RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PRSS12P56730 875 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 OR10R2Q8NGX6 335 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 ZNF486Q96H40 463 aaPredicted RBP12.11□□□□□ -0.47
DDX54-202ENST00000314045 OPA3Q9H6K4 179 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 SDCBPO00560 298 aaPredicted RBP12.11□□□□□ -0.47
DDX54-202ENST00000314045 SEMA7AO75326 666 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 TMIGD3P0DMS9 266 aaPredicted RBP12.11□□□□□ -0.47
DDX54-202ENST00000314045 GABRA4P48169 554 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 BTG1P62324 171 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 ZFP36L1Q07352 338 aaKnown RBP12.11□□□□□ -0.47
DDX54-202ENST00000314045 FAAP20Q6NZ36 180 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 ZBTB44Q8NCP5 570 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 OR8B12Q8NGG6 310 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 ABHD5Q8WTS1 349 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 TREM1Q9NP99 234 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 GLRX2Q9NS18 164 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 CD3DP04234 171 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 DCTDP32321 178 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 ZNF83P51522 516 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 MRPS34P82930 218 aaKnown RBP12.11□□□□□ -0.47
DDX54-202ENST00000314045 PMP22Q01453 160 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 DYRK1AQ13627 763 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 RGS7BPQ6MZT1 257 aaPredicted RBP12.11□□□□□ -0.47
DDX54-202ENST00000314045 LPCAT3Q6P1A2 487 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 TFAP2EQ6VUC0 442 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 CADM3Q8N126 398 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 OR10AC1Q8NH08 325 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 RNF133Q8WVZ7 376 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 GPR35Q9HC97 309 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 NECAP2Q9NVZ3 263 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 RALGAPA1Q6GYQ0 2036 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 PTHLHP12272 177 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 BCL2A1Q16548 175 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 AADACL3Q5VUY0 350 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 ARHGEF39Q8N4T4 335 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 CISD2Q8N5K1 135 aaKnown RBP12.11□□□□□ -0.47
DDX54-202ENST00000314045 FBLIM1Q8WUP2 373 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 WDFY2Q96P53 400 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 HRASLSQ9HDD0 168 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 OR5V1Q9UGF6 321 aa12.11□□□□□ -0.47
DDX54-202ENST00000314045 H3BMH7 237 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 ANXA7P20073 488 aaKnown RBP12.1□□□□□ -0.47
DDX54-202ENST00000314045 CAMK2BQ13554 666 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 TSPO2Q5TGU0 170 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 OR52N4Q8NGI2 321 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 MAFIPQ8WZ33 124 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 HGDQ93099 445 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 VOPP1Q96AW1 172 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 HES7Q9BYE0 225 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 MUC6Q6W4X9 2439 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 GLSO94925 669 aaPredicted RBP12.1□□□□□ -0.47
DDX54-202ENST00000314045 GSTP1P09211 210 aaKnown RBP12.1□□□□□ -0.47
DDX54-202ENST00000314045 GLRA1P23415 457 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 MECP2P51608 486 aaKnown RBP12.1□□□□□ -0.47
DDX54-202ENST00000314045 FBXW12Q6X9E4 464 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 KIRREL1Q96J84 757 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 UQCC2Q9BRT2 126 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 TMEM100Q9NV29 134 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 C19orf67A6NJJ6 358 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 SLC33A1O00400 549 aaPredicted RBP12.1□□□□□ -0.47
DDX54-202ENST00000314045 MMP16P51512 607 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 GPM6AP51674 278 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 PHLDA2Q53GA4 152 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 ZNF546Q86UE3 836 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 OSR2Q8N2R0 312 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 IMMP1LQ96LU5 166 aa12.1□□□□□ -0.47
DDX54-202ENST00000314045 UBL7Q96S82 380 aaPredicted RBP12.1□□□□□ -0.47
DDX54-202ENST00000314045 SH2D1BO14796 132 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 UPK3AO75631 287 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 DUSP1P28562 367 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 GNG3P63215 75 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 EGR4Q05215 589 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 LAIR2Q6ISS4 152 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 GPR27Q9NS67 375 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 SIRT4Q9Y6E7 314 aaPredicted RBP12.09□□□□□ -0.47
DDX54-202ENST00000314045 SIRPB1O00241 398 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 SULT1C2O00338 296 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 NTN3O00634 580 aaPredicted RBP12.09□□□□□ -0.47
DDX54-202ENST00000314045 CST2P09228 141 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 SNRPNP63162 240 aaKnown RBP12.09□□□□□ -0.47
DDX54-202ENST00000314045 SORDQ00796 357 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 GUCA2AQ02747 115 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 CDC20Q12834 499 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 TMEM91Q6ZNR0 172 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 C17orf50Q8WW18 174 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 SMCO3A2RU48 225 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 MS4A18H0YCH9 400 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 FABP7O15540 132 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 PTGFRP43088 359 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 MMP15P51511 669 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 MFGE8Q08431 387 aaPredicted RBP12.09□□□□□ -0.47
DDX54-202ENST00000314045 CATR1Q13166 79 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 ZNF169Q14929 603 aaPredicted RBP12.09□□□□□ -0.47
DDX54-202ENST00000314045 MS4A18Q3C1V0 323 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 TIPARPQ7Z3E1 657 aaKnown RBP12.09□□□□□ -0.47
DDX54-202ENST00000314045 MFSD4AQ8N468 514 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 NFAM1Q8NET5 270 aaPredicted RBP12.09□□□□□ -0.47
DDX54-202ENST00000314045 TECTBQ96PL2 329 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms