RNA–Protein interactions for RNA: YJL004C

SYS1, Transcript of Integral membrane protein of the Golgi, yeast

Gene SYS1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SYS1	YJL004C	YOR131C	Q12486	218 aa		4.31	□□□□□ -1.72
SYS1	YJL004C	ABF1	P14164	731 aa		4.3	□□□□□ -1.72
SYS1	YJL004C	GSY1	P23337	708 aa		4.3	□□□□□ -1.72
SYS1	YJL004C	PEX1	P24004	1043 aa		4.3	□□□□□ -1.72
SYS1	YJL004C	ERG6	P25087	383 aa	Known RBP	4.3	□□□□□ -1.72
SYS1	YJL004C	FUB1	P25659	250 aa		4.3	□□□□□ -1.72
SYS1	YJL004C	CAF16	P43569	289 aa		4.3	□□□□□ -1.72
SYS1	YJL004C	DIA2	Q08496	732 aa	Predicted RBP	4.3	□□□□□ -1.72
SYS1	YJL004C	KCC4	P25389	1037 aa		4.29	□□□□□ -1.72
SYS1	YJL004C	HSL7	P38274	827 aa		4.29	□□□□□ -1.72
SYS1	YJL004C	GET2	P40056	285 aa		4.29	□□□□□ -1.72
SYS1	YJL004C	GID8	P40208	455 aa		4.29	□□□□□ -1.72
SYS1	YJL004C	NNF1	P47149	201 aa		4.29	□□□□□ -1.72
SYS1	YJL004C	SEG1	Q04279	960 aa		4.29	□□□□□ -1.72
SYS1	YJL004C	RPN7	Q06103	429 aa	Known RBP	4.29	□□□□□ -1.72
SYS1	YJL004C	Q0142	Q9ZZW4	58 aa		4.29	□□□□□ -1.72
SYS1	YJL004C	YKR018C	P36114	725 aa		4.28	□□□□□ -1.72
SYS1	YJL004C	PIG2	P40187	538 aa		4.28	□□□□□ -1.72
SYS1	YJL004C	PCL10	P53124	433 aa		4.28	□□□□□ -1.72
SYS1	YJL004C	RIM13	Q03792	727 aa		4.28	□□□□□ -1.72
SYS1	YJL004C	MDM12	Q92328	271 aa		4.28	□□□□□ -1.72
SYS1	YJL004C	CIT2	P08679	460 aa		4.27	□□□□□ -1.73
SYS1	YJL004C	PRP28	P23394	588 aa		4.27	□□□□□ -1.73
SYS1	YJL004C	YKR051W	P36142	418 aa		4.27	□□□□□ -1.73
SYS1	YJL004C	MAL11	P53048	616 aa		4.27	□□□□□ -1.73
SYS1	YJL004C	COX18	P53239	316 aa		4.27	□□□□□ -1.73
SYS1	YJL004C	NHX1	Q04121	633 aa		4.27	□□□□□ -1.73
SYS1	YJL004C	CDC9	P04819	755 aa		4.26	□□□□□ -1.73
SYS1	YJL004C	SET3	P36124	751 aa		4.26	□□□□□ -1.73
SYS1	YJL004C	BIT2	P38346	545 aa		4.26	□□□□□ -1.73
SYS1	YJL004C	NOP9	P47077	666 aa	Known RBP	4.26	□□□□□ -1.73
SYS1	YJL004C	RGC1	Q06108	1083 aa	Known RBP	4.26	□□□□□ -1.73
SYS1	YJL004C	OSW1	Q08692	278 aa		4.26	□□□□□ -1.73
SYS1	YJL004C	BMS1	Q08965	1183 aa	Known RBP	4.26	□□□□□ -1.73
SYS1	YJL004C	ERR1	P0CX10	437 aa		4.25	□□□□□ -1.73
SYS1	YJL004C	ERR2	P0CX11	437 aa		4.25	□□□□□ -1.73
SYS1	YJL004C	RPA135	P22138	1203 aa	Known RBP	4.25	□□□□□ -1.73
SYS1	YJL004C	HOG1	P32485	435 aa		4.25	□□□□□ -1.73
SYS1	YJL004C	YGR151C	P53287	111 aa		4.25	□□□□□ -1.73
SYS1	YJL004C	THI22	Q06490	572 aa		4.25	□□□□□ -1.73
SYS1	YJL004C	APN2	P38207	520 aa		4.24	□□□□□ -1.73
SYS1	YJL004C	LTP1	P40347	161 aa		4.24	□□□□□ -1.73
SYS1	YJL004C	RSC8	P43609	557 aa	Known RBP	4.24	□□□□□ -1.73
SYS1	YJL004C	SPC98	P53540	846 aa		4.24	□□□□□ -1.73
SYS1	YJL004C	YOL098C	Q12496	1037 aa		4.24	□□□□□ -1.73
SYS1	YJL004C	ECM3	Q99252	613 aa		4.24	□□□□□ -1.73
SYS1	YJL004C	BCS1	P32839	456 aa		4.23	□□□□□ -1.73
SYS1	YJL004C	DSS1	P39112	969 aa		4.23	□□□□□ -1.73
SYS1	YJL004C	SET2	P46995	733 aa	Known RBP	4.23	□□□□□ -1.73
SYS1	YJL004C	YDL086W	Q07505	273 aa		4.23	□□□□□ -1.73
SYS1	YJL004C	CHS5	Q12114	671 aa	Known RBP	4.23	□□□□□ -1.73
SYS1	YJL004C	MIH1	P23748	554 aa		4.22	□□□□□ -1.73
SYS1	YJL004C	PTP1	P25044	335 aa		4.22	□□□□□ -1.73
SYS1	YJL004C	SAT4	P25333	603 aa	Known RBP	4.22	□□□□□ -1.73
SYS1	YJL004C	VBA3	P25594	458 aa		4.22	□□□□□ -1.73
SYS1	YJL004C	SRP40	P32583	406 aa	Predicted RBP	4.22	□□□□□ -1.73
SYS1	YJL004C	DOT6	P40059	670 aa	Known RBP	4.22	□□□□□ -1.73
SYS1	YJL004C	COG8	Q04632	607 aa		4.22	□□□□□ -1.73
SYS1	YJL004C	ADE5,7	P07244	802 aa	Known RBP	4.21	□□□□□ -1.74
SYS1	YJL004C	SRD1	P09007	221 aa		4.21	□□□□□ -1.74
SYS1	YJL004C	ERG11	P10614	530 aa		4.21	□□□□□ -1.74
SYS1	YJL004C	STE12	P13574	688 aa		4.21	□□□□□ -1.74
SYS1	YJL004C	NTH1	P32356	751 aa		4.21	□□□□□ -1.74
SYS1	YJL004C	UGP1	P32861	499 aa	Known RBP	4.21	□□□□□ -1.74
SYS1	YJL004C	APL3	P38065	1025 aa		4.21	□□□□□ -1.74
SYS1	YJL004C	YMC2	P38087	329 aa		4.21	□□□□□ -1.74
SYS1	YJL004C	KSP1	P38691	1029 aa	Known RBP	4.21	□□□□□ -1.74
SYS1	YJL004C	BNA3	P47039	444 aa	Known RBP	4.21	□□□□□ -1.74
SYS1	YJL004C	ARP4	P80428	489 aa		4.21	□□□□□ -1.74
SYS1	YJL004C	FMP30	Q02883	468 aa		4.21	□□□□□ -1.74
SYS1	YJL004C	RPN4	Q03465	531 aa		4.21	□□□□□ -1.74
SYS1	YJL004C	YSH1	Q06224	779 aa	Predicted RBP	4.21	□□□□□ -1.74
SYS1	YJL004C	PGK1	P00560	416 aa	Known RBP	4.2	□□□□□ -1.74
SYS1	YJL004C	RAD18	P10862	487 aa		4.2	□□□□□ -1.74
SYS1	YJL004C	SEC6	P32844	805 aa		4.2	□□□□□ -1.74
SYS1	YJL004C	TIM23	P32897	222 aa		4.2	□□□□□ -1.74
SYS1	YJL004C	CTP1	P38152	299 aa		4.2	□□□□□ -1.74
SYS1	YJL004C	MPS3	P47069	682 aa		4.2	□□□□□ -1.74
SYS1	YJL004C	YLR125W	Q12138	136 aa		4.2	□□□□□ -1.74
SYS1	YJL004C	ERG20	P08524	352 aa	Known RBP	4.19	□□□□□ -1.74
SYS1	YJL004C	MEF1	P25039	761 aa		4.19	□□□□□ -1.74
SYS1	YJL004C	FEN2	P25621	512 aa	Known RBP	4.19	□□□□□ -1.74
SYS1	YJL004C	YEL1	P34225	687 aa		4.19	□□□□□ -1.74
SYS1	YJL004C	PMC1	P38929	1173 aa	Predicted RBP	4.19	□□□□□ -1.74
SYS1	YJL004C	NET1	P47035	1189 aa		4.19	□□□□□ -1.74
SYS1	YJL004C	PHO5	P00635	467 aa		4.18	□□□□□ -1.74
SYS1	YJL004C	SEC15	P22224	910 aa		4.18	□□□□□ -1.74
SYS1	YJL004C	YKL091C	P33324	310 aa	Known RBP	4.18	□□□□□ -1.74
SYS1	YJL004C	MIT1	P40002	666 aa		4.18	□□□□□ -1.74
SYS1	YJL004C	YNL195C	P40168	261 aa		4.18	□□□□□ -1.74
SYS1	YJL004C	GAT1	P43574	510 aa		4.18	□□□□□ -1.74
SYS1	YJL004C	GPD1	Q00055	391 aa	Known RBP	4.18	□□□□□ -1.74
SYS1	YJL004C	UGO1	Q03327	502 aa		4.18	□□□□□ -1.74
SYS1	YJL004C	MDM20	Q12387	796 aa	Known RBP	4.18	□□□□□ -1.74
SYS1	YJL004C	POM34	Q12445	299 aa		4.18	□□□□□ -1.74
SYS1	YJL004C	LAM4	P38800	1345 aa		4.18	□□□□□ -1.74
SYS1	YJL004C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SYS1	YJL004C	SSZ1	P38788	538 aa	Known RBP	4.17	□□□□□ -1.74
SYS1	YJL004C	YHR097C	P38809	366 aa	Known RBP	4.17	□□□□□ -1.74
SYS1	YJL004C	KHA1	P40309	873 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms