RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 POU3F4P49335 361 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 PLA2G7Q13093 441 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 PGAP1Q75T13 922 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CD163Q86VB7 1156 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 ZNF584Q8IVC4 421 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR6M1Q8NGM8 313 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 AKAP1Q92667 903 aaKnown RBP eCLIP17.1■□□□□ 0.331e-6■□□□□ 10.5
TNFRSF1A-201ENST00000162749 RHBDD3Q9Y3P4 386 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 WDR1O75083 606 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TOXO94900 526 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CNOT4O95628 575 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 COX5BP10606 129 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 GDNFP39905 211 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TDGF1P3P51864 188 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 C1orf100Q5SVJ3 147 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 LIX1LQ8IVB5 337 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 REEP6Q96HR9 211 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 C1QTNF5Q9BXJ0 243 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 KCNK15Q9H427 330 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 FIGNL2A6NMB9 653 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 MTRF1O75570 445 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 FAHP16930 419 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 STOMP27105 288 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 PTH2RP49190 550 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CCR6P51684 374 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 ART1P52961 327 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 PER3P56645 1201 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 C2orf76Q3KRA6 126 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR5AS1Q8N127 324 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CISD2Q8N5K1 135 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 FOXRED1Q96CU9 486 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 HAVCR1Q96D42 359 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 GHITMQ9H3K2 345 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 NUBP2Q9Y5Y2 271 aa17.09■□□□□ 0.33
TNFRSF1A-201ENST00000162749 C7orf66A4D0T2 115 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 MT-ND4P03905 459 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CCL2P13500 99 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 S100A1P23297 94 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TGFBR3Q03167 851 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 GSG1Q2KHT4 349 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 COLCA1Q6ZS62 124 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 RPRMLQ8N4K4 120 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR4D6Q8NGJ1 314 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 RAB40AQ8WXH6 277 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SORCS2Q96PQ0 1159 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TMEM246Q9BRR3 403 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CACNG6Q9BXT2 260 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 METTL17Q9H7H0 456 aaPredicted RBP17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CNTD2Q9H8S5 307 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 PIGLQ9Y2B2 252 aa17.08■□□□□ 0.33
TNFRSF1A-201ENST00000162749 LOC100289279A0A1B0GTE1 492 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 C5orf49A4QMS7 147 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 C1QTNF9BB2RNN3 333 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 RAD51DO75771 328 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 LYZL6O75951 148 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 C1QTNF9P0C862 333 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 EDN3P14138 238 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ACKR3P25106 362 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 SNTB2Q13425 540 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 DYRK1AQ13627 763 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 LINC00303Q3SY05 128 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 DPPA2Q7Z7J5 298 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CCDC54Q8NEL0 328 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 OR52I2Q8NH67 350 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 S100A16Q96FQ6 103 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PLSCR4Q9NRQ2 329 aa17.08■□□□□ 0.32
TNFRSF1A-201ENST00000162749 IGKV1-9A0A0C4DH69 117 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ERCC1P07992 297 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 TMIGD3P0DMS9 266 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CCNOP22674 350 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PTGER4P35408 488 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 GZMKP49863 264 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 EFNB2P52799 333 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 NANOS1Q8WY41 292 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 C10orf35Q96D05 121 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 SPACA5Q96QH8 159 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 C7orf50Q9BRJ6 194 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CHST5Q9GZS9 411 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ING3Q9NXR8 418 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 MRPL15Q9P015 296 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 RABL2AQ9UBK7 228 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ZNF391Q9UJN7 358 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 RABL2BQ9UNT1 228 aa17.07■□□□□ 0.32
TNFRSF1A-201ENST00000162749 TMEM272A0A1B0GTI8 110 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 DHRS7CA6NNS2 312 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 SMLR1H3BR10 107 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 DHFRP00374 187 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 C1QBP02746 253 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PTHLHP12272 177 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 COX5AP20674 150 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 THBS4P35443 961 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PRSS12P56730 875 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ZNF92Q03936 586 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 TNK1Q13470 666 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 DMRTC1Q5HYR2 192 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 THOC7Q6I9Y2 204 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 RNF144BQ7Z419 303 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 GABRG1Q8N1C3 465 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ASCC1Q8N9N2 400 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 NAXEQ8NCW5 288 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms