RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 FAM166BA8MTA8 275 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 CYR61O00622 381 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 GPANK1O95872 356 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 GRPP07492 148 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 HLA-DOBP13765 273 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 RPS2P15880 293 aaKnown RBP17.3■□□□□ 0.36
TSR1-201ENST00000301364 RPA2P15927 270 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 H2BFWTQ7Z2G1 175 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 LSRQ86X29 649 aaPredicted RBP17.3■□□□□ 0.36
TSR1-201ENST00000301364 C2CD4CQ8TF44 421 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 FN3KRPQ9HA64 309 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 SSSCA1O60232 199 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 GCM2O75603 506 aaPredicted RBP17.3■□□□□ 0.36
TSR1-201ENST00000301364 CDC20BQ86Y33 519 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 SLC38A6Q8IZM9 456 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 BATF2Q8N1L9 274 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 OR4D9Q8NGE8 314 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 RDH5Q92781 318 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 MIA3Q5JRA6 1907 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 TGOLN2O43493 480 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 DUS4LO95620 317 aaKnown RBP17.3■□□□□ 0.36
TSR1-201ENST00000301364 GALNSP34059 522 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 TMEM41BQ5BJD5 291 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 TMEM88Q6PEY1 159 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 ZNF784Q8NCA9 323 aaPredicted RBP17.3■□□□□ 0.36
TSR1-201ENST00000301364 HGDQ93099 445 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 LIN37Q96GY3 246 aaPredicted RBP17.3■□□□□ 0.36
TSR1-201ENST00000301364 CCDC74BQ96LY2 380 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 LANCL2Q9NS86 450 aa17.3■□□□□ 0.36
TSR1-201ENST00000301364 COL11A1P12107 1806 aaPredicted RBP17.3■□□□□ 0.36
TSR1-201ENST00000301364 C9orf170A2RU37 121 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 NTN1O95631 604 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 CST4P01036 141 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 ARL3P36405 182 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 KISS1Q15726 138 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 FAHD2BQ6P2I3 314 aaPredicted RBP17.29■□□□□ 0.36
TSR1-201ENST00000301364 OR1L3Q8NH93 324 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 FAHD2AQ96GK7 314 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 PRRX2Q99811 253 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 TWSG1Q9GZX9 223 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 IGHV3-15A0A0B4J1V0 119 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 CATSPERDQ86XM0 798 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 ZDHHC23Q8IYP9 409 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 SCMH1Q96GD3 660 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 FOXQ1Q9C009 403 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 ZNF391Q9UJN7 358 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 C5orf49A4QMS7 147 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 ZNF732B4DXR9 585 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 SH2D1BO14796 132 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 SFT2D2O95562 160 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 CXCL3P19876 107 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 DRAM2Q6UX65 266 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 NHLRC1Q6VVB1 395 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 Q7L0L9 218 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 SFTPA1Q8IWL2 248 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 ZNF561Q8N587 486 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 IP6K3Q96PC2 410 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 MOSPD3O75425 235 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 SELENOPP49908 381 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 HAGHQ16775 308 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 PLA1AQ53H76 456 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 FRRS1LQ9P0K9 344 aa17.29■□□□□ 0.36
TSR1-201ENST00000301364 TNFSF11O14788 317 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 B4GALT1P15291 398 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 S100A7AQ86SG5 101 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 LIN7CQ9NUP9 197 aaKnown RBP17.28■□□□□ 0.36
TSR1-201ENST00000301364 TRPM6Q9BX84 2022 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 POLR2AP24928 1970 aaKnown RBP17.28■□□□□ 0.36
TSR1-201ENST00000301364 PRSS44E7EML9 344 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 WDR1O75083 606 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 LIMS1P48059 325 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 HSD17B13Q7Z5P4 300 aaPredicted RBP17.28■□□□□ 0.36
TSR1-201ENST00000301364 ARHGAP5-AS1Q96IT6 56 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 KLF13Q9Y2Y9 288 aaPredicted RBP17.28■□□□□ 0.36
TSR1-201ENST00000301364 MAP1BP46821 2468 aaKnown RBP17.28■□□□□ 0.36
TSR1-201ENST00000301364 A0A1W2PQD3 144 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 MPC2O95563 127 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 FUT3P21217 361 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 ELLP55199 621 aaPredicted RBP17.28■□□□□ 0.36
TSR1-201ENST00000301364 CLDN15P56746 228 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 DAZAP1Q96EP5 407 aaKnown RBP17.28■□□□□ 0.36
TSR1-201ENST00000301364 DUSP13Q9UII6 198 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 WNK3Q9BYP7 1800 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 IGHV1OR21-1A0A087WYE8 117 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 PTGFRP43088 359 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 KLF9Q13886 244 aaPredicted RBP17.28■□□□□ 0.36
TSR1-201ENST00000301364 TMEM92Q6UXU6 159 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 TDHQ8IZJ6 230 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 OR5M8Q8NGP6 311 aa17.28■□□□□ 0.36
TSR1-201ENST00000301364 DSPPQ9NZW4 1301 aa17.27■□□□□ 0.36
TSR1-201ENST00000301364 EFSO43281 561 aa17.27■□□□□ 0.36
TSR1-201ENST00000301364 GREM1O60565 184 aa17.27■□□□□ 0.36
TSR1-201ENST00000301364 SCGB1D1O95968 90 aa17.27■□□□□ 0.36
TSR1-201ENST00000301364 RRASP10301 218 aa17.27■□□□□ 0.36
TSR1-201ENST00000301364 B3GNTL1Q67FW5 361 aaPredicted RBP17.27■□□□□ 0.36
TSR1-201ENST00000301364 OR1F12Q8NHA8 337 aa17.27■□□□□ 0.36
TSR1-201ENST00000301364 OR2V1Q8NHB1 315 aa17.27■□□□□ 0.36
TSR1-201ENST00000301364 ZNF768Q9H5H4 540 aaKnown RBP17.27■□□□□ 0.36
TSR1-201ENST00000301364 MMP26Q9NRE1 261 aa17.27■□□□□ 0.36
TSR1-201ENST00000301364 GNG13Q9P2W3 67 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms