RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 TMEM184BQ9Y519 407 aaPredicted RBP9.74□□□□□ -0.85
LSM3-201ENST00000306024 ALPK2Q86TB3 2170 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 NSG1A0A0A6YYJ2 146 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 LOC100289279A0A1B0GTE1 492 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 K7EPK0 472 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 WNT11O96014 354 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 CRHP06850 196 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 COTL1Q14019 142 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 MIDNQ504T8 468 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 ALG10BQ5I7T1 473 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 LY6G6FQ5SQ64 297 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 ZNF385CQ66K41 422 aaPredicted RBP9.74□□□□□ -0.85
LSM3-201ENST00000306024 ALKBH2Q6NS38 261 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 FAM71E2Q8N5Q1 922 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 ASB17Q8WXJ9 295 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 SLC46A1Q96NT5 459 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 ARHGDIGQ99819 225 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 KLRF1Q9NZS2 232 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 DHDHQ9UQ10 334 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 SDK2Q58EX2 2172 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 LOC390937A0A1W2PQ73 354 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 PIN1P1O15428 100 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 CYB5BO43169 146 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 OR8U9P0C7N5 309 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 AGAP20933 346 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 FGF7P21781 194 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 ID4P47928 161 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 ARFRP1Q13795 201 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 PRICKLE4Q2TBC4 344 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 ANKRD16Q6P6B7 361 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 TRAPPC6BQ86SZ2 158 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 KDF1Q8NAX2 398 aaPredicted RBP9.74□□□□□ -0.85
LSM3-201ENST00000306024 FAM46BQ96A09 425 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 ZNF426Q9BUY5 554 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 ADAMTS9Q9P2N4 1935 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 BHLHE40O14503 412 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 HCRTR2O43614 444 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 IFNA21P01568 189 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 CD74P04233 296 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 RAB4AP20338 218 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 RBMXP38159 391 aaKnown RBP9.73□□□□□ -0.85
LSM3-201ENST00000306024 HTR5AP47898 357 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 EFNB2P52799 333 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 EIF3IQ13347 325 aaKnown RBP9.73□□□□□ -0.85
LSM3-201ENST00000306024 ULK3Q6PHR2 472 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 COMMD2Q86X83 199 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 OR2L13Q8N349 312 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 Q96M85 177 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 PCDH15Q96QU1 1955 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 CDX4O14627 284 aaPredicted RBP9.73□□□□□ -0.85
LSM3-201ENST00000306024 ZFAND5O76080 213 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 CD8AP01732 235 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 CD37P11049 281 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 LPAR6P43657 344 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 TAS2R31P59538 309 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 SQSTM1Q13501 440 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 TOMM34Q15785 309 aaPredicted RBP9.73□□□□□ -0.85
LSM3-201ENST00000306024 ARL6IP6Q8N6S5 226 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 MITD1Q8WV92 249 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 MISP3Q96FF7 219 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 SDF2Q99470 211 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 UTP23Q9BRU9 249 aaKnown RBP9.73□□□□□ -0.85
LSM3-201ENST00000306024 METTL7AQ9H8H3 244 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 A0A0A6YYH2 397 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 C9orf170A2RU37 121 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 A6NJ64 397 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 SCAF4O95104 1147 aaKnown RBP9.73□□□□□ -0.85
LSM3-201ENST00000306024 THBS1P07996 1170 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 GGNBP1Q5YKI7 109 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 CCDC54Q8NEL0 328 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 ZPBPQ9BS86 351 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 ALG12Q9BV10 488 aa9.73□□□□□ -0.85
LSM3-201ENST00000306024 TEX13DA0A0J9YY54 714 aaPredicted RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 A0A1B0GTH9 108 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 HRKO00198 91 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 HIST1H1BP16401 226 aaKnown RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 ALDH3B1P43353 468 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 GLYATL3Q5SZD4 288 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 CPEB2Q7Z5Q1 589 aaKnown RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 ZNF101Q8IZC7 436 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 SHISA5Q8N114 240 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 TMEM229BQ8NBD8 167 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 DMBX1Q8NFW5 382 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 OR8U1Q8NH10 309 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 FAM213BQ8TBF2 198 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 VSX1Q9NZR4 365 aaPredicted RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 CGGBP1Q9UFW8 167 aaPredicted RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 SIGLEC7Q9Y286 467 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 KIF26BQ2KJY2 2108 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 LY6G6EA0A0G2JKS1 128 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 OR5H15A6NDH6 313 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 OR5H1A6NKK0 313 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 FGF16O43320 207 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 AHSA1O95433 338 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 FTH1P19P0C7X4 201 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 PI3P19957 117 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 BTF3P20290 206 aaKnown RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 HOXA5P20719 270 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 GABRA4P48169 554 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 GABREP78334 506 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms