 SEC61A2Q9H9S3 476 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 EP300Q09472 2414 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 PRSS37A4D1T9 235 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 ALG1L2C9J202 215 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 KLF7O75840 302 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 UMODP07911 640 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 FOLR2P14207 255 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 CTLA4P16410 223 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 CD80P33681 288 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 LPAR6P43657 344 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 SLC26A5P58743 744 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 INSM1Q01101 510 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 SLC9A3R2Q15599 337 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 TSC22D1Q15714 1073 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 EIF2S3LQ2VIR3 472 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 C1orf100Q5SVJ3 147 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 RAB22AQ9UL26 194 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 C5orf52A6NGY3 159 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 MED6O75586 246 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 CD37P11049 281 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 NME2P22392 152 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 ACKR1Q16570 336 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 PTX4Q96A99 478 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 CDC6Q99741 560 aa15.2■□□□□ 0.02
SCAMP4-201ENST00000316097 C9JQL5 133 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 LRP3O75074 770 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 MPZL1O95297 269 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 SERPINA5P05154 406 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 RAB6AP20340 208 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 CPT2P23786 658 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 SPEM2Q0P670 501 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 UNC119Q13432 240 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 TRA2AQ13595 282 aaKnown RBP eCLIP15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 SMIM8Q96KF7 97 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 LOC390937A0A1W2PQ73 354 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 ZNF44P15621 663 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 FAM76BQ5HYJ3 339 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 PRSS54Q6PEW0 395 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 OR52N5Q8NH56 324 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 HIST1H2BAQ96A08 127 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 SAT2Q96F10 170 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 SLC26A1Q9H2B4 701 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 LOXL2Q9Y4K0 774 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 WIF1Q9Y5W5 379 aa15.19■□□□□ 0.02
SCAMP4-201ENST00000316097 IGLV1-36A0A0B4J1U3 117 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 LOC101059948A0A1B0GTJ6 334 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 UBE2CO00762 179 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 ADAM10O14672 748 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 SLC6A9P48067 706 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 TAS2R31P59538 309 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 C15orf54Q8N8G6 183 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 OR51F2Q8NH61 342 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 SULT4A1Q9BR01 284 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 NAA11Q9BSU3 229 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 PISDQ9UG56 409 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 RPH3AQ9Y2J0 694 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 RHBDD3Q9Y3P4 386 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 R4GMQ9 66 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 DMXL1Q9Y485 3027 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 A0A1W2PPE3 182 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 SHISA8B8ZZ34 492 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms