RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W EAF5P39995 279 aa5.59□□□□□ -1.51
DEG1YFL001W MTR3P48240 250 aaPredicted RBP5.59□□□□□ -1.51
DEG1YFL001W FOL2P51601 243 aaKnown RBP5.59□□□□□ -1.51
DEG1YFL001W TEP1P53916 434 aa5.59□□□□□ -1.51
DEG1YFL001W ORC4P54791 529 aa5.59□□□□□ -1.51
DEG1YFL001W YMR210WQ03649 449 aa5.59□□□□□ -1.51
DEG1YFL001W ASM4Q05166 528 aa5.59□□□□□ -1.51
DEG1YFL001W NUR1Q12066 484 aa5.59□□□□□ -1.51
DEG1YFL001W ARP7Q12406 477 aa5.59□□□□□ -1.51
DEG1YFL001W IMG2P25642 146 aaPredicted RBP5.58□□□□□ -1.52
DEG1YFL001W APN2P38207 520 aa5.58□□□□□ -1.52
DEG1YFL001W STL1P39932 569 aa5.58□□□□□ -1.52
DEG1YFL001W GID8P40208 455 aa5.58□□□□□ -1.52
DEG1YFL001W URM1P40554 99 aaPredicted RBP5.58□□□□□ -1.52
DEG1YFL001W TAF1P46677 1066 aa5.58□□□□□ -1.52
DEG1YFL001W ENP2P48234 707 aaKnown RBP5.58□□□□□ -1.52
DEG1YFL001W ORC3P54790 616 aa5.58□□□□□ -1.52
DEG1YFL001W MTD1Q02046 320 aaKnown RBP5.58□□□□□ -1.52
DEG1YFL001W TRS130Q03660 1102 aa5.58□□□□□ -1.52
DEG1YFL001W CIA1Q05583 330 aa5.58□□□□□ -1.52
DEG1YFL001W ADY3Q07732 790 aa5.58□□□□□ -1.52
DEG1YFL001W CYC1P00044 109 aaPredicted RBP5.57□□□□□ -1.52
DEG1YFL001W GAL10P04397 699 aa5.57□□□□□ -1.52
DEG1YFL001W ACO1P19414 778 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
DEG1YFL001W MSH1P25846 959 aa5.57□□□□□ -1.52
DEG1YFL001W MF(ALPHA)2P32435 120 aa5.57□□□□□ -1.52
DEG1YFL001W STE14P32584 239 aa5.57□□□□□ -1.52
DEG1YFL001W SDS22P36047 338 aa5.57□□□□□ -1.52
DEG1YFL001W SAK1P38990 1142 aa5.57□□□□□ -1.52
DEG1YFL001W PZF1P39933 429 aa5.57□□□□□ -1.52
DEG1YFL001W VPS27P40343 622 aaKnown RBP5.57□□□□□ -1.52
DEG1YFL001W ERR3P42222 437 aa5.57□□□□□ -1.52
DEG1YFL001W MOT3P54785 490 aaKnown RBP5.57□□□□□ -1.52
DEG1YFL001W HIM1Q06674 414 aa5.57□□□□□ -1.52
DEG1YFL001W WHI4Q07655 649 aaKnown RBP5.57□□□□□ -1.52
DEG1YFL001W TPO1Q07824 586 aa5.57□□□□□ -1.52
DEG1YFL001W SSP2Q08646 371 aa5.57□□□□□ -1.52
DEG1YFL001W PSF3Q12146 194 aa5.57□□□□□ -1.52
DEG1YFL001W UPC2Q12151 913 aa5.57□□□□□ -1.52
DEG1YFL001W RRI2Q12348 645 aa5.57□□□□□ -1.52
DEG1YFL001W SEC18P18759 758 aaKnown RBP5.56□□□□□ -1.52
DEG1YFL001W DGR2P32330 852 aa5.56□□□□□ -1.52
DEG1YFL001W PFA3P42836 336 aa5.56□□□□□ -1.52
DEG1YFL001W ASI2P53895 289 aa5.56□□□□□ -1.52
DEG1YFL001W MUS81Q04149 632 aaPredicted RBP5.56□□□□□ -1.52
DEG1YFL001W YPS7Q06325 596 aa5.56□□□□□ -1.52
DEG1YFL001W KCS1Q12494 1050 aa5.56□□□□□ -1.52
DEG1YFL001W CYC7P00045 113 aa5.55□□□□□ -1.52
DEG1YFL001W RPP2AP05319 106 aaKnown RBP5.55□□□□□ -1.52
DEG1YFL001W YEL076C-AP0CX16 216 aa5.55□□□□□ -1.52
DEG1YFL001W YLR464WP0CX17 216 aa5.55□□□□□ -1.52
DEG1YFL001W BEM3P32873 1128 aa5.55□□□□□ -1.52
DEG1YFL001W TGL1P34163 548 aa5.55□□□□□ -1.52
DEG1YFL001W DUN1P39009 513 aa5.55□□□□□ -1.52
DEG1YFL001W NOC2P39744 710 aaKnown RBP5.55□□□□□ -1.52
DEG1YFL001W YEL076CP39971 216 aa5.55□□□□□ -1.52
DEG1YFL001W IML2P47031 731 aa5.55□□□□□ -1.52
DEG1YFL001W YRB30P53107 440 aaPredicted RBP5.55□□□□□ -1.52
DEG1YFL001W GTR1Q00582 310 aa5.55□□□□□ -1.52
DEG1YFL001W BLS1Q06071 122 aa5.55□□□□□ -1.52
DEG1YFL001W OPY2Q06810 360 aa5.55□□□□□ -1.52
DEG1YFL001W STP4Q07351 490 aa5.55□□□□□ -1.52
DEG1YFL001W SED4P25365 1065 aa5.54□□□□□ -1.52
DEG1YFL001W SHM2P37291 469 aaKnown RBP5.54□□□□□ -1.52
DEG1YFL001W SSP120P39931 234 aaKnown RBP5.54□□□□□ -1.52
DEG1YFL001W SCS2P40075 244 aaKnown RBP5.54□□□□□ -1.52
DEG1YFL001W MET12P46151 657 aa5.54□□□□□ -1.52
DEG1YFL001W UBA2P52488 636 aa5.54□□□□□ -1.52
DEG1YFL001W EXG2P52911 562 aa5.54□□□□□ -1.52
DEG1YFL001W ADH4P10127 382 aa5.53□□□□□ -1.52
DEG1YFL001W PYC1P11154 1178 aaKnown RBP5.53□□□□□ -1.52
DEG1YFL001W HSC82P15108 705 aaKnown RBP5.53□□□□□ -1.52
DEG1YFL001W IME1P21190 360 aa5.53□□□□□ -1.52
DEG1YFL001W GFD2P25370 566 aaKnown RBP5.53□□□□□ -1.52
DEG1YFL001W MCM10P32354 571 aa5.53□□□□□ -1.52
DEG1YFL001W NGG1P32494 702 aa5.53□□□□□ -1.52
DEG1YFL001W PET127P32606 800 aa5.53□□□□□ -1.52
DEG1YFL001W YBP2P53169 641 aa5.53□□□□□ -1.52
DEG1YFL001W ARG5,6Q01217 863 aa5.53□□□□□ -1.52
DEG1YFL001W ISA1Q07821 250 aaPredicted RBP5.53□□□□□ -1.52
DEG1YFL001W NEW1Q08972 1196 aaKnown RBP5.53□□□□□ -1.52
DEG1YFL001W DNA2P38859 1522 aa5.53□□□□□ -1.52
DEG1YFL001W GFA1P14742 717 aaKnown RBP5.52□□□□□ -1.53
DEG1YFL001W PRP4P20053 465 aaKnown RBP5.52□□□□□ -1.53
DEG1YFL001W APM3P38153 483 aa5.52□□□□□ -1.53
DEG1YFL001W PSY4P38193 441 aa5.52□□□□□ -1.53
DEG1YFL001W SIC1P38634 284 aa5.52□□□□□ -1.53
DEG1YFL001W SWD1P39706 426 aa5.52□□□□□ -1.53
DEG1YFL001W SPC72P39723 622 aa5.52□□□□□ -1.53
DEG1YFL001W VHR1P40522 640 aa5.52□□□□□ -1.53
DEG1YFL001W MAD3P47074 515 aa5.52□□□□□ -1.53
DEG1YFL001W PRP31P49704 494 aaPredicted RBP5.52□□□□□ -1.53
DEG1YFL001W PLB2Q03674 706 aa5.52□□□□□ -1.53
DEG1YFL001W NSE5Q03718 556 aa5.52□□□□□ -1.53
DEG1YFL001W EIS1Q05050 843 aaKnown RBP5.52□□□□□ -1.53
DEG1YFL001W ENT2Q05785 613 aa5.52□□□□□ -1.53
DEG1YFL001W VHS3Q08438 674 aa5.52□□□□□ -1.53
DEG1YFL001W YOL087CQ99247 1116 aa5.52□□□□□ -1.53
DEG1YFL001W SPT6P23615 1451 aaKnown RBP5.52□□□□□ -1.53
DEG1YFL001W HSL1P34244 1518 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms