RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A YDR179W-AQ03983 463 aa1.23□□□□□ -2.21
TFB5YDR079C-A HRP1Q99383 534 aaKnown RBP1.23□□□□□ -2.21
TFB5YDR079C-A MRPL9P31334 269 aa1.22□□□□□ -2.21
TFB5YDR079C-A YHR112CP38716 378 aa1.22□□□□□ -2.21
TFB5YDR079C-A CRP1P38845 465 aaKnown RBP1.22□□□□□ -2.21
TFB5YDR079C-A TOK1P40310 691 aa1.22□□□□□ -2.21
TFB5YDR079C-A MTR3P48240 250 aaPredicted RBP1.22□□□□□ -2.21
TFB5YDR079C-A YGL117WP53133 265 aa1.22□□□□□ -2.21
TFB5YDR079C-A FCP1Q03254 732 aa1.22□□□□□ -2.21
TFB5YDR079C-A YMR317WQ04893 1140 aa1.22□□□□□ -2.21
TFB5YDR079C-A ENT2Q05785 613 aa1.22□□□□□ -2.21
TFB5YDR079C-A PRC1P00729 532 aa1.21□□□□□ -2.22
TFB5YDR079C-A TOP3P13099 656 aa1.21□□□□□ -2.22
TFB5YDR079C-A AAR2P32357 355 aaPredicted RBP1.21□□□□□ -2.22
TFB5YDR079C-A TIF3P34167 436 aaKnown RBP1.21□□□□□ -2.22
TFB5YDR079C-A YHR097CP38809 366 aaKnown RBP1.21□□□□□ -2.22
TFB5YDR079C-A THI21Q08975 551 aa1.21□□□□□ -2.22
TFB5YDR079C-A YEL076C-AP0CX16 216 aa1.2□□□□□ -2.22
TFB5YDR079C-A YLR464WP0CX17 216 aa1.2□□□□□ -2.22
TFB5YDR079C-A SSA1P10591 642 aaKnown RBP1.2□□□□□ -2.22
TFB5YDR079C-A ERG6P25087 383 aaKnown RBP1.2□□□□□ -2.22
TFB5YDR079C-A TRZ1P36159 838 aaPredicted RBP1.2□□□□□ -2.22
TFB5YDR079C-A DHH1P39517 506 aaKnown RBP1.2□□□□□ -2.22
TFB5YDR079C-A YEL076CP39971 216 aa1.2□□□□□ -2.22
TFB5YDR079C-A PRP31P49704 494 aaPredicted RBP1.2□□□□□ -2.22
TFB5YDR079C-A CPR8P53728 308 aa1.2□□□□□ -2.22
TFB5YDR079C-A NOG2P53742 486 aaKnown RBP1.2□□□□□ -2.22
TFB5YDR079C-A YDL086WQ07505 273 aa1.2□□□□□ -2.22
TFB5YDR079C-A ADE2P21264 571 aaKnown RBP1.19□□□□□ -2.22
TFB5YDR079C-A URE2P23202 354 aaKnown RBP1.19□□□□□ -2.22
TFB5YDR079C-A SBA1P28707 216 aaKnown RBP1.19□□□□□ -2.22
TFB5YDR079C-A REC104P33323 182 aa1.19□□□□□ -2.22
TFB5YDR079C-A PET112P33893 541 aa1.19□□□□□ -2.22
TFB5YDR079C-A APL2P36000 726 aaPredicted RBP1.19□□□□□ -2.22
TFB5YDR079C-A GET2P40056 285 aa1.19□□□□□ -2.22
TFB5YDR079C-A FYV10P40492 516 aa1.19□□□□□ -2.22
TFB5YDR079C-A BST1P43571 1029 aa1.19□□□□□ -2.22
TFB5YDR079C-A REV1P12689 985 aa1.18□□□□□ -2.22
TFB5YDR079C-A PMA2P19657 947 aa1.18□□□□□ -2.22
TFB5YDR079C-A APD1P38281 316 aa1.18□□□□□ -2.22
TFB5YDR079C-A YIL024CP40543 189 aa1.18□□□□□ -2.22
TFB5YDR079C-A LCD1Q04377 747 aa1.18□□□□□ -2.22
TFB5YDR079C-A RSA1Q08932 381 aa1.18□□□□□ -2.22
TFB5YDR079C-A RKI1Q12189 258 aa1.18□□□□□ -2.22
TFB5YDR079C-A PRP16P15938 1071 aaPredicted RBP1.17□□□□□ -2.22
TFB5YDR079C-A SAN1P22470 610 aa1.17□□□□□ -2.22
TFB5YDR079C-A YCR043CP25361 127 aa1.17□□□□□ -2.22
TFB5YDR079C-A YBP2P53169 641 aa1.17□□□□□ -2.22
TFB5YDR079C-A ADD37Q03233 198 aa1.17□□□□□ -2.22
TFB5YDR079C-A NGL2Q03264 515 aaKnown RBP1.17□□□□□ -2.22
TFB5YDR079C-A YMR085WP0CF18 432 aa1.16□□□□□ -2.22
TFB5YDR079C-A RAD18P10862 487 aa1.16□□□□□ -2.22
TFB5YDR079C-A AGP1P25376 633 aa1.16□□□□□ -2.22
TFB5YDR079C-A APL3P38065 1025 aa1.16□□□□□ -2.22
TFB5YDR079C-A SSF1P38789 453 aaPredicted RBP1.16□□□□□ -2.22
TFB5YDR079C-A YIL152WP40455 235 aa1.16□□□□□ -2.22
TFB5YDR079C-A RPL15BP54780 204 aaPredicted RBP1.16□□□□□ -2.22
TFB5YDR079C-A ARG5,6Q01217 863 aa1.16□□□□□ -2.22
TFB5YDR079C-A MCM21Q06675 368 aa1.16□□□□□ -2.22
TFB5YDR079C-A ENV7Q12003 364 aa1.16□□□□□ -2.22
TFB5YDR079C-A HEM1P09950 548 aaPredicted RBP1.15□□□□□ -2.23
TFB5YDR079C-A AQY1P0CD91 305 aa1.15□□□□□ -2.23
TFB5YDR079C-A DAL7P21826 554 aa1.15□□□□□ -2.23
TFB5YDR079C-A PRP28P23394 588 aa1.15□□□□□ -2.23
TFB5YDR079C-A YCL002CP25565 263 aa1.15□□□□□ -2.23
TFB5YDR079C-A TES1P41903 349 aaKnown RBP1.15□□□□□ -2.23
TFB5YDR079C-A ATG36P46983 293 aa1.15□□□□□ -2.23
TFB5YDR079C-A HOS2P53096 452 aaPredicted RBP1.15□□□□□ -2.23
TFB5YDR079C-A LRS4Q04087 347 aaKnown RBP1.15□□□□□ -2.23
TFB5YDR079C-A PEX1P24004 1043 aa1.14□□□□□ -2.23
TFB5YDR079C-A SEC20P28791 383 aa1.14□□□□□ -2.23
TFB5YDR079C-A APT2P36973 181 aa1.14□□□□□ -2.23
TFB5YDR079C-A CTP1P38152 299 aa1.14□□□□□ -2.23
TFB5YDR079C-A BIT2P38346 545 aa1.14□□□□□ -2.23
TFB5YDR079C-A CFD1P40558 293 aa1.14□□□□□ -2.23
TFB5YDR079C-A OPT1P40897 799 aa1.14□□□□□ -2.23
TFB5YDR079C-A KRI1P42846 591 aaKnown RBP1.14□□□□□ -2.23
TFB5YDR079C-A MDV1P47025 714 aa1.14□□□□□ -2.23
TFB5YDR079C-A SHE10P53075 577 aa1.14□□□□□ -2.23
TFB5YDR079C-A TPO2P53283 614 aa1.14□□□□□ -2.23
TFB5YDR079C-A SNF12P53628 566 aa1.14□□□□□ -2.23
TFB5YDR079C-A YSH1Q06224 779 aaPredicted RBP1.14□□□□□ -2.23
TFB5YDR079C-A BSP1Q06604 576 aa1.14□□□□□ -2.23
TFB5YDR079C-A YLR111WQ12528 110 aa1.14□□□□□ -2.23
TFB5YDR079C-A RQC2Q12532 1038 aaKnown RBP1.14□□□□□ -2.23
TFB5YDR079C-A CSR2Q12734 1121 aa1.14□□□□□ -2.23
TFB5YDR079C-A RPL7AP05737 244 aaKnown RBP1.13□□□□□ -2.23
TFB5YDR079C-A AIM17P23180 465 aaKnown RBP1.13□□□□□ -2.23
TFB5YDR079C-A BCS1P32839 456 aa1.13□□□□□ -2.23
TFB5YDR079C-A RPC34P32910 317 aa1.13□□□□□ -2.23
TFB5YDR079C-A MTG2P38860 518 aa1.13□□□□□ -2.23
TFB5YDR079C-A SET5P38890 526 aaKnown RBP1.13□□□□□ -2.23
TFB5YDR079C-A TAD1P53065 400 aa1.13□□□□□ -2.23
TFB5YDR079C-A BOP3P53958 396 aa1.13□□□□□ -2.23
TFB5YDR079C-A HMO1Q03973 246 aaKnown RBP1.13□□□□□ -2.23
TFB5YDR079C-A CHS5Q12114 671 aaKnown RBP1.13□□□□□ -2.23
TFB5YDR079C-A RPL7BQ12213 244 aaKnown RBP1.13□□□□□ -2.23
TFB5YDR079C-A RPS9BP05755 195 aaKnown RBP1.12□□□□□ -2.23
TFB5YDR079C-A VBA5P36172 582 aa1.12□□□□□ -2.23
TFB5YDR079C-A MRPL4P36517 319 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms