RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W ORC4P54791 529 aa1.73□□□□□ -2.13
SLX4YLR135W GPD1Q00055 391 aaKnown RBP1.73□□□□□ -2.13
SLX4YLR135W SLU7Q02775 382 aaKnown RBP1.73□□□□□ -2.13
SLX4YLR135W CEF1Q03654 590 aaPredicted RBP1.73□□□□□ -2.13
SLX4YLR135W ROT1Q03691 256 aa1.73□□□□□ -2.13
SLX4YLR135W YHM2Q04013 314 aa1.73□□□□□ -2.13
SLX4YLR135W MCM21Q06675 368 aa1.73□□□□□ -2.13
SLX4YLR135W YPR027CQ12079 277 aa1.73□□□□□ -2.13
SLX4YLR135W NTO1Q12311 748 aa1.73□□□□□ -2.13
SLX4YLR135W SWM1Q12379 170 aa1.73□□□□□ -2.13
SLX4YLR135W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SLX4YLR135W TRM11Q12463 433 aa1.73□□□□□ -2.13
SLX4YLR135W KCS1Q12494 1050 aa1.73□□□□□ -2.13
SLX4YLR135W RPS21BQ3E754 87 aaKnown RBP1.73□□□□□ -2.13
SLX4YLR135W YLR415CO13578 112 aa1.72□□□□□ -2.13
SLX4YLR135W ACO1P19414 778 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
SLX4YLR135W PRP4P20053 465 aaKnown RBP1.72□□□□□ -2.13
SLX4YLR135W SEC65P29478 273 aa1.72□□□□□ -2.13
SLX4YLR135W DAL3P32459 195 aa1.72□□□□□ -2.13
SLX4YLR135W HIR1P32479 840 aa1.72□□□□□ -2.13
SLX4YLR135W TMT1P32643 299 aa1.72□□□□□ -2.13
SLX4YLR135W SER1P33330 395 aaKnown RBP1.72□□□□□ -2.13
SLX4YLR135W NIC96P34077 839 aa1.72□□□□□ -2.13
SLX4YLR135W YKR075CP36155 307 aa1.72□□□□□ -2.13
SLX4YLR135W YBR259WP38338 688 aa1.72□□□□□ -2.13
SLX4YLR135W SAK1P38990 1142 aa1.72□□□□□ -2.13
SLX4YLR135W VHR1P40522 640 aa1.72□□□□□ -2.13
SLX4YLR135W ENP2P48234 707 aaKnown RBP1.72□□□□□ -2.13
SLX4YLR135W PUS4P48567 403 aaKnown RBP1.72□□□□□ -2.13
SLX4YLR135W GCV2P49095 1034 aa1.72□□□□□ -2.13
SLX4YLR135W EXG2P52911 562 aa1.72□□□□□ -2.13
SLX4YLR135W PIP2P52960 996 aa1.72□□□□□ -2.13
SLX4YLR135W SCS3P53012 380 aa1.72□□□□□ -2.13
SLX4YLR135W SPC105P53148 917 aa1.72□□□□□ -2.13
SLX4YLR135W PAP2P53632 584 aaKnown RBP1.72□□□□□ -2.13
SLX4YLR135W CNM67P53865 581 aaKnown RBP1.72□□□□□ -2.13
SLX4YLR135W NOP15P53927 220 aaPredicted RBP1.72□□□□□ -2.13
SLX4YLR135W UBX4P54730 416 aa1.72□□□□□ -2.13
SLX4YLR135W ARG5,6Q01217 863 aa1.72□□□□□ -2.13
SLX4YLR135W MET14Q02196 202 aa1.72□□□□□ -2.13
SLX4YLR135W PKH1Q03407 766 aa1.72□□□□□ -2.13
SLX4YLR135W MLC2Q06580 163 aa1.72□□□□□ -2.13
SLX4YLR135W ENB1Q08299 606 aa1.72□□□□□ -2.13
SLX4YLR135W RRP6Q12149 733 aaKnown RBP1.72□□□□□ -2.13
SLX4YLR135W CDC26P14724 124 aa1.72□□□□□ -2.13
SLX4YLR135W NOP1P15646 327 aaKnown RBP1.72□□□□□ -2.13
SLX4YLR135W DPB3P27344 201 aa1.72□□□□□ -2.13
SLX4YLR135W MF(ALPHA)2P32435 120 aa1.72□□□□□ -2.13
SLX4YLR135W YPT7P32939 208 aa1.72□□□□□ -2.13
SLX4YLR135W CTF13P35203 478 aa1.72□□□□□ -2.13
SLX4YLR135W APT2P36973 181 aa1.72□□□□□ -2.13
SLX4YLR135W KTR4P38131 464 aa1.72□□□□□ -2.13
SLX4YLR135W APN2P38207 520 aa1.72□□□□□ -2.13
SLX4YLR135W FAT1P38225 669 aa1.72□□□□□ -2.13
SLX4YLR135W SRP68P38687 599 aaKnown RBP1.72□□□□□ -2.13
SLX4YLR135W IES5P40060 125 aa1.72□□□□□ -2.13
SLX4YLR135W BFA1P47113 574 aa1.72□□□□□ -2.13
SLX4YLR135W PRP31P49704 494 aaPredicted RBP1.72□□□□□ -2.13
SLX4YLR135W YBP2P53169 641 aa1.72□□□□□ -2.13
SLX4YLR135W REC102Q02721 264 aa1.72□□□□□ -2.13
SLX4YLR135W NSE5Q03718 556 aa1.72□□□□□ -2.13
SLX4YLR135W VMS1Q04311 632 aaKnown RBP1.72□□□□□ -2.13
SLX4YLR135W ASM4Q05166 528 aa1.72□□□□□ -2.13
SLX4YLR135W YLR224WQ05947 369 aa1.72□□□□□ -2.13
SLX4YLR135W YLR407WQ06070 228 aa1.72□□□□□ -2.13
SLX4YLR135W ATG11Q12527 1178 aa1.72□□□□□ -2.13
SLX4YLR135W RPS17AP02407 136 aaKnown RBP1.71□□□□□ -2.14
SLX4YLR135W PIF1P07271 859 aa1.71□□□□□ -2.14
SLX4YLR135W RPS17BP14127 136 aaKnown RBP1.71□□□□□ -2.14
SLX4YLR135W IME1P21190 360 aa1.71□□□□□ -2.14
SLX4YLR135W ADE2P21264 571 aaKnown RBP1.71□□□□□ -2.14
SLX4YLR135W IMG2P25642 146 aaPredicted RBP1.71□□□□□ -2.14
SLX4YLR135W PTP2P29461 750 aa1.71□□□□□ -2.14
SLX4YLR135W PET127P32606 800 aa1.71□□□□□ -2.14
SLX4YLR135W YKU70P32807 602 aa1.71□□□□□ -2.14
SLX4YLR135W YKL133CP36066 463 aa1.71□□□□□ -2.14
SLX4YLR135W YHR202WP38887 602 aa1.71□□□□□ -2.14
SLX4YLR135W PMC1P38929 1173 aaPredicted RBP1.71□□□□□ -2.14
SLX4YLR135W MSS4P38994 779 aa1.71□□□□□ -2.14
SLX4YLR135W MNN10P50108 393 aaKnown RBP1.71□□□□□ -2.14
SLX4YLR135W ERG5P54781 538 aa1.71□□□□□ -2.14
SLX4YLR135W LEE1Q02799 301 aaKnown RBP1.71□□□□□ -2.14
SLX4YLR135W PEX19Q07418 342 aa1.71□□□□□ -2.14
SLX4YLR135W MPD2Q99316 277 aa1.71□□□□□ -2.14
SLX4YLR135W GAL1P04385 528 aa1.71□□□□□ -2.14
SLX4YLR135W PYC1P11154 1178 aaKnown RBP1.71□□□□□ -2.14
SLX4YLR135W GLN4P13188 809 aaKnown RBP1.71□□□□□ -2.14
SLX4YLR135W YEF3P16521 1044 aaKnown RBP1.71□□□□□ -2.14
SLX4YLR135W HOP1P20050 605 aa1.71□□□□□ -2.14
SLX4YLR135W KCC4P25389 1037 aa1.71□□□□□ -2.14
SLX4YLR135W KAR4P25583 335 aa1.71□□□□□ -2.14
SLX4YLR135W LST4P34239 828 aa1.71□□□□□ -2.14
SLX4YLR135W FUI1P38196 639 aa1.71□□□□□ -2.14
SLX4YLR135W RPP1P38786 293 aa1.71□□□□□ -2.14
SLX4YLR135W PLB1P39105 664 aa1.71□□□□□ -2.14
SLX4YLR135W VID28P40547 921 aa1.71□□□□□ -2.14
SLX4YLR135W BAP3P41815 604 aa1.71□□□□□ -2.14
SLX4YLR135W IRC5P43610 853 aa1.71□□□□□ -2.14
SLX4YLR135W DAS1P47005 663 aa1.71□□□□□ -2.14
SLX4YLR135W HOL1P53389 586 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 141.8 ms