RNA–Protein interactions for RNA: YCR001W

YCR001W, Transcript of Dubious open reading frame, yeast

Gene YCR001W, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR001W	YCR001W	NNF1	P47149	201 aa		4.29	□□□□□ -1.72
YCR001W	YCR001W	CLF1	Q12309	687 aa	Predicted RBP	4.29	□□□□□ -1.72
YCR001W	YCR001W	ICT1	Q12385	394 aa		4.29	□□□□□ -1.72
YCR001W	YCR001W	PEX1	P24004	1043 aa		4.28	□□□□□ -1.72
YCR001W	YCR001W	SET3	P36124	751 aa		4.28	□□□□□ -1.72
YCR001W	YCR001W	GMH1	P36125	273 aa		4.28	□□□□□ -1.72
YCR001W	YCR001W	COX18	P53239	316 aa		4.28	□□□□□ -1.72
YCR001W	YCR001W	HMO1	Q03973	246 aa	Known RBP	4.28	□□□□□ -1.72
YCR001W	YCR001W	YAP7	Q08182	245 aa		4.28	□□□□□ -1.72
YCR001W	YCR001W	MDM12	Q92328	271 aa		4.28	□□□□□ -1.72
YCR001W	YCR001W	HOM2	P13663	365 aa	Known RBP	4.27	□□□□□ -1.73
YCR001W	YCR001W	VPS34	P22543	875 aa		4.27	□□□□□ -1.73
YCR001W	YCR001W	MIH1	P23748	554 aa		4.27	□□□□□ -1.73
YCR001W	YCR001W	HSL7	P38274	827 aa		4.27	□□□□□ -1.73
YCR001W	YCR001W	MUP3	P38734	546 aa		4.27	□□□□□ -1.73
YCR001W	YCR001W	NHX1	Q04121	633 aa		4.27	□□□□□ -1.73
YCR001W	YCR001W	GSY1	P23337	708 aa		4.26	□□□□□ -1.73
YCR001W	YCR001W	VBA3	P25594	458 aa		4.26	□□□□□ -1.73
YCR001W	YCR001W	SRP40	P32583	406 aa	Predicted RBP	4.26	□□□□□ -1.73
YCR001W	YCR001W	YKR018C	P36114	725 aa		4.26	□□□□□ -1.73
YCR001W	YCR001W	DSS1	P39112	969 aa		4.26	□□□□□ -1.73
YCR001W	YCR001W	GID8	P40208	455 aa		4.26	□□□□□ -1.73
YCR001W	YCR001W	NOP9	P47077	666 aa	Known RBP	4.26	□□□□□ -1.73
YCR001W	YCR001W	GLO1	P50107	326 aa		4.26	□□□□□ -1.73
YCR001W	YCR001W	MRK1	P50873	501 aa		4.26	□□□□□ -1.73
YCR001W	YCR001W	PCL10	P53124	433 aa		4.26	□□□□□ -1.73
YCR001W	YCR001W	DIA2	Q08496	732 aa	Predicted RBP	4.26	□□□□□ -1.73
YCR001W	YCR001W	YOL098C	Q12496	1037 aa		4.26	□□□□□ -1.73
YCR001W	YCR001W	ECM3	Q99252	613 aa		4.26	□□□□□ -1.73
YCR001W	YCR001W	KCC4	P25389	1037 aa		4.25	□□□□□ -1.73
YCR001W	YCR001W	TMT1	P32643	299 aa		4.25	□□□□□ -1.73
YCR001W	YCR001W	BCS1	P32839	456 aa		4.25	□□□□□ -1.73
YCR001W	YCR001W	TIM23	P32897	222 aa		4.25	□□□□□ -1.73
YCR001W	YCR001W	YNL195C	P40168	261 aa		4.25	□□□□□ -1.73
YCR001W	YCR001W	YGR151C	P53287	111 aa		4.25	□□□□□ -1.73
YCR001W	YCR001W	SLK19	Q08581	821 aa	Known RBP	4.25	□□□□□ -1.73
YCR001W	YCR001W	OSW1	Q08692	278 aa		4.25	□□□□□ -1.73
YCR001W	YCR001W	RPA135	P22138	1203 aa	Known RBP	4.24	□□□□□ -1.73
YCR001W	YCR001W	HOG1	P32485	435 aa		4.24	□□□□□ -1.73
YCR001W	YCR001W	PIG2	P40187	538 aa		4.24	□□□□□ -1.73
YCR001W	YCR001W	RSC8	P43609	557 aa	Known RBP	4.24	□□□□□ -1.73
YCR001W	YCR001W	SPC98	P53540	846 aa		4.24	□□□□□ -1.73
YCR001W	YCR001W	ARP4	P80428	489 aa		4.24	□□□□□ -1.73
YCR001W	YCR001W	LEE1	Q02799	301 aa	Known RBP	4.24	□□□□□ -1.73
YCR001W	YCR001W	RIM13	Q03792	727 aa		4.24	□□□□□ -1.73
YCR001W	YCR001W	CIT2	P08679	460 aa		4.23	□□□□□ -1.73
YCR001W	YCR001W	ABF1	P14164	731 aa		4.23	□□□□□ -1.73
YCR001W	YCR001W	PRP28	P23394	588 aa		4.23	□□□□□ -1.73
YCR001W	YCR001W	MEF1	P25039	761 aa		4.23	□□□□□ -1.73
YCR001W	YCR001W	BIT2	P38346	545 aa		4.23	□□□□□ -1.73
YCR001W	YCR001W	SEC5	P89102	971 aa		4.23	□□□□□ -1.73
YCR001W	YCR001W	THI22	Q06490	572 aa		4.23	□□□□□ -1.73
YCR001W	YCR001W	SRD1	P09007	221 aa		4.22	□□□□□ -1.73
YCR001W	YCR001W	STE12	P13574	688 aa		4.22	□□□□□ -1.73
YCR001W	YCR001W	YKL091C	P33324	310 aa	Known RBP	4.22	□□□□□ -1.73
YCR001W	YCR001W	APN2	P38207	520 aa		4.22	□□□□□ -1.73
YCR001W	YCR001W	KSP1	P38691	1029 aa	Known RBP	4.22	□□□□□ -1.73
YCR001W	YCR001W	YHR097C	P38809	366 aa	Known RBP	4.22	□□□□□ -1.73
YCR001W	YCR001W	SET2	P46995	733 aa	Known RBP	4.22	□□□□□ -1.73
YCR001W	YCR001W	RPN4	Q03465	531 aa		4.22	□□□□□ -1.73
YCR001W	YCR001W	SEG1	Q04279	960 aa		4.22	□□□□□ -1.73
YCR001W	YCR001W	YDL086W	Q07505	273 aa		4.22	□□□□□ -1.73
YCR001W	YCR001W	CHS5	Q12114	671 aa	Known RBP	4.22	□□□□□ -1.73
YCR001W	YCR001W	YMC2	P38087	329 aa		4.21	□□□□□ -1.74
YCR001W	YCR001W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
YCR001W	YCR001W	DOT6	P40059	670 aa	Known RBP	4.21	□□□□□ -1.74
YCR001W	YCR001W	FMP30	Q02883	468 aa		4.21	□□□□□ -1.74
YCR001W	YCR001W	ERG11	P10614	530 aa		4.2	□□□□□ -1.74
YCR001W	YCR001W	RAD18	P10862	487 aa		4.2	□□□□□ -1.74
YCR001W	YCR001W	SEC6	P32844	805 aa		4.2	□□□□□ -1.74
YCR001W	YCR001W	MNN4	P36044	1178 aa		4.2	□□□□□ -1.74
YCR001W	YCR001W	NUP82	P40368	713 aa		4.2	□□□□□ -1.74
YCR001W	YCR001W	NMA2	P53204	395 aa		4.2	□□□□□ -1.74
YCR001W	YCR001W	BRE5	P53741	515 aa	Known RBP	4.2	□□□□□ -1.74
YCR001W	YCR001W	LAM4	P38800	1345 aa		4.2	□□□□□ -1.74
YCR001W	YCR001W	SAT4	P25333	603 aa	Known RBP	4.19	□□□□□ -1.74
YCR001W	YCR001W	FEN2	P25621	512 aa	Known RBP	4.19	□□□□□ -1.74
YCR001W	YCR001W	MIT1	P40002	666 aa		4.19	□□□□□ -1.74
YCR001W	YCR001W	MPS3	P47069	682 aa		4.19	□□□□□ -1.74
YCR001W	YCR001W	ISA1	Q07821	250 aa	Predicted RBP	4.19	□□□□□ -1.74
YCR001W	YCR001W	PHO5	P00635	467 aa		4.18	□□□□□ -1.74
YCR001W	YCR001W	ADE5,7	P07244	802 aa	Known RBP	4.18	□□□□□ -1.74
YCR001W	YCR001W	PTP1	P25044	335 aa		4.18	□□□□□ -1.74
YCR001W	YCR001W	CTP1	P38152	299 aa		4.18	□□□□□ -1.74
YCR001W	YCR001W	PMC1	P38929	1173 aa	Predicted RBP	4.18	□□□□□ -1.74
YCR001W	YCR001W	BUD6	P41697	788 aa		4.18	□□□□□ -1.74
YCR001W	YCR001W	RFX1	P48743	811 aa		4.18	□□□□□ -1.74
YCR001W	YCR001W	AIM14	P53109	570 aa		4.18	□□□□□ -1.74
YCR001W	YCR001W	BMS1	Q08965	1183 aa	Known RBP	4.18	□□□□□ -1.74
YCR001W	YCR001W	YLR125W	Q12138	136 aa		4.18	□□□□□ -1.74
YCR001W	YCR001W	PHO8	P11491	566 aa		4.17	□□□□□ -1.74
YCR001W	YCR001W	YMC1	P32331	307 aa		4.17	□□□□□ -1.74
YCR001W	YCR001W	UGP1	P32861	499 aa	Known RBP	4.17	□□□□□ -1.74
YCR001W	YCR001W	PEX6	P33760	1030 aa		4.17	□□□□□ -1.74
YCR001W	YCR001W	APL3	P38065	1025 aa		4.17	□□□□□ -1.74
YCR001W	YCR001W	AKL1	P38080	1108 aa	Known RBP	4.17	□□□□□ -1.74
YCR001W	YCR001W	SSZ1	P38788	538 aa	Known RBP	4.17	□□□□□ -1.74
YCR001W	YCR001W	KHA1	P40309	873 aa		4.17	□□□□□ -1.74
YCR001W	YCR001W	YIL077C	P40508	320 aa		4.17	□□□□□ -1.74
YCR001W	YCR001W	ATG33	Q06485	197 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms