RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CCDC32Q9BV29 185 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 PRSS50Q9UI38 385 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 MPC1Q9Y5U8 109 aa8.18□□□□□ -1.1
PTPRE-202ENST00000306042 PCNX2A6NKB5 2137 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 ADAM20O43506 726 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 CD34P28906 385 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 COMTD1Q86VU5 262 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 BPIFB2Q8N4F0 458 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 OR4M1Q8NGD0 313 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 RNF128Q8TEB7 428 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 SLAMF9Q96A28 289 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 ADAM19Q9H013 955 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 RNF115Q9Y4L5 304 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 TRAV38-1A0A0B4J264 116 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 M0QZ24 198 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 FFAR1O14842 300 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 CNIH1O95406 144 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 IFNA5P01569 189 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 CSF3P09919 207 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 SNCAP37840 140 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 CFAP77Q6ZQR2 320 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 PHC2Q8IXK0 858 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 INTS1Q8N201 2190 aaKnown RBP8.17□□□□□ -1.1
PTPRE-202ENST00000306042 C1QTNF9BB2RNN3 333 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 SPRY1O43609 319 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-202ENST00000306042 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 RPP30P78346 268 aaKnown RBP8.17□□□□□ -1.1
PTPRE-202ENST00000306042 ZP4Q12836 540 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 ZNF181Q2M3W8 571 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 METAP1DQ6UB28 335 aaPredicted RBP8.17□□□□□ -1.1
PTPRE-202ENST00000306042 OSR2Q8N2R0 312 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 BMPERQ8N8U9 685 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 WDSUB1Q8N9V3 476 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 LRRC20Q8TCA0 184 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 S1PR3Q99500 378 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 ISG20L2Q9H9L3 353 aaKnown RBP8.17□□□□□ -1.1
PTPRE-202ENST00000306042 DLL3Q9NYJ7 618 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 ELOVL5Q9NYP7 299 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 CCDC59Q9P031 241 aaKnown RBP8.17□□□□□ -1.1
PTPRE-202ENST00000306042 KIAA1456Q9P272 454 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 ZNF724A8MTY0 619 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 FBXW12Q6X9E4 464 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 SLC25A40Q8TBP6 338 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 FBXW5Q969U6 566 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 ZFP57Q9NU63 452 aa8.17□□□□□ -1.1
PTPRE-202ENST00000306042 TSC2P49815 1807 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 OR5B21A6NL26 309 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 CEBPZOSA8MTT3 80 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 ANGPTL7O43827 346 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 DXOO77932 396 aaKnown RBP8.16□□□□□ -1.1
PTPRE-202ENST00000306042 HPNP05981 417 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 CTXN2P0C2S0 81 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 GABRA4P48169 554 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 FUT5Q11128 374 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 ZNF658BQ4V348 819 aaPredicted RBP8.16□□□□□ -1.1
PTPRE-202ENST00000306042 OR8D4Q8NGM9 314 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 OR13C5Q8NGS8 318 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 OR2M2Q96R28 347 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 SNX18Q96RF0 628 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 NUDT16L1Q9BRJ7 211 aaKnown RBP8.16□□□□□ -1.1
PTPRE-202ENST00000306042 FKBP14Q9NWM8 211 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 SDHAF2Q9NX18 166 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 KIF25Q9UIL4 384 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 HOXB1P14653 301 aaPredicted RBP8.16□□□□□ -1.1
PTPRE-202ENST00000306042 IL11P20809 199 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 GRK1Q15835 563 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 AKIRIN2Q53H80 203 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 ZFP62Q8NB50 900 aaPredicted RBP8.16□□□□□ -1.1
PTPRE-202ENST00000306042 PLPPR2Q96GM1 343 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 PSD2Q9BQI7 771 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 AICDAQ9GZX7 198 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 PRF1P14222 555 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 GPR6P46095 362 aaPredicted RBP8.16□□□□□ -1.1
PTPRE-202ENST00000306042 MVDP53602 400 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 RAB31Q13636 194 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 WDR38Q5JTN6 314 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 SYT6Q5T7P8 510 aaPredicted RBP8.16□□□□□ -1.1
PTPRE-202ENST00000306042 PIP4P1Q86T03 277 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 OR10AD1Q8NGE0 317 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 OR8B3Q8NGG8 313 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 GATA6Q92908 595 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 OR8B2Q96RD0 313 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 NECAP2Q9NVZ3 263 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 NLKQ9UBE8 527 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 CHST2Q9Y4C5 530 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 RTTNQ86VV8 2226 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 ANKRD36A6QL64 1941 aa8.16□□□□□ -1.1
PTPRE-202ENST00000306042 IFNL4K9M1U5 179 aa8.15□□□□□ -1.1
PTPRE-202ENST00000306042 SLC33A1O00400 549 aaPredicted RBP8.15□□□□□ -1.1
PTPRE-202ENST00000306042 CEBPGP53567 150 aa8.15□□□□□ -1.1
PTPRE-202ENST00000306042 OR2AK2Q8NG84 335 aa8.15□□□□□ -1.1
PTPRE-202ENST00000306042 LINC01560Q8TB33 94 aa8.15□□□□□ -1.1
PTPRE-202ENST00000306042 ISYNA1Q9NPH2 558 aa8.15□□□□□ -1.1
PTPRE-202ENST00000306042 TMEFF2Q9UIK5 374 aaPredicted RBP8.15□□□□□ -1.1
PTPRE-202ENST00000306042 LAMP3Q9UQV4 416 aa8.15□□□□□ -1.1
PTPRE-202ENST00000306042 BORCS7-ASMTA0A0B4J1R7 106 aa8.15□□□□□ -1.1
PTPRE-202ENST00000306042 H3BMH7 237 aa8.15□□□□□ -1.1
PTPRE-202ENST00000306042 K7ENP7 123 aa8.15□□□□□ -1.1
PTPRE-202ENST00000306042 LGALS8O00214 317 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms