RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A NTO1Q12311 748 aa2.61□□□□□ -1.99
VMA9YCL005W-A TRM11Q12463 433 aa2.61□□□□□ -1.99
VMA9YCL005W-A MHP1P43638 1398 aa2.61□□□□□ -1.99
VMA9YCL005W-A SPT6P23615 1451 aaKnown RBP2.6□□□□□ -1.99
VMA9YCL005W-A RPP2AP05319 106 aaKnown RBP2.6□□□□□ -1.99
VMA9YCL005W-A RPS21AP0C0V8 87 aaKnown RBP2.6□□□□□ -1.99
VMA9YCL005W-A YCR015CP25616 317 aa2.6□□□□□ -1.99
VMA9YCL005W-A HRR25P29295 494 aaKnown RBP2.6□□□□□ -1.99
VMA9YCL005W-A MIC60P36112 540 aa2.6□□□□□ -1.99
VMA9YCL005W-A CKB2P38930 258 aa2.6□□□□□ -1.99
VMA9YCL005W-A PMT3P47190 753 aa2.6□□□□□ -1.99
VMA9YCL005W-A MUP1P50276 574 aa2.6□□□□□ -1.99
VMA9YCL005W-A TEX1P53851 422 aaKnown RBP2.6□□□□□ -1.99
VMA9YCL005W-A ECM9Q02202 377 aa2.6□□□□□ -1.99
VMA9YCL005W-A YLR040CQ07988 224 aa2.6□□□□□ -1.99
VMA9YCL005W-A ENB1Q08299 606 aa2.6□□□□□ -1.99
VMA9YCL005W-A FAP7Q12055 197 aaPredicted RBP2.6□□□□□ -1.99
VMA9YCL005W-A LSP1Q12230 341 aaKnown RBP2.6□□□□□ -1.99
VMA9YCL005W-A TMA17Q12513 150 aa2.6□□□□□ -1.99
VMA9YCL005W-A SWR1Q05471 1514 aa2.59□□□□□ -1.99
VMA9YCL005W-A SRP54P20424 541 aaKnown RBP2.59□□□□□ -1.99
VMA9YCL005W-A MSP1P28737 362 aa2.59□□□□□ -1.99
VMA9YCL005W-A EFT1P32324 842 aaKnown RBP2.59□□□□□ -1.99
VMA9YCL005W-A SER1P33330 395 aaKnown RBP2.59□□□□□ -1.99
VMA9YCL005W-A YKL222CP35995 705 aa2.59□□□□□ -1.99
VMA9YCL005W-A MAL31P38156 614 aa2.59□□□□□ -1.99
VMA9YCL005W-A FAT1P38225 669 aa2.59□□□□□ -1.99
VMA9YCL005W-A YBR053CP38235 358 aa2.59□□□□□ -1.99
VMA9YCL005W-A LYS9P38999 446 aa2.59□□□□□ -1.99
VMA9YCL005W-A HXT6P39003 570 aaKnown RBP2.59□□□□□ -1.99
VMA9YCL005W-A HXT7P39004 570 aa2.59□□□□□ -1.99
VMA9YCL005W-A OAF1P39720 1047 aaPredicted RBP2.59□□□□□ -1.99
VMA9YCL005W-A RIO2P40160 425 aaKnown RBP2.59□□□□□ -1.99
VMA9YCL005W-A NDC80P40460 691 aa2.59□□□□□ -1.99
VMA9YCL005W-A YGR153WP48238 217 aa2.59□□□□□ -1.99
VMA9YCL005W-A PRP31P49704 494 aaPredicted RBP2.59□□□□□ -1.99
VMA9YCL005W-A MTL1P53214 551 aa2.59□□□□□ -1.99
VMA9YCL005W-A SUN4P53616 420 aa2.59□□□□□ -1.99
VMA9YCL005W-A IRC13Q08630 104 aa2.59□□□□□ -1.99
VMA9YCL005W-A ECM3Q99252 613 aa2.59□□□□□ -1.99
VMA9YCL005W-A HRP1Q99383 534 aaKnown RBP2.59□□□□□ -1.99
VMA9YCL005W-A RAD9P14737 1309 aa2.59□□□□□ -2
VMA9YCL005W-A TRM732Q03496 1420 aa2.59□□□□□ -2
VMA9YCL005W-A TRP4P07285 380 aaPredicted RBP2.58□□□□□ -2
VMA9YCL005W-A PCT1P13259 424 aa2.58□□□□□ -2
VMA9YCL005W-A KAR3P17119 729 aa2.58□□□□□ -2
VMA9YCL005W-A PET123P17558 318 aa2.58□□□□□ -2
VMA9YCL005W-A ERG4P25340 473 aa2.58□□□□□ -2
VMA9YCL005W-A IMG2P25642 146 aaPredicted RBP2.58□□□□□ -2
VMA9YCL005W-A RKM3P38222 552 aa2.58□□□□□ -2
VMA9YCL005W-A TDA3P38758 523 aa2.58□□□□□ -2
VMA9YCL005W-A SSZ1P38788 538 aaKnown RBP2.58□□□□□ -2
VMA9YCL005W-A YHR202WP38887 602 aa2.58□□□□□ -2
VMA9YCL005W-A GET2P40056 285 aa2.58□□□□□ -2
VMA9YCL005W-A ELO3P40319 345 aa2.58□□□□□ -2
VMA9YCL005W-A BUD27P43573 796 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
VMA9YCL005W-A RET2P43621 546 aa2.58□□□□□ -2
VMA9YCL005W-A YJR039WP47107 1121 aa2.58□□□□□ -2
VMA9YCL005W-A ORC4P54791 529 aa2.58□□□□□ -2
VMA9YCL005W-A ARG5,6Q01217 863 aa2.58□□□□□ -2
VMA9YCL005W-A RCR2Q03446 210 aaKnown RBP2.58□□□□□ -2
VMA9YCL005W-A YPS7Q06325 596 aa2.58□□□□□ -2
VMA9YCL005W-A VPS36Q06696 566 aa2.58□□□□□ -2
VMA9YCL005W-A SFI1Q12369 946 aa2.58□□□□□ -2
VMA9YCL005W-A EDE1P34216 1381 aa2.58□□□□□ -2
VMA9YCL005W-A SRB8P25648 1427 aa2.58□□□□□ -2
VMA9YCL005W-A MMS1Q06211 1407 aa2.58□□□□□ -2
VMA9YCL005W-A ARD1P07347 238 aaPredicted RBP2.57□□□□□ -2
VMA9YCL005W-A PYC1P11154 1178 aaKnown RBP2.57□□□□□ -2
VMA9YCL005W-A EFB1P32471 206 aaKnown RBP2.57□□□□□ -2
VMA9YCL005W-A EUG1P32474 517 aa2.57□□□□□ -2
VMA9YCL005W-A AKL1P38080 1108 aaKnown RBP2.57□□□□□ -2
VMA9YCL005W-A SUL1P38359 859 aa2.57□□□□□ -2
VMA9YCL005W-A BEM4P39011 633 aa2.57□□□□□ -2
VMA9YCL005W-A CIN4P39110 191 aa2.57□□□□□ -2
VMA9YCL005W-A RSM25P40496 264 aa2.57□□□□□ -2
VMA9YCL005W-A DJP1P40564 432 aa2.57□□□□□ -2
VMA9YCL005W-A SET2P46995 733 aaKnown RBP2.57□□□□□ -2
VMA9YCL005W-A VPS4P52917 437 aa2.57□□□□□ -2
VMA9YCL005W-A COX18P53239 316 aa2.57□□□□□ -2
VMA9YCL005W-A MDG1P53885 366 aa2.57□□□□□ -2
VMA9YCL005W-A YMR206WQ03695 313 aa2.57□□□□□ -2
VMA9YCL005W-A YHM2Q04013 314 aa2.57□□□□□ -2
VMA9YCL005W-A ECM16Q04217 1267 aaKnown RBP2.57□□□□□ -2
VMA9YCL005W-A YLR407WQ06070 228 aa2.57□□□□□ -2
VMA9YCL005W-A ISA1Q07821 250 aaPredicted RBP2.57□□□□□ -2
VMA9YCL005W-A ETT1Q08421 412 aaKnown RBP2.57□□□□□ -2
VMA9YCL005W-A GLE1Q12315 538 aa2.57□□□□□ -2
VMA9YCL005W-A CAF20P12962 161 aaKnown RBP2.56□□□□□ -2
VMA9YCL005W-A GLN4P13188 809 aaKnown RBP2.56□□□□□ -2
VMA9YCL005W-A RNR1P21524 888 aaKnown RBP2.56□□□□□ -2
VMA9YCL005W-A ATP12P22135 325 aa2.56□□□□□ -2
VMA9YCL005W-A SEC65P29478 273 aa2.56□□□□□ -2
VMA9YCL005W-A NGG1P32494 702 aa2.56□□□□□ -2
VMA9YCL005W-A TOA1P32773 286 aa2.56□□□□□ -2
VMA9YCL005W-A YKU70P32807 602 aa2.56□□□□□ -2
VMA9YCL005W-A SWH1P35845 1188 aa2.56□□□□□ -2
VMA9YCL005W-A APL2P36000 726 aaPredicted RBP2.56□□□□□ -2
VMA9YCL005W-A OAF3P36023 863 aa2.56□□□□□ -2
VMA9YCL005W-A PPS1P38148 807 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms