RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 FZR1Q9UM11 496 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 ANKRD34BA5PLL1 514 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 ZNF593O00488 134 aaPredicted RBP14.39□□□□□ -0.11
SDCBP-201ENST00000260130 NDUFS7O75251 213 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 NGFP01138 241 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 GALP22466 123 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 RIN1Q13671 783 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 KLHL12Q53G59 568 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 AADACL4Q5VUY2 407 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 LRP11Q86VZ4 500 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 ZFP41Q8N8Y5 198 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 GRPEL2Q8TAA5 225 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 ABHD4Q8TB40 342 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 MAP6Q96JE9 813 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 ATF6BQ99941 703 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 SYT3Q9BQG1 590 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 TMED9Q9BVK6 235 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 H2AFY2Q9P0M6 372 aaPredicted RBP14.39□□□□□ -0.11
SDCBP-201ENST00000260130 GABRPO00591 440 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 HPGDSO60760 199 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 ABHD16AO95870 558 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 IGHA1P01876 353 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 SPARCP09486 303 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 ZNF250P15622 560 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 HTR1FP30939 366 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 CAV3P56539 151 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 IL18Q14116 193 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 TCTE3Q8IZS6 198 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 DUSP18Q8NEJ0 188 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 WFDC11Q8NEX6 87 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 SYNPRQ8TBG9 265 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 JAM3Q9BX67 310 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 RTTNQ86VV8 2226 aa14.38□□□□□ -0.11
SDCBP-201ENST00000260130 IGHV4-39P01824 125 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 DBHP09172 617 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 PSKH1P11801 424 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 CELP19835 753 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 ATP6V1E1P36543 226 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 INPP1P49441 399 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 SELENOVP59797 346 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 ECH1Q13011 328 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 SLC35D3Q5M8T2 416 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 RFPL4BQ6ZWI9 263 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 BBS1Q8NFJ9 593 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 TRIM63Q969Q1 353 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 ZMYND19Q96E35 227 aaPredicted RBP14.37□□□□□ -0.11
SDCBP-201ENST00000260130 DCLRE1CQ96SD1 692 aaKnown RBP14.37□□□□□ -0.11
SDCBP-201ENST00000260130 INTS14Q96SY0 518 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 BARX1Q9HBU1 254 aaPredicted RBP14.37□□□□□ -0.11
SDCBP-201ENST00000260130 PNRC2Q9NPJ4 139 aaKnown RBP14.37□□□□□ -0.11
SDCBP-201ENST00000260130 ARID1AO14497 2285 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 A0A0B4J293 547 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 LALBAP00709 142 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 SLC2A5P22732 501 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 PPP1CBP62140 327 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 CD83Q01151 205 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 RSPO1Q2MKA7 263 aaPredicted RBP14.37□□□□□ -0.11
SDCBP-201ENST00000260130 DCXRQ7Z4W1 244 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 ACOT12Q8WYK0 555 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 MARS2Q96GW9 593 aaKnown RBP14.37□□□□□ -0.11
SDCBP-201ENST00000260130 FYTTD1Q96QD9 318 aaKnown RBP14.37□□□□□ -0.11
SDCBP-201ENST00000260130 VRK1Q99986 396 aaPredicted RBP14.37□□□□□ -0.11
SDCBP-201ENST00000260130 ITPR3Q14573 2671 aa14.37□□□□□ -0.11
SDCBP-201ENST00000260130 FAM240BA0A1B0GVZ2 78 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 LYRM1O43325 122 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 ERP29P30040 261 aaKnown RBP14.36□□□□□ -0.11
SDCBP-201ENST00000260130 PPOXP50336 477 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 KLF3P57682 345 aaPredicted RBP14.36□□□□□ -0.11
SDCBP-201ENST00000260130 RPS7P62081 194 aaKnown RBP14.36□□□□□ -0.11
SDCBP-201ENST00000260130 BDH1Q02338 343 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 TATDN3Q17R31 274 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 ZNF718Q3SXZ3 478 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 YIF1BQ5BJH7 314 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 SPATA46Q5T0L3 261 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 TGIF2LYQ8IUE0 185 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 TIGD4Q8IY51 512 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 OR6N2Q8NGY6 317 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 SLC25A40Q8TBP6 338 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 SPRYD4Q8WW59 207 aaPredicted RBP14.36□□□□□ -0.11
SDCBP-201ENST00000260130 TEAD3Q99594 435 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 OR2J1Q9GZK6 312 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 DYNLRB1Q9NP97 96 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 MYEF2Q9P2K5 600 aaKnown RBP14.36□□□□□ -0.11
SDCBP-201ENST00000260130 IGLV3-9A0A075B6K5 115 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 GCH1P30793 250 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 KRTAP27-1Q3LI81 207 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 ZNF322Q6U7Q0 402 aaPredicted RBP14.36□□□□□ -0.11
SDCBP-201ENST00000260130 DPY19L4Q7Z388 723 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 GID4Q8IVV7 300 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 OR10S1Q8NGN2 331 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 KLF14Q8TD94 323 aaPredicted RBP14.36□□□□□ -0.11
SDCBP-201ENST00000260130 BOLA1Q9Y3E2 137 aa14.36□□□□□ -0.11
SDCBP-201ENST00000260130 F5H5K5 113 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 M0R233 179 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 TUBG1P23258 451 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 EFNA4P52798 201 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 MADCAM1Q13477 382 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 P2RY14Q15391 338 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 ST7LQ8TDW4 575 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 ZNF649Q9BS31 505 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms