RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 GNMTQ14749 295 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SPICQ8N5J4 248 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SEMA6DQ8NFY4 1073 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 CRLF2Q9HC73 371 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 IGHV5-10-1A0A0J9YXX1 117 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 MS4A18H0YCH9 400 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SULT1C2O00338 296 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SIGLEC5O15389 551 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 RRASP10301 218 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SIGLEC14Q08ET2 396 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 KISS1Q15726 138 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 MS4A18Q3C1V0 323 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 NAXDQ8IW45 347 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 LINC00862A6NCI5 91 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SHOXO15266 292 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 CNOT4O95628 575 aaKnown RBP12.06□□□□□ -0.48
RAB3D-201ENST00000222120 CER1O95813 267 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 BPNT1O95861 308 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 ZNF14P17017 642 aaPredicted RBP12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SUMO3P55854 103 aaPredicted RBP12.06□□□□□ -0.48
RAB3D-201ENST00000222120 ZP1P60852 638 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 MALLQ13021 153 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 TERB2Q8NHR7 220 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 MAFAQ8NHW3 353 aaPredicted RBP12.06□□□□□ -0.48
RAB3D-201ENST00000222120 GFI1Q99684 422 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.06□□□□□ -0.48
RAB3D-201ENST00000222120 NOSIPQ9Y314 301 aaKnown RBP12.06□□□□□ -0.48
RAB3D-201ENST00000222120 HDGFL3Q9Y3E1 203 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 MED6O75586 246 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 DIRAS3O95661 229 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 VSIG8P0DPA2 414 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 CYB561P49447 251 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 RAB5BP61020 215 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SNTB1Q13884 538 aaKnown RBP12.06□□□□□ -0.48
RAB3D-201ENST00000222120 ARL6IP1Q15041 203 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 CNN3Q15417 329 aaKnown RBP12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SP6Q3SY56 376 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SECTM1Q8WVN6 248 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 SGCZQ96LD1 299 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 ZNF768Q9H5H4 540 aaKnown RBP12.06□□□□□ -0.48
RAB3D-201ENST00000222120 UCK1Q9HA47 277 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 WNT16Q9UBV4 365 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 KCNS2Q9ULS6 477 aa12.06□□□□□ -0.48
RAB3D-201ENST00000222120 TMEM200CA6NKL6 621 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 D6RAR5 112 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 TTRP02766 147 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 CCL3P10147 92 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 EDN3P14138 238 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 GLRA1P23415 457 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 HOXC12P31275 282 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 RGS19P49795 217 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 EXT1Q16394 746 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 ACOT7LQ6ZUV0 252 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 C6orf201Q7Z4U5 140 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 NAA40Q86UY6 237 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 OR5L1Q8NGL2 311 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 GPX8Q8TED1 209 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 LIPHQ8WWY8 451 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 GPR137Q96N19 417 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 GDF15Q99988 308 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 BORCS7-ASMTA0A0B4J1R7 106 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 OR2M5A3KFT3 312 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 K7EPK0 472 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 OR8U9P0C7N5 309 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 H2BFSP57053 126 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 FAM71E2Q8N5Q1 922 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 TMEM104Q8NE00 496 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 NUBPLQ8TB37 319 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 THOC3Q96J01 351 aaKnown RBP12.05□□□□□ -0.48
RAB3D-201ENST00000222120 SYT3Q9BQG1 590 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 PRMT8Q9NR22 394 aaPredicted RBP12.05□□□□□ -0.48
RAB3D-201ENST00000222120 LOC105371267A0A1B0GV96 52 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 A6NLC8 198 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 RFPL4AA6NLU0 287 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 RFPL4AL1F8VTS6 287 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 DEGS2Q6QHC5 323 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 WDR74Q6RFH5 385 aaPredicted RBP12.05□□□□□ -0.48
RAB3D-201ENST00000222120 CDH26Q8IXH8 852 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 CNTNAP3BQ96NU0 1288 aa12.05□□□□□ -0.48
RAB3D-201ENST00000222120 RAB6AP20340 208 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 CAMLGP49069 296 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 HNF4GQ14541 408 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 CEACAM16Q2WEN9 425 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 KRBOX4Q5JUW0 171 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 RNF133Q8WVZ7 376 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 SOX7Q9BT81 388 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 RAMP1O60894 148 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 ABHD16AO95870 558 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 CPN1P15169 458 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 DUSP1P28562 367 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 CFHR1Q03591 330 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 SHBQ15464 509 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 C2orf68Q2NKX9 166 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 ZFP82Q8N141 532 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 LRRC75AQ8NAA5 344 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 C2CD4CQ8TF44 421 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 ZNF285Q96NJ3 590 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 ZNF385AQ96PM9 386 aaKnown RBP12.04□□□□□ -0.48
RAB3D-201ENST00000222120 C12orf49Q9H741 205 aa12.04□□□□□ -0.48
RAB3D-201ENST00000222120 BIN3Q9NQY0 253 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms