RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CCDC129Q6ZRS4 1044 aa20.69■□□□□ 0.9
PHGDH-208ENST00000641023 TRIM37O94972 964 aa20.69■□□□□ 0.9
PHGDH-208ENST00000641023 ARID4AP29374 1257 aaPredicted RBP20.69■□□□□ 0.9
PHGDH-208ENST00000641023 TSGA10IPQ3SY00 556 aa20.69■□□□□ 0.9
PHGDH-208ENST00000641023 VPS53Q5VIR6 699 aa20.69■□□□□ 0.9
PHGDH-208ENST00000641023 NOL8Q76FK4 1167 aaKnown RBP20.69■□□□□ 0.9
PHGDH-208ENST00000641023 RUFY3Q7L099 469 aa20.69■□□□□ 0.9
PHGDH-208ENST00000641023 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.69■□□□□ 0.91e-14■□□□□ 11
PHGDH-208ENST00000641023 AK2P54819 239 aa20.68■□□□□ 0.9
PHGDH-208ENST00000641023 CHRNDQ07001 517 aa20.68■□□□□ 0.9
PHGDH-208ENST00000641023 KRT32Q14532 448 aa20.68■□□□□ 0.9
PHGDH-208ENST00000641023 ZSCAN25Q6NSZ9 544 aa20.68■□□□□ 0.9
PHGDH-208ENST00000641023 ZGPATQ8N5A5 531 aaKnown RBP20.68■□□□□ 0.9
PHGDH-208ENST00000641023 TNPO1Q92973 898 aaKnown RBP20.68■□□□□ 0.9
PHGDH-208ENST00000641023 DSCC1Q9BVC3 393 aa20.68■□□□□ 0.9
PHGDH-208ENST00000641023 PDRG1Q9NUG6 133 aa20.68■□□□□ 0.9
PHGDH-208ENST00000641023 PHKA1P46020 1223 aa20.67■□□□□ 0.9
PHGDH-208ENST00000641023 PI16Q6UXB8 463 aa20.67■□□□□ 0.9
PHGDH-208ENST00000641023 BSDC1Q9NW68 430 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-208ENST00000641023 LIMCH1Q9UPQ0 1083 aa20.67■□□□□ 0.9
PHGDH-208ENST00000641023 NPHP1O15259 732 aa20.66■□□□□ 0.9
PHGDH-208ENST00000641023 MCM4P33991 863 aa20.66■□□□□ 0.9
PHGDH-208ENST00000641023 C3orf67Q6ZVT6 689 aa20.66■□□□□ 0.9
PHGDH-208ENST00000641023 MAST3O60307 1309 aa20.66■□□□□ 0.9
PHGDH-208ENST00000641023 WASHC4Q2M389 1173 aa20.66■□□□□ 0.9
PHGDH-208ENST00000641023 GBP4Q96PP9 640 aa20.66■□□□□ 0.9
PHGDH-208ENST00000641023 RPAP1Q9BWH6 1393 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-208ENST00000641023 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.65■□□□□ 0.9
PHGDH-208ENST00000641023 SLFNL1Q499Z3 407 aa20.65■□□□□ 0.9
PHGDH-208ENST00000641023 BLOC1S2Q6QNY1 142 aa20.65■□□□□ 0.9
PHGDH-208ENST00000641023 CYP2E1P05181 493 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-208ENST00000641023 CPA1P15085 419 aa20.65■□□□□ 0.9
PHGDH-208ENST00000641023 APPBP2Q92624 585 aa20.65■□□□□ 0.9
PHGDH-208ENST00000641023 OSBP2Q969R2 916 aa20.65■□□□□ 0.9
PHGDH-208ENST00000641023 BRWD3Q6RI45 1802 aa20.64■□□□□ 0.9
PHGDH-208ENST00000641023 CARMIL3Q8ND23 1372 aa20.64■□□□□ 0.9
PHGDH-208ENST00000641023 COL24A1Q17RW2 1714 aa20.64■□□□□ 0.89
PHGDH-208ENST00000641023 EP400Q96L91 3159 aa20.64■□□□□ 0.89
PHGDH-208ENST00000641023 HSPD1P10809 573 aaKnown RBP20.63■□□□□ 0.89
PHGDH-208ENST00000641023 SPATA5Q8NB90 893 aa20.63■□□□□ 0.89
PHGDH-208ENST00000641023 SNAP23O00161 211 aa20.63■□□□□ 0.89
PHGDH-208ENST00000641023 ZSCAN31Q96LW9 406 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-208ENST00000641023 ARAP2Q8WZ64 1704 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 AKAP11Q9UKA4 1901 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 DDX11L8A8MPP1 907 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 M0R2C6 588 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 CYP21A2P08686 494 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 RPS8P62241 208 aaKnown RBP20.62■□□□□ 0.89
PHGDH-208ENST00000641023 NFIXQ14938 502 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 ANKRD1Q15327 319 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 SLC9C2Q5TAH2 1124 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 CELF1Q92879 486 aaKnown RBP20.62■□□□□ 0.89
PHGDH-208ENST00000641023 C4AP0C0L4 1744 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 IDH1O75874 414 aaKnown RBP20.62■□□□□ 0.89
PHGDH-208ENST00000641023 UBE4AQ14139 1066 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 NEK1Q96PY6 1258 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 MINPP1Q9UNW1 487 aa20.62■□□□□ 0.89
PHGDH-208ENST00000641023 RPS6KB1P23443 525 aa20.61■□□□□ 0.89
PHGDH-208ENST00000641023 ADD2P35612 726 aa20.61■□□□□ 0.89
PHGDH-208ENST00000641023 UBE3CQ15386 1083 aa20.61■□□□□ 0.89
PHGDH-208ENST00000641023 ALDH8A1Q9H2A2 487 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-208ENST00000641023 SH2B1Q9NRF2 756 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-208ENST00000641023 BCAMP50895 628 aa20.6■□□□□ 0.89
PHGDH-208ENST00000641023 RASGRF1Q13972 1273 aa20.6■□□□□ 0.89
PHGDH-208ENST00000641023 TXNRD1Q16881 649 aa20.6■□□□□ 0.89
PHGDH-208ENST00000641023 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.6■□□□□ 0.89
PHGDH-208ENST00000641023 TAF6LQ9Y6J9 622 aa20.6■□□□□ 0.89
PHGDH-208ENST00000641023 CNBD1Q8NA66 436 aa20.6■□□□□ 0.89
PHGDH-208ENST00000641023 PUS7LQ9H0K6 701 aaKnown RBP20.6■□□□□ 0.89
PHGDH-208ENST00000641023 PIH1D3Q9NQM4 214 aaKnown RBP20.6■□□□□ 0.89
PHGDH-208ENST00000641023 CTNNA3Q9UI47 895 aa20.6■□□□□ 0.89
PHGDH-208ENST00000641023 HMGB1P09429 215 aaKnown RBP20.59■□□□□ 0.89
PHGDH-208ENST00000641023 CLEC17AQ6ZS10 378 aa20.59■□□□□ 0.89
PHGDH-208ENST00000641023 CCDC24Q8N4L8 307 aa20.59■□□□□ 0.89
PHGDH-208ENST00000641023 GNL3LQ9NVN8 582 aaKnown RBP20.59■□□□□ 0.89
PHGDH-208ENST00000641023 MAP3K12Q12852 859 aa20.58■□□□□ 0.89
PHGDH-208ENST00000641023 GYS1P13807 737 aa20.58■□□□□ 0.88
PHGDH-208ENST00000641023 CAVIN4Q5BKX8 364 aa20.58■□□□□ 0.88
PHGDH-208ENST00000641023 LARP6Q9BRS8 491 aaKnown RBP20.58■□□□□ 0.88
PHGDH-208ENST00000641023 ANKRD2Q9GZV1 360 aa20.58■□□□□ 0.88
PHGDH-208ENST00000641023 GPAA1O43292 621 aa20.57■□□□□ 0.88
PHGDH-208ENST00000641023 PTMSP20962 102 aa20.57■□□□□ 0.88
PHGDH-208ENST00000641023 PKP1Q13835 747 aa20.57■□□□□ 0.88
PHGDH-208ENST00000641023 COL4A1P02462 1669 aa20.57■□□□□ 0.88
PHGDH-208ENST00000641023 UBR3Q6ZT12 1888 aa20.57■□□□□ 0.88
PHGDH-208ENST00000641023 GOLGA6L22H0YM25 854 aa20.57■□□□□ 0.88
PHGDH-208ENST00000641023 PLSCR1O15162 318 aa20.57■□□□□ 0.88
PHGDH-208ENST00000641023 RXRBP28702 533 aa20.57■□□□□ 0.88
PHGDH-208ENST00000641023 PROM2Q8N271 834 aa20.57■□□□□ 0.88
PHGDH-208ENST00000641023 ZNF532Q9HCE3 1301 aa20.56■□□□□ 0.88
PHGDH-208ENST00000641023 PDE6AP16499 860 aa20.56■□□□□ 0.88
PHGDH-208ENST00000641023 TM4SF1P30408 202 aa20.56■□□□□ 0.88
PHGDH-208ENST00000641023 MYH7P12883 1935 aa20.56■□□□□ 0.88
PHGDH-208ENST00000641023 CASZ1Q86V15 1759 aa20.55■□□□□ 0.88
PHGDH-208ENST00000641023 VPS37DQ86XT2 251 aa20.55■□□□□ 0.88
PHGDH-208ENST00000641023 ZNF804BA4D1E1 1349 aa20.55■□□□□ 0.88
PHGDH-208ENST00000641023 IMMTQ16891 758 aaKnown RBP20.55■□□□□ 0.88
PHGDH-208ENST00000641023 TPCN1Q9ULQ1 816 aa20.55■□□□□ 0.88
PHGDH-208ENST00000641023 ME3Q16798 604 aa20.54■□□□□ 0.88
PHGDH-208ENST00000641023 PRR5LQ6MZQ0 368 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms