RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ADAM21Q9UKJ8 722 aa15.96■□□□□ 0.15
SCARB2-227ENST00000640957 PCDHA7Q9UN72 937 aa15.96■□□□□ 0.15
SCARB2-227ENST00000640957 CDK12Q9NYV4 1490 aaPredicted RBP15.96■□□□□ 0.15
SCARB2-227ENST00000640957 NEMFO60524 1076 aa15.96■□□□□ 0.15
SCARB2-227ENST00000640957 ADKP55263 362 aaKnown RBP15.96■□□□□ 0.15
SCARB2-227ENST00000640957 DDX46Q7L014 1031 aaKnown RBP15.96■□□□□ 0.15
SCARB2-227ENST00000640957 GDAP1L1Q96MZ0 367 aa15.96■□□□□ 0.15
SCARB2-227ENST00000640957 ZRANB2O95218 330 aaKnown RBP eCLIP15.95■□□□□ 0.14
SCARB2-227ENST00000640957 PROSER3Q2NL68 480 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 DNAAF4Q8WXU2 420 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 EVI5LQ96CN4 794 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 NEK1Q96PY6 1258 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 PARD6BQ9BYG5 372 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 L2HGDHQ9H9P8 463 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 CLIC4Q9Y696 253 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 PTPDC1A2A3K4 754 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 CDC25BP30305 580 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 POLA2Q14181 598 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 CCDC93Q567U6 631 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 RNF20Q5VTR2 975 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 SARM1Q6SZW1 724 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 CPLX3Q8WVH0 158 aa15.95■□□□□ 0.14
SCARB2-227ENST00000640957 DHX16O60231 1041 aaKnown RBP15.94■□□□□ 0.14
SCARB2-227ENST00000640957 ADD1P35611 737 aaKnown RBP15.94■□□□□ 0.14
SCARB2-227ENST00000640957 SPECC1Q5M775 1068 aa15.94■□□□□ 0.14
SCARB2-227ENST00000640957 GPATCH3Q96I76 525 aa15.94■□□□□ 0.14
SCARB2-227ENST00000640957 TM6SF1Q9BZW5 370 aa15.94■□□□□ 0.14
SCARB2-227ENST00000640957 PDE11AQ9HCR9 933 aa15.94■□□□□ 0.14
SCARB2-227ENST00000640957 LZTFL1Q9NQ48 299 aa15.94■□□□□ 0.14
SCARB2-227ENST00000640957 GTF2A1P52655 376 aaPredicted RBP15.94■□□□□ 0.14
SCARB2-227ENST00000640957 STK38Q15208 465 aa15.94■□□□□ 0.14
SCARB2-227ENST00000640957 CC2D1AQ6P1N0 951 aaPredicted RBP15.94■□□□□ 0.14
SCARB2-227ENST00000640957 REXO1L1PQ8IX06 675 aa15.94■□□□□ 0.14
SCARB2-227ENST00000640957 RRP15Q9Y3B9 282 aaKnown RBP15.94■□□□□ 0.14
SCARB2-227ENST00000640957 SASH1O94885 1247 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 RHOXF2BP0C7M4 288 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 FANCCQ00597 558 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 PPARDQ03181 441 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 FAM160A1Q05DH4 1040 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 G3BP1Q13283 466 aaKnown RBP eCLIP15.93■□□□□ 0.14
SCARB2-227ENST00000640957 RHOXF2Q9BQY4 288 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 MAP3K2Q9Y2U5 619 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 TADA3O75528 432 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 TXLNBQ8N3L3 684 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 UBASH3AP57075 661 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 GSDMDP57764 484 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 GPS2Q13227 327 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 IL17RAQ96F46 866 aa15.93■□□□□ 0.14
SCARB2-227ENST00000640957 CYP21A2P08686 494 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 IBSPP21815 317 aaPredicted RBP15.92■□□□□ 0.14
SCARB2-227ENST00000640957 MTF1Q14872 753 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 CHRNA2Q15822 529 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 TRIM65Q6PJ69 517 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 RIC3Q7Z5B4 369 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 NAT10Q9H0A0 1025 aaKnown RBP15.92■□□□□ 0.14
SCARB2-227ENST00000640957 USP6P35125 1406 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 HAND2P61296 217 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 BEND3Q5T5X7 828 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 CREBRFQ8IUR6 639 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 DHX58Q96C10 678 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 SRRTQ9BXP5 876 aaKnown RBP15.92■□□□□ 0.14
SCARB2-227ENST00000640957 ARFGAP3Q9NP61 516 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 PARP3Q9Y6F1 533 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 RICTORQ6R327 1708 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 MTX1Q13505 466 aa15.92■□□□□ 0.14
SCARB2-227ENST00000640957 AOX1Q06278 1338 aa15.91■□□□□ 0.14
SCARB2-227ENST00000640957 NRDCO43847 1150 aa15.91■□□□□ 0.14
SCARB2-227ENST00000640957 CTDNEP1O95476 244 aa15.91■□□□□ 0.14
SCARB2-227ENST00000640957 SLC3A2P08195 630 aaKnown RBP15.91■□□□□ 0.14
SCARB2-227ENST00000640957 PPP2R3AQ06190 1150 aa15.91■□□□□ 0.14
SCARB2-227ENST00000640957 ANKRD1Q15327 319 aa15.91■□□□□ 0.14
SCARB2-227ENST00000640957 TOGARAM2Q6ZUX3 1019 aa15.91■□□□□ 0.14
SCARB2-227ENST00000640957 STOX1Q6ZVD7 989 aa15.91■□□□□ 0.14
SCARB2-227ENST00000640957 CCDC102AQ96A19 550 aa15.91■□□□□ 0.14
SCARB2-227ENST00000640957 CASQ1P31415 396 aa15.91■□□□□ 0.14
SCARB2-227ENST00000640957 HSP90AB3PQ58FF7 597 aa15.91■□□□□ 0.14
SCARB2-227ENST00000640957 BICC1Q9H694 974 aaKnown RBP15.91■□□□□ 0.14
SCARB2-227ENST00000640957 ENGASEQ8NFI3 743 aa15.9■□□□□ 0.14
SCARB2-227ENST00000640957 CCDC12Q8WUD4 166 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-227ENST00000640957 MRPS27Q92552 414 aaKnown RBP15.9■□□□□ 0.14
SCARB2-227ENST00000640957 KIAA1468Q9P260 1216 aa15.9■□□□□ 0.14
SCARB2-227ENST00000640957 COBLO75128 1261 aa15.9■□□□□ 0.14
SCARB2-227ENST00000640957 TAF5LO75529 589 aa15.9■□□□□ 0.14
SCARB2-227ENST00000640957 RXRAP19793 462 aa15.9■□□□□ 0.14
SCARB2-227ENST00000640957 ILDR1Q86SU0 546 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-227ENST00000640957 PNOCQ13519 176 aa15.9■□□□□ 0.14
SCARB2-227ENST00000640957 ZNF827Q17R98 1081 aa15.9■□□□□ 0.14
SCARB2-227ENST00000640957 TAF7LQ5H9L4 462 aa15.9■□□□□ 0.14
SCARB2-227ENST00000640957 TRMT44Q8IYL2 757 aaKnown RBP15.9■□□□□ 0.14
SCARB2-227ENST00000640957 NSUN7Q8NE18 718 aaKnown RBP15.9■□□□□ 0.14
SCARB2-227ENST00000640957 SUCLG2Q96I99 432 aa15.9■□□□□ 0.14
SCARB2-227ENST00000640957 FAN1Q9Y2M0 1017 aa15.9■□□□□ 0.14
SCARB2-227ENST00000640957 LONRF2Q1L5Z9 754 aa15.89■□□□□ 0.13
SCARB2-227ENST00000640957 LONRF3Q496Y0 759 aa15.89■□□□□ 0.13
SCARB2-227ENST00000640957 PROSER2Q86WR7 435 aaPredicted RBP15.89■□□□□ 0.13
SCARB2-227ENST00000640957 RCOR1Q9UKL0 485 aa15.89■□□□□ 0.13
SCARB2-227ENST00000640957 SBNO1A3KN83 1393 aa15.89■□□□□ 0.13
SCARB2-227ENST00000640957 RIMS1Q86UR5 1692 aaKnown RBP15.89■□□□□ 0.13
SCARB2-227ENST00000640957 ANKLE2Q86XL3 938 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms