RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W MND2P40577 368 aa2.3□□□□□ -2.04
HSH155YMR288W SHR5P41912 237 aa2.3□□□□□ -2.04
HSH155YMR288W UBP6P43593 499 aaKnown RBP2.3□□□□□ -2.04
HSH155YMR288W HSV2P50079 448 aaPredicted RBP2.3□□□□□ -2.04
HSH155YMR288W ACK1Q07622 623 aaPredicted RBP2.3□□□□□ -2.04
HSH155YMR288W TPO1Q07824 586 aa2.3□□□□□ -2.04
HSH155YMR288W YDL177CQ12257 170 aa2.3□□□□□ -2.04
HSH155YMR288W YLR358CO13565 187 aa2.29□□□□□ -2.04
HSH155YMR288W TOA1P32773 286 aa2.29□□□□□ -2.04
HSH155YMR288W TOD6P34219 525 aa2.29□□□□□ -2.04
HSH155YMR288W TSL1P38427 1098 aaKnown RBP2.29□□□□□ -2.04
HSH155YMR288W DSS1P39112 969 aa2.29□□□□□ -2.04
HSH155YMR288W AIM21P40563 679 aa2.29□□□□□ -2.04
HSH155YMR288W NOG2P53742 486 aaKnown RBP2.29□□□□□ -2.04
HSH155YMR288W YPL277CQ08989 487 aa2.29□□□□□ -2.04
HSH155YMR288W RRG1Q12167 365 aaPredicted RBP2.29□□□□□ -2.04
HSH155YMR288W NUP145P49687 1317 aa2.29□□□□□ -2.04
HSH155YMR288W SOD2P00447 233 aa2.29□□□□□ -2.04
HSH155YMR288W SPE1P08432 466 aa2.29□□□□□ -2.04
HSH155YMR288W PFK2P16862 959 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
HSH155YMR288W SPE2P21182 396 aa2.29□□□□□ -2.04
HSH155YMR288W RAD53P22216 821 aa2.29□□□□□ -2.04
HSH155YMR288W SED4P25365 1065 aa2.29□□□□□ -2.04
HSH155YMR288W SFP1P32432 683 aa2.29□□□□□ -2.04
HSH155YMR288W TIM23P32897 222 aa2.29□□□□□ -2.04
HSH155YMR288W NMD2P38798 1089 aaKnown RBP2.29□□□□□ -2.04
HSH155YMR288W MTC3P53077 123 aa2.29□□□□□ -2.04
HSH155YMR288W AUS1Q08409 1394 aa2.29□□□□□ -2.04
HSH155YMR288W RRP14P36080 434 aaKnown RBP2.28□□□□□ -2.04
HSH155YMR288W ABZ1P37254 787 aaPredicted RBP2.28□□□□□ -2.04
HSH155YMR288W YIL108WP40483 696 aaKnown RBP2.28□□□□□ -2.04
HSH155YMR288W ZDS1P50111 915 aaKnown RBP2.28□□□□□ -2.04
HSH155YMR288W RNH70P53331 553 aa2.28□□□□□ -2.04
HSH155YMR288W PRC1P00729 532 aa2.28□□□□□ -2.04
HSH155YMR288W NPP1P25353 742 aa2.28□□□□□ -2.04
HSH155YMR288W EMC1P25574 760 aa2.28□□□□□ -2.04
HSH155YMR288W NGG1P32494 702 aa2.28□□□□□ -2.04
HSH155YMR288W TYE7P33122 291 aaPredicted RBP2.28□□□□□ -2.04
HSH155YMR288W YHR020WP38708 688 aaKnown RBP2.28□□□□□ -2.04
HSH155YMR288W TAT2P38967 592 aa2.28□□□□□ -2.04
HSH155YMR288W GSF2Q04697 403 aaKnown RBP2.28□□□□□ -2.04
HSH155YMR288W CRF1Q04930 467 aa2.28□□□□□ -2.04
HSH155YMR288W CDA2Q06703 312 aa2.28□□□□□ -2.04
HSH155YMR288W TOP3P13099 656 aa2.28□□□□□ -2.05
HSH155YMR288W CAD1P24813 409 aaKnown RBP2.28□□□□□ -2.05
HSH155YMR288W STE13P33894 931 aa2.28□□□□□ -2.05
HSH155YMR288W EMC3P36039 253 aa2.28□□□□□ -2.05
HSH155YMR288W ERG7P38604 731 aa2.28□□□□□ -2.05
HSH155YMR288W RPN10P38886 268 aaKnown RBP2.28□□□□□ -2.05
HSH155YMR288W YTA12P40341 825 aa2.28□□□□□ -2.05
HSH155YMR288W GCV2P49095 1034 aa2.28□□□□□ -2.05
HSH155YMR288W RTA1P53047 317 aa2.28□□□□□ -2.05
HSH155YMR288W GIS1Q03833 894 aa2.28□□□□□ -2.05
HSH155YMR288W SUT2Q12286 268 aa2.28□□□□□ -2.05
HSH155YMR288W HIS5P07172 385 aa2.27□□□□□ -2.05
HSH155YMR288W CIT2P08679 460 aa2.27□□□□□ -2.05
HSH155YMR288W DAL7P21826 554 aa2.27□□□□□ -2.05
HSH155YMR288W URA1P28272 314 aaPredicted RBP2.27□□□□□ -2.05
HSH155YMR288W CYS3P31373 394 aaKnown RBP2.27□□□□□ -2.05
HSH155YMR288W NAB3P38996 802 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
HSH155YMR288W GDH3P39708 457 aa2.27□□□□□ -2.05
HSH155YMR288W TAF1P46677 1066 aa2.27□□□□□ -2.05
HSH155YMR288W RSC3Q06639 885 aa2.27□□□□□ -2.05
HSH155YMR288W CDA1Q06702 301 aa2.27□□□□□ -2.05
HSH155YMR288W BRE1Q07457 700 aaKnown RBP2.27□□□□□ -2.05
HSH155YMR288W NOP12Q08208 459 aaKnown RBP2.27□□□□□ -2.05
HSH155YMR288W ALE1Q08548 619 aa2.27□□□□□ -2.05
HSH155YMR288W RIB2Q12362 591 aaKnown RBP2.27□□□□□ -2.05
HSH155YMR288W DIF1O13577 133 aa2.27□□□□□ -2.05
HSH155YMR288W ERR1P0CX10 437 aa2.27□□□□□ -2.05
HSH155YMR288W ERR2P0CX11 437 aa2.27□□□□□ -2.05
HSH155YMR288W PRP6P19735 899 aaPredicted RBP2.27□□□□□ -2.05
HSH155YMR288W RPS7AP26786 190 aaKnown RBP2.27□□□□□ -2.05
HSH155YMR288W YBR238CP38330 731 aaKnown RBP2.27□□□□□ -2.05
HSH155YMR288W DOT6P40059 670 aaKnown RBP2.27□□□□□ -2.05
HSH155YMR288W ALY2P47029 1046 aa2.27□□□□□ -2.05
HSH155YMR288W PLB2Q03674 706 aa2.27□□□□□ -2.05
HSH155YMR288W UTP14Q04500 899 aaKnown RBP2.27□□□□□ -2.05
HSH155YMR288W MET7Q08645 548 aa2.27□□□□□ -2.05
HSH155YMR288W SSP2Q08646 371 aa2.27□□□□□ -2.05
HSH155YMR288W ENV7Q12003 364 aa2.27□□□□□ -2.05
HSH155YMR288W SWM1Q12379 170 aa2.27□□□□□ -2.05
HSH155YMR288W TUS1Q06412 1307 aa2.27□□□□□ -2.05
HSH155YMR288W PEX6P33760 1030 aa2.26□□□□□ -2.05
HSH155YMR288W BET3P36149 193 aa2.26□□□□□ -2.05
HSH155YMR288W MPT5P39016 859 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
HSH155YMR288W MET12P46151 657 aa2.26□□□□□ -2.05
HSH155YMR288W MCM6P53091 1017 aaKnown RBP2.26□□□□□ -2.05
HSH155YMR288W ZDS2P54786 942 aa2.26□□□□□ -2.05
HSH155YMR288W YKR011CQ02209 353 aa2.26□□□□□ -2.05
HSH155YMR288W RMT2Q03305 412 aa2.26□□□□□ -2.05
HSH155YMR288W YAP6Q03935 383 aa2.26□□□□□ -2.05
HSH155YMR288W YLR224WQ05947 369 aa2.26□□□□□ -2.05
HSH155YMR288W PSF3Q12146 194 aa2.26□□□□□ -2.05
HSH155YMR288W CCH1P50077 2039 aa2.26□□□□□ -2.05
HSH155YMR288W STO1P34160 861 aaKnown RBP2.26□□□□□ -2.05
HSH155YMR288W TOM20P35180 183 aa2.26□□□□□ -2.05
HSH155YMR288W SET5P38890 526 aaKnown RBP2.26□□□□□ -2.05
HSH155YMR288W PMC1P38929 1173 aaPredicted RBP2.26□□□□□ -2.05
HSH155YMR288W PZF1P39933 429 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms