RNA–Protein interactions for RNA: snR62

snR62, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR62, Length 100 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR62	snR62	YHR112C	P38716	378 aa		0.7	□□□□□ -2.3
snR62	snR62	CCM1	P48237	864 aa	Predicted RBP	0.7	□□□□□ -2.3
snR62	snR62	MTR3	P48240	250 aa	Predicted RBP	0.7	□□□□□ -2.3
snR62	snR62	CLF1	Q12309	687 aa	Predicted RBP	0.7	□□□□□ -2.3
snR62	snR62	PRC1	P00729	532 aa		0.69	□□□□□ -2.3
snR62	snR62	YMR085W	P0CF18	432 aa		0.69	□□□□□ -2.3
snR62	snR62	YEL076C-A	P0CX16	216 aa		0.69	□□□□□ -2.3
snR62	snR62	YLR464W	P0CX17	216 aa		0.69	□□□□□ -2.3
snR62	snR62	TOP3	P13099	656 aa		0.69	□□□□□ -2.3
snR62	snR62	ERG6	P25087	383 aa	Known RBP	0.69	□□□□□ -2.3
snR62	snR62	PET112	P33893	541 aa		0.69	□□□□□ -2.3
snR62	snR62	CRP1	P38845	465 aa	Known RBP	0.69	□□□□□ -2.3
snR62	snR62	YEL076C	P39971	216 aa		0.69	□□□□□ -2.3
snR62	snR62	YIL024C	P40543	189 aa		0.69	□□□□□ -2.3
snR62	snR62	YGL117W	P53133	265 aa		0.69	□□□□□ -2.3
snR62	snR62	YDR179W-A	Q03983	463 aa		0.69	□□□□□ -2.3
snR62	snR62	SPR28	Q04921	423 aa		0.69	□□□□□ -2.3
snR62	snR62	YDL086W	Q07505	273 aa		0.69	□□□□□ -2.3
snR62	snR62	MSC6	Q08818	692 aa	Known RBP	0.69	□□□□□ -2.3
snR62	snR62	CSR2	Q12734	1121 aa		0.69	□□□□□ -2.3
snR62	snR62	HRP1	Q99383	534 aa	Known RBP	0.69	□□□□□ -2.3
snR62	snR62	LEU2	P04173	364 aa	Predicted RBP	0.68	□□□□□ -2.3
snR62	snR62	YCR043C	P25361	127 aa		0.68	□□□□□ -2.3
snR62	snR62	AAR2	P32357	355 aa	Predicted RBP	0.68	□□□□□ -2.3
snR62	snR62	MTG2	P38860	518 aa		0.68	□□□□□ -2.3
snR62	snR62	PRP31	P49704	494 aa	Predicted RBP	0.68	□□□□□ -2.3
snR62	snR62	HOS2	P53096	452 aa	Predicted RBP	0.68	□□□□□ -2.3
snR62	snR62	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	0.68	□□□□□ -2.3	not detected
snR62	snR62	YPT1	P01123	206 aa	Known RBP	0.67	□□□□□ -2.3
snR62	snR62	AQY1	P0CD91	305 aa		0.67	□□□□□ -2.3
snR62	snR62	TRZ1	P36159	838 aa	Predicted RBP	0.67	□□□□□ -2.3
snR62	snR62	MRPL4	P36517	319 aa		0.67	□□□□□ -2.3
snR62	snR62	TOK1	P40310	691 aa		0.67	□□□□□ -2.3
snR62	snR62	TES1	P41903	349 aa	Known RBP	0.67	□□□□□ -2.3
snR62	snR62	YBP2	P53169	641 aa		0.67	□□□□□ -2.3
snR62	snR62	VPS16	Q03308	798 aa		0.67	□□□□□ -2.3
snR62	snR62	CDC34	P14682	295 aa		0.66	□□□□□ -2.3
snR62	snR62	APL3	P38065	1025 aa		0.66	□□□□□ -2.3
snR62	snR62	APD1	P38281	316 aa		0.66	□□□□□ -2.3
snR62	snR62	RRT2	P38332	387 aa		0.66	□□□□□ -2.3
snR62	snR62	SIM1	P40472	476 aa		0.66	□□□□□ -2.3
snR62	snR62	YIR016W	P40572	265 aa		0.66	□□□□□ -2.3
snR62	snR62	OPT1	P40897	799 aa		0.66	□□□□□ -2.3
snR62	snR62	BST1	P43571	1029 aa		0.66	□□□□□ -2.3
snR62	snR62	ATG36	P46983	293 aa		0.66	□□□□□ -2.3
snR62	snR62	SHE10	P53075	577 aa		0.66	□□□□□ -2.3
snR62	snR62	CPR8	P53728	308 aa		0.66	□□□□□ -2.3
snR62	snR62	BOP3	P53958	396 aa		0.66	□□□□□ -2.3
snR62	snR62	NGL2	Q03264	515 aa	Known RBP	0.66	□□□□□ -2.3
snR62	snR62	BUL2	Q03758	920 aa	Known RBP	0.66	□□□□□ -2.3
snR62	snR62	AIM44	Q99299	758 aa		0.66	□□□□□ -2.3
snR62	snR62	HEM1	P09950	548 aa	Predicted RBP	0.65	□□□□□ -2.31
snR62	snR62	ADE2	P21264	571 aa	Known RBP	0.65	□□□□□ -2.31
snR62	snR62	REC104	P33323	182 aa		0.65	□□□□□ -2.31
snR62	snR62	GET2	P40056	285 aa		0.65	□□□□□ -2.31
snR62	snR62	YIL152W	P40455	235 aa		0.65	□□□□□ -2.31
snR62	snR62	MDV1	P47025	714 aa		0.65	□□□□□ -2.31
snR62	snR62	NOG2	P53742	486 aa	Known RBP	0.65	□□□□□ -2.31
snR62	snR62	RPL15B	P54780	204 aa	Predicted RBP	0.65	□□□□□ -2.31
snR62	snR62	ESF1	Q06344	628 aa	Known RBP	0.65	□□□□□ -2.31
snR62	snR62	THI21	Q08975	551 aa		0.65	□□□□□ -2.31
snR62	snR62	RKI1	Q12189	258 aa		0.65	□□□□□ -2.31
snR62	snR62	PMA2	P19657	947 aa		0.64	□□□□□ -2.31
snR62	snR62	DAL7	P21826	554 aa		0.64	□□□□□ -2.31
snR62	snR62	YCL002C	P25565	263 aa		0.64	□□□□□ -2.31
snR62	snR62	APL2	P36000	726 aa	Predicted RBP	0.64	□□□□□ -2.31
snR62	snR62	YEL068C	P39977	110 aa		0.64	□□□□□ -2.31
snR62	snR62	SIT1	P39980	628 aa		0.64	□□□□□ -2.31
snR62	snR62	DIP5	P53388	608 aa		0.64	□□□□□ -2.31
snR62	snR62	RAD18	P10862	487 aa		0.63	□□□□□ -2.31
snR62	snR62	AIM17	P23180	465 aa	Known RBP	0.63	□□□□□ -2.31
snR62	snR62	BCS1	P32839	456 aa		0.63	□□□□□ -2.31
snR62	snR62	RPC34	P32910	317 aa		0.63	□□□□□ -2.31
snR62	snR62	GND1	P38720	489 aa	Known RBP	0.63	□□□□□ -2.31
snR62	snR62	MET10	P39692	1035 aa		0.63	□□□□□ -2.31
snR62	snR62	VRG4	P40107	337 aa		0.63	□□□□□ -2.31
snR62	snR62	CFD1	P40558	293 aa		0.63	□□□□□ -2.31
snR62	snR62	YJL043W	P47053	257 aa		0.63	□□□□□ -2.31
snR62	snR62	COP1	P53622	1201 aa	Known RBP	0.63	□□□□□ -2.31
snR62	snR62	IMP4	P53941	290 aa	Known RBP	0.63	□□□□□ -2.31
snR62	snR62	ARG5,6	Q01217	863 aa		0.63	□□□□□ -2.31
snR62	snR62	LRS4	Q04087	347 aa	Known RBP	0.63	□□□□□ -2.31
snR62	snR62	LCD1	Q04377	747 aa		0.63	□□□□□ -2.31
snR62	snR62	YLR111W	Q12528	110 aa		0.63	□□□□□ -2.31
snR62	snR62	PEX1	P24004	1043 aa		0.62	□□□□□ -2.31
snR62	snR62	PPZ1	P26570	692 aa		0.62	□□□□□ -2.31
snR62	snR62	APT2	P36973	181 aa		0.62	□□□□□ -2.31
snR62	snR62	STM1	P39015	273 aa	Known RBP	0.62	□□□□□ -2.31
snR62	snR62	YSH1	Q06224	779 aa	Predicted RBP	0.62	□□□□□ -2.31
snR62	snR62	BSP1	Q06604	576 aa		0.62	□□□□□ -2.31
snR62	snR62	IZH3	Q07959	543 aa		0.62	□□□□□ -2.31
snR62	snR62	DSE3	Q08729	430 aa		0.62	□□□□□ -2.31
snR62	snR62	ENV7	Q12003	364 aa		0.62	□□□□□ -2.31
snR62	snR62	RPL7A	P05737	244 aa	Known RBP	0.61	□□□□□ -2.31
snR62	snR62	RPS9B	P05755	195 aa	Known RBP	0.61	□□□□□ -2.31
snR62	snR62	PRP28	P23394	588 aa		0.61	□□□□□ -2.31
snR62	snR62	SBA1	P28707	216 aa	Known RBP	0.61	□□□□□ -2.31
snR62	snR62	CTP1	P38152	299 aa		0.61	□□□□□ -2.31
snR62	snR62	RIM4	P38741	713 aa		0.61	□□□□□ -2.31
snR62	snR62	FYV10	P40492	516 aa		0.61	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms