RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 KLRG2A4D1S0 409 aaPredicted RBP12.87□□□□□ -0.35
CASC19-247ENST00000641642 COL9A1P20849 921 aa12.87□□□□□ -0.35
CASC19-247ENST00000641642 PDE6BP35913 854 aa12.87□□□□□ -0.35
CASC19-247ENST00000641642 CTSWP56202 376 aa12.87□□□□□ -0.35
CASC19-247ENST00000641642 FOXO4P98177 505 aa12.87□□□□□ -0.35
CASC19-247ENST00000641642 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
CASC19-247ENST00000641642 ERFEQ4G0M1 354 aa12.87□□□□□ -0.35
CASC19-247ENST00000641642 CCDC152Q4G0S7 254 aa12.87□□□□□ -0.35
CASC19-247ENST00000641642 CEP85Q6P2H3 762 aa12.87□□□□□ -0.35
CASC19-247ENST00000641642 PDGFDQ9GZP0 370 aaPredicted RBP12.87□□□□□ -0.35
CASC19-247ENST00000641642 BICC1Q9H694 974 aaKnown RBP12.87□□□□□ -0.35
CASC19-247ENST00000641642 PPP4R2Q9NY27 417 aa12.87□□□□□ -0.35
CASC19-247ENST00000641642 FAM177BA6PVY3 158 aa12.86□□□□□ -0.35
CASC19-247ENST00000641642 MSL1Q68DK7 614 aa12.86□□□□□ -0.35
CASC19-247ENST00000641642 NUTM1Q86Y26 1132 aa12.86□□□□□ -0.35
CASC19-247ENST00000641642 TTLL11Q8NHH1 800 aa12.86□□□□□ -0.35
CASC19-247ENST00000641642 SSH3Q8TE77 659 aa12.86□□□□□ -0.35
CASC19-247ENST00000641642 RWDD1Q9H446 243 aaPredicted RBP12.86□□□□□ -0.35
CASC19-247ENST00000641642 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
CASC19-247ENST00000641642 DDX60Q8IY21 1712 aaKnown RBP12.85□□□□□ -0.35
CASC19-247ENST00000641642 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
CASC19-247ENST00000641642 ZBTB7AO95365 584 aa12.85□□□□□ -0.35
CASC19-247ENST00000641642 CCDC57Q2TAC2 916 aa12.85□□□□□ -0.35
CASC19-247ENST00000641642 CRY2Q49AN0 593 aa12.85□□□□□ -0.35
CASC19-247ENST00000641642 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
CASC19-247ENST00000641642 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
CASC19-247ENST00000641642 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
CASC19-247ENST00000641642 SRGAP3O43295 1099 aa12.84□□□□□ -0.35
CASC19-247ENST00000641642 HCLS1P14317 486 aaPredicted RBP12.84□□□□□ -0.35
CASC19-247ENST00000641642 IFIT5Q13325 482 aaKnown RBP12.84□□□□□ -0.35
CASC19-247ENST00000641642 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
CASC19-247ENST00000641642 HSP90AB4PQ58FF6 505 aa12.84□□□□□ -0.35
CASC19-247ENST00000641642 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
CASC19-247ENST00000641642 ABCC12Q96J65 1359 aa12.83□□□□□ -0.36
CASC19-247ENST00000641642 ANKRD18BA2A2Z9 1011 aa12.83□□□□□ -0.36
CASC19-247ENST00000641642 HOXA10P31260 410 aaPredicted RBP12.83□□□□□ -0.36
CASC19-247ENST00000641642 TGFB2P61812 414 aa12.83□□□□□ -0.36
CASC19-247ENST00000641642 EPHA10Q5JZY3 1008 aa12.83□□□□□ -0.36
CASC19-247ENST00000641642 JARID2Q92833 1246 aaPredicted RBP12.83□□□□□ -0.36
CASC19-247ENST00000641642 GCC1Q96CN9 775 aa12.83□□□□□ -0.36
CASC19-247ENST00000641642 CDC5LQ99459 802 aaKnown RBP12.83□□□□□ -0.36
CASC19-247ENST00000641642 C1orf115Q9H7X2 142 aa12.83□□□□□ -0.36
CASC19-247ENST00000641642 COPRSQ9NQ92 184 aa12.83□□□□□ -0.36
CASC19-247ENST00000641642 CD2APQ9Y5K6 639 aa12.83□□□□□ -0.36
CASC19-247ENST00000641642 C10orf71Q711Q0 1435 aa12.82□□□□□ -0.36
CASC19-247ENST00000641642 ALDH1B1P30837 517 aa12.82□□□□□ -0.36
CASC19-247ENST00000641642 DDX46Q7L014 1031 aaKnown RBP12.82□□□□□ -0.36
CASC19-247ENST00000641642 TMC4Q7Z404 712 aa12.82□□□□□ -0.36
CASC19-247ENST00000641642 SIRT2Q8IXJ6 389 aa12.82□□□□□ -0.36
CASC19-247ENST00000641642 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
CASC19-247ENST00000641642 EPAS1Q99814 870 aa12.82□□□□□ -0.36
CASC19-247ENST00000641642 NOP58Q9Y2X3 529 aaKnown RBP12.82□□□□□ -0.36
CASC19-247ENST00000641642 KIF13BQ9NQT8 1826 aa12.82□□□□□ -0.36
CASC19-247ENST00000641642 PNMA6EA0A0J9YXQ4 647 aa12.81□□□□□ -0.36
CASC19-247ENST00000641642 H0YIN7 160 aa12.81□□□□□ -0.36
CASC19-247ENST00000641642 RAB11FIP3O75154 756 aa12.81□□□□□ -0.36
CASC19-247ENST00000641642 NPR1P16066 1061 aa12.81□□□□□ -0.36
CASC19-247ENST00000641642 ITGA6P23229 1130 aa12.81□□□□□ -0.36
CASC19-247ENST00000641642 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
CASC19-247ENST00000641642 MASTLQ96GX5 879 aa12.81□□□□□ -0.36
CASC19-247ENST00000641642 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
CASC19-247ENST00000641642 CCDC136Q96JN2 1154 aa12.81□□□□□ -0.36
CASC19-247ENST00000641642 GREM2Q9H772 168 aa12.81□□□□□ -0.36
CASC19-247ENST00000641642 DCTPP1Q9H773 170 aa12.81□□□□□ -0.36
CASC19-247ENST00000641642 CHMP3Q9Y3E7 222 aa12.81□□□□□ -0.36
CASC19-247ENST00000641642 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 DPYSL4O14531 572 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 BBOX1O75936 387 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 CIAO1O76071 339 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 RGS20O76081 388 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 SRGNP10124 158 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 IGHMBP2P38935 993 aaKnown RBP12.8□□□□□ -0.36
CASC19-247ENST00000641642 RFX5P48382 616 aaPredicted RBP12.8□□□□□ -0.36
CASC19-247ENST00000641642 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
CASC19-247ENST00000641642 FAM161AQ3B820 660 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 TAF7LQ5H9L4 462 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 STYK1Q6J9G0 422 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 ERC1Q8IUD2 1116 aa12.8□□□□□ -0.36
CASC19-247ENST00000641642 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
CASC19-247ENST00000641642 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
CASC19-247ENST00000641642 G3BP1Q13283 466 aaKnown RBP eCLIP12.79□□□□□ -0.36
CASC19-247ENST00000641642 GRAPQ13588 217 aa12.79□□□□□ -0.36
CASC19-247ENST00000641642 CENPQQ7L2Z9 268 aaPredicted RBP12.79□□□□□ -0.36
CASC19-247ENST00000641642 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
CASC19-247ENST00000641642 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
CASC19-247ENST00000641642 GRAPLQ8TC17 118 aaPredicted RBP12.79□□□□□ -0.36
CASC19-247ENST00000641642 CNKSR1Q969H4 720 aa12.79□□□□□ -0.36
CASC19-247ENST00000641642 BSDC1Q9NW68 430 aaPredicted RBP12.79□□□□□ -0.36
CASC19-247ENST00000641642 GTF3C3Q9Y5Q9 886 aa12.79□□□□□ -0.36
CASC19-247ENST00000641642 EYA2O00167 538 aa12.78□□□□□ -0.36
CASC19-247ENST00000641642 SURF6O75683 361 aaKnown RBP12.78□□□□□ -0.36
CASC19-247ENST00000641642 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
CASC19-247ENST00000641642 GRIPAP1Q4V328 841 aa12.78□□□□□ -0.36
CASC19-247ENST00000641642 C2CD5Q86YS7 1000 aa12.78□□□□□ -0.36
CASC19-247ENST00000641642 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
CASC19-247ENST00000641642 TNRC6CQ9HCJ0 1690 aaKnown RBP12.77□□□□□ -0.36
CASC19-247ENST00000641642 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
CASC19-247ENST00000641642 LDHAL6AQ6ZMR3 332 aa12.77□□□□□ -0.37
CASC19-247ENST00000641642 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms