RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ZDHHC12Q96GR4 267 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 GAR1Q9NY12 217 aaKnown RBP9.64□□□□□ -0.87
ZNF558-201ENST00000301475 METTL12A8MUP2 240 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 H0Y8X5 98 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 CLPSP04118 112 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 CD63P08962 238 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 DANCRP0C864 163 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 ATXN8OSP0DMR3 200 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H1DP16402 221 aaKnown RBP9.64□□□□□ -0.87
ZNF558-201ENST00000301475 BCKDHBP21953 392 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 TMEM50BP56557 158 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 RPS21P63220 83 aaKnown RBP9.64□□□□□ -0.87
ZNF558-201ENST00000301475 FMODQ06828 376 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 OPN5Q6U736 354 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 KDM8Q8N371 416 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 UBAC2Q8NBM4 344 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 OR10D4PQ8NGN7 298 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 MAFIPQ8WZ33 124 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 TSACCQ96A04 125 aaPredicted RBP9.64□□□□□ -0.87
ZNF558-201ENST00000301475 IER2Q9BTL4 223 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 FAM212BQ9NTI7 297 aaPredicted RBP9.64□□□□□ -0.87
ZNF558-201ENST00000301475 CUTCQ9NTM9 273 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 OSGIN2Q9Y236 505 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 TRIOBPQ9H2D6 2365 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 H7C1Q1 480 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 RAMP1O60894 148 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 DEDDO75618 318 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 MPIG6BO95866 241 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 HIST1H1BP16401 226 aaKnown RBP9.64□□□□□ -0.87
ZNF558-201ENST00000301475 LMO1P25800 156 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 S100A2P29034 98 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 GFI1BQ5VTD9 330 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 WDFY1Q8IWB7 410 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF101Q8IZC7 436 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 CCDC54Q8NEL0 328 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 OR14C36Q8NHC7 312 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 MUCL1Q96DR8 90 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 C1orf147Q96MC9 270 aaPredicted RBP9.64□□□□□ -0.87
ZNF558-201ENST00000301475 TGM7Q96PF1 710 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 SH3BGRL3Q9H299 93 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 IGFLR1Q9H665 355 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 FAM60AQ9NP50 221 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 KCNJ16Q9NPI9 418 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 UBQLN4Q9NRR5 601 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 PARPBPQ9NWS1 579 aa9.64□□□□□ -0.87
ZNF558-201ENST00000301475 GON4LQ3T8J9 2241 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 A6NCN8 305 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 TTRP02766 147 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 NDUFB7P17568 137 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 PPP1CCP36873 323 aaKnown RBP9.63□□□□□ -0.87
ZNF558-201ENST00000301475 GABRA4P48169 554 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 RAP1AP62834 184 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 GAMTQ14353 236 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 C1orf140Q5VVS0 124 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 LCN10Q6JVE6 187 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF343Q6P1L6 599 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 TMEM156Q8N614 296 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 COMMD1Q8N668 190 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 OR5H2Q8NGV7 314 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 DGAT2Q96PD7 388 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 PRRX2Q99811 253 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 CCDC3Q9BQI4 270 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 SLC35B3Q9H1N7 401 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 BANF2Q9H503 90 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 WFDC1Q9HC57 220 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 GFOD1Q9NXC2 390 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 LSM5Q9Y4Y9 91 aaKnown RBP9.63□□□□□ -0.87
ZNF558-201ENST00000301475 PUS1Q9Y606 427 aaKnown RBP eCLIP9.63□□□□□ -0.87
ZNF558-201ENST00000301475 TMEM131Q92545 1883 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 SCDO00767 359 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 KNG1P01042 644 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 CAMLGP49069 296 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 RBP2P50120 134 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF117Q03924 483 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 GLO1Q04760 184 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 FUT7Q11130 342 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 SGCBQ16585 318 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 PDZD11Q5EBL8 140 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF321PQ8N8H1 164 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 C19orf47Q8N9M1 422 aaKnown RBP9.63□□□□□ -0.87
ZNF558-201ENST00000301475 S100PBPQ96BU1 408 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 ARHGAP5-AS1Q96IT6 56 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 JSRP1Q96MG2 331 aaPredicted RBP9.63□□□□□ -0.87
ZNF558-201ENST00000301475 NUDT16L1Q9BRJ7 211 aaKnown RBP9.63□□□□□ -0.87
ZNF558-201ENST00000301475 ARV1Q9H2C2 271 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 TXNIPQ9H3M7 391 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 C19orf12Q9NSK7 152 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 MEMO1Q9Y316 297 aa9.63□□□□□ -0.87
ZNF558-201ENST00000301475 RTTNQ86VV8 2226 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 MUC3AQ02505 3323 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 WDR87Q6ZQQ6 2873 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 RP1P56715 2156 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 TRAV36DV7A0A075B6V5 113 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF727A8MUV8 499 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 BCAT2O15382 392 aaPredicted RBP9.62□□□□□ -0.87
ZNF558-201ENST00000301475 SCGNO76038 276 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 UTS2O95399 124 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 HLA-DOBP13765 273 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 AMY2BP19961 511 aa9.62□□□□□ -0.87
ZNF558-201ENST00000301475 RAB1AP62820 205 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms