RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT2	YDL007W	FAR8	Q05040	523 aa		5.78	□□□□□ -1.48
RPT2	YDL007W	MRL1	Q06815	381 aa		5.78	□□□□□ -1.48
RPT2	YDL007W	SAC3	P46674	1301 aa		5.78	□□□□□ -1.48
RPT2	YDL007W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	RIP-Chip
RPT2	YDL007W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
RPT2	YDL007W	CKI1	P20485	582 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	MSB1	P21339	1137 aa	Known RBP	5.77	□□□□□ -1.49
RPT2	YDL007W	TFC3	P34111	1160 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	NNK1	P36003	928 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	LAS1	P36146	502 aa	Predicted RBP	5.77	□□□□□ -1.49
RPT2	YDL007W	PIH1	P38768	344 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	REV7	P38927	245 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	AKR1	P39010	764 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	YJL049W	P47048	450 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	YJR008W	P47085	338 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	TMA22	P47089	198 aa	Predicted RBP	5.77	□□□□□ -1.49
RPT2	YDL007W	YGR237C	P50089	785 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	YGR053C	P53234	283 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	ADE16	P54113	591 aa	Known RBP	5.77	□□□□□ -1.49
RPT2	YDL007W	RKM2	Q03942	479 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	POB3	Q04636	552 aa	Known RBP	5.77	□□□□□ -1.49
RPT2	YDL007W	RSA3	Q05942	220 aa	Known RBP	5.77	□□□□□ -1.49
RPT2	YDL007W	TDA5	Q06417	326 aa	Known RBP	5.77	□□□□□ -1.49
RPT2	YDL007W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
RPT2	YDL007W	OPI10	Q08202	246 aa		5.77	□□□□□ -1.49
RPT2	YDL007W	TOM70	P07213	617 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	PYC1	P11154	1178 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	PRP4	P20053	465 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	HCA4	P20448	770 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	BAS1	P22035	811 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	CDC11	P32458	415 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	SEC66	P33754	206 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	ECM4	P36156	370 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	MIP6	P38760	659 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	RPN10	P38886	268 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	YMR124W	P39523	943 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	MMM1	P41800	426 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	YFL040W	P43562	540 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	ENP2	P48234	707 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	HFM1	P51979	1187 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	PCL10	P53124	433 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	GTR1	Q00582	310 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	UME1	Q03010	460 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	UTP5	Q04177	643 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	TAF9	Q05027	157 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	YLR287C	Q05881	355 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	ALE1	Q08548	619 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	CIR2	Q08822	631 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	RTT10	Q08924	1013 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	NEW1	Q08972	1196 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	GNT1	Q12096	491 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	FAL1	Q12099	399 aa	Known RBP	5.76	□□□□□ -1.49
RPT2	YDL007W	YOR131C	Q12486	218 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	NKP1	Q12493	238 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	LAM4	P38800	1345 aa		5.76	□□□□□ -1.49
RPT2	YDL007W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.75	□□□□□ -1.49
RPT2	YDL007W	TY1A-DR6	P0CX70	440 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	TY1A-ER1	P0CX71	440 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	TY1A-LR2	P0CX72	440 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	TY1A-PL	P0CX73	440 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	TY1A-JR1	P0CX74	440 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	TY1A-LR3	P0CX75	440 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	TY1A-ML2	P0CX76	440 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
RPT2	YDL007W	CBP3	P21560	335 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	OPI1	P21957	404 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	YKL069W	P36088	180 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	GPT2	P36148	743 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
RPT2	YDL007W	SPP381	P38282	291 aa	Predicted RBP	5.75	□□□□□ -1.49
RPT2	YDL007W	OSH3	P38713	996 aa	Known RBP	5.75	□□□□□ -1.49
RPT2	YDL007W	SIP3	P38717	1229 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	TDA3	P38758	523 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	TOM71	P38825	639 aa	Known RBP	5.75	□□□□□ -1.49
RPT2	YDL007W	TAT2	P38967	592 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	VFA1	P40080	203 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	AXL1	P40851	1208 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	CIT3	P43635	486 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	EBS1	Q03466	884 aa	Known RBP	5.75	□□□□□ -1.49
RPT2	YDL007W	URH1	Q04179	340 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	VTI1	Q04338	217 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	SPC24	Q04477	213 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	SOV1	Q04748	898 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	PIG1	Q06216	648 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	BDF2	Q07442	638 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	OSW1	Q08692	278 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	TY1A-GR1	Q12085	440 aa		5.75	□□□□□ -1.49
RPT2	YDL007W	RIB2	Q12362	591 aa	Known RBP	5.75	□□□□□ -1.49
RPT2	YDL007W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.75	□□□□□ -1.49
RPT2	YDL007W	TY1A-OL	Q92392	440 aa	Known RBP	5.75	□□□□□ -1.49
RPT2	YDL007W	TOR2	P32600	2474 aa	Known RBP	5.75	□□□□□ -1.49
RPT2	YDL007W	CDC6	P09119	513 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	TUP1	P16649	713 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	VPS1	P21576	704 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	RPL5	P26321	297 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	BMH1	P29311	267 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	KAR9	P32526	644 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	GCG1	P32656	232 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	SMY2	P32909	740 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	OAF3	P36023	863 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms