RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Actc1P68033 377 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Acta1P68134 377 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Serpine2Q07235 397 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gm17324Q8C6J8 137 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 MmabQ9D273 237 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Bpnt1Q9Z0S1 308 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Rasgef1aA0A0N4SVR5 498 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gm2022A0A1Y7VLT7 144 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr1066A2AK62 313 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Zfp988F6VKC7 633 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Zfp989H3BLB0 661 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gm21411J3KMS0 136 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gm2075J3QMW5 144 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Itln1O88310 313 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Lmx1bO88609 395 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Hsd11b1P50172 292 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 S100a11P50543 98 aaKnown RBP20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Smad5P97454 465 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Zfp987Q32P14 633 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 BB287469Q3UT53 144 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr1287Q7TQY1 305 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr1115Q7TR53 326 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Fbxo5Q7TSG3 421 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Rxfp3Q8BGE9 472 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Raf1Q99N57 648 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Eif1bQ9CXU9 113 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Rab3bQ9CZT8 219 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Alg5Q9DB25 324 aa20.26■□□□□ 0.83
Upf3a-201ENSMUST00000043767 4930433I11RikA0A0U1RPT6 723 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Igkv6-23A0A140T8N5 115 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr1084A0A1L1STZ9 313 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr1082A0A1L1SUC9 313 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Lao1B1ARV3 523 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Scgb2b3D2XZ38 112 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gm10112D3YWP5 117 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Hprt1P00493 218 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Rap1aP62835 184 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Q80Y39 304 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Coro2bQ8BH44 480 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 TigarQ8BZA9 269 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gm11541Q8C4D8 108 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 4921517D22RikQ8CET0 269 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Ripply3Q924S9 152 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Rap1bQ99JI6 184 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 AspnQ99MQ4 373 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gabra4Q9D6F4 552 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Uchl1Q9R0P9 223 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Hacd4A2AKM2 232 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr1029A2ATE0 324 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gm15446D3Z5Y8 553 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr655E9Q252 308 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr370E9Q848 314 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Ankrd65F6YK91 380 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 CtdsplP58465 276 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Zglp1Q1WG82 266 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 ElaneQ3UP87 265 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Lrrn1Q61809 716 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Lcn3Q62471 182 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 ToxQ66JW3 526 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Slc6a7Q6PGE7 637 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr1028Q7TR89 324 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Tbl1xr1Q8BHJ5 514 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Rcc2Q8BK67 520 aaKnown RBP20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr1497Q8VG11 314 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Dcp1aQ91YD3 602 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Emc3Q99KI3 261 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Icam4Q9ERM2 262 aa20.25■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Trav10nA0A075B622 114 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Trav10A0A075B642 114 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Trav12-2A0N8N6 114 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gm266A6H634 200 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 MsmpB1AWI6 139 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Plscr5J3QM92 274 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Raet1aO08602 253 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Raet1bO08603 253 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 P2rx6O54803 389 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Itga5P11688 1053 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Camk2aP11798 478 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Vmn1r220Q8R272 298 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr1504Q8VFQ4 315 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Coq5Q9CXI0 327 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Cmss1Q9CZT6 276 aaKnown RBP20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Pip4p2Q9CZX7 257 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Actr6Q9D864 396 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Ctag2Q9D9S4 219 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 PtprbB2RU80 1998 aa20.24■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Olfr1493-ps1A0A140LHU2 316 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gm12666A2AMD0 254 aaKnown RBP20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Vmn1r152E9Q9N3 307 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Vmn1r104L7N293 307 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Dyrk1aQ61214 763 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Tmed3Q78IS1 221 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Adhfe1Q8R0N6 465 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Tmcc3Q8R310 477 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gatad2bQ8VHR5 594 aaKnown RBP20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 1700020A23RikQ9DA59 131 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 RhouQ9EQT3 261 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Aadacl3A2A7Z8 408 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Kdf1A2A9F4 397 aa20.23■□□□□ 0.83
Upf3a-201ENSMUST00000043767 Gpr155A2AWR3 868 aa20.23■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms