RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 PALLDQ8WX93 1383 aa16.4■□□□□ 0.22
SPIN3-239ENST00000640463 ZNF75DP51815 510 aa16.4■□□□□ 0.22
SPIN3-239ENST00000640463 RAB11FIP4Q86YS3 637 aa16.4■□□□□ 0.22
SPIN3-239ENST00000640463 MAP7D2Q96T17 732 aa16.4■□□□□ 0.22
SPIN3-239ENST00000640463 ZMYND15Q9H091 742 aa16.4■□□□□ 0.22
SPIN3-239ENST00000640463 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
SPIN3-239ENST00000640463 HMGN5P82970 282 aaKnown RBP16.39■□□□□ 0.21
SPIN3-239ENST00000640463 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
SPIN3-239ENST00000640463 C11orf57Q6ZUT1 292 aaPredicted RBP16.39■□□□□ 0.21
SPIN3-239ENST00000640463 ZNF710Q8N1W2 664 aa16.39■□□□□ 0.21
SPIN3-239ENST00000640463 DSCC1Q9BVC3 393 aa16.39■□□□□ 0.21
SPIN3-239ENST00000640463 RNF113AO15541 343 aaKnown RBP16.39■□□□□ 0.21
SPIN3-239ENST00000640463 ADORA1P30542 326 aa16.39■□□□□ 0.21
SPIN3-239ENST00000640463 OSBP2Q969R2 916 aa16.39■□□□□ 0.21
SPIN3-239ENST00000640463 TPM3P06753 285 aa16.39■□□□□ 0.21
SPIN3-239ENST00000640463 PDIA3P30101 505 aaKnown RBP16.39■□□□□ 0.21
SPIN3-239ENST00000640463 TDRD7Q8NHU6 1098 aaKnown RBP16.39■□□□□ 0.21
SPIN3-239ENST00000640463 LLPHQ9BRT6 129 aaKnown RBP16.39■□□□□ 0.21
SPIN3-239ENST00000640463 GLI3P10071 1580 aa16.38■□□□□ 0.21
SPIN3-239ENST00000640463 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
SPIN3-239ENST00000640463 PLA2G4DQ86XP0 818 aa16.38■□□□□ 0.21
SPIN3-239ENST00000640463 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
SPIN3-239ENST00000640463 RCOR1Q9UKL0 485 aa16.37■□□□□ 0.21
SPIN3-239ENST00000640463 TAOK2Q9UL54 1235 aa16.37■□□□□ 0.21
SPIN3-239ENST00000640463 KIF3AQ9Y496 699 aa16.37■□□□□ 0.21
SPIN3-239ENST00000640463 RIOK3O14730 519 aaKnown RBP16.37■□□□□ 0.21
SPIN3-239ENST00000640463 CCDC144BQ3MJ40 725 aa16.37■□□□□ 0.21
SPIN3-239ENST00000640463 NAA16Q6N069 864 aaPredicted RBP16.37■□□□□ 0.21
SPIN3-239ENST00000640463 ILDR1Q86SU0 546 aaPredicted RBP16.37■□□□□ 0.21
SPIN3-239ENST00000640463 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
SPIN3-239ENST00000640463 ZCRB1Q8TBF4 217 aaKnown RBP16.37■□□□□ 0.21
SPIN3-239ENST00000640463 ME1P48163 572 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 GORABQ5T7V8 394 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 CLIP2Q9UDT6 1046 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 ADAMTSL3P82987 1691 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 SCARF1Q14162 830 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 PI16Q6UXB8 463 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 GPR108Q9NPR9 543 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 SNW1Q13573 536 aaKnown RBP16.36■□□□□ 0.21
SPIN3-239ENST00000640463 ZSCAN25Q6NSZ9 544 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 CCDC191Q8NCU4 936 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 C16orf45Q96MC5 204 aaPredicted RBP16.36■□□□□ 0.21
SPIN3-239ENST00000640463 AGXT2Q9BYV1 514 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 GJB4Q9NTQ9 266 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 CEP126Q9P2H0 1117 aa16.36■□□□□ 0.21
SPIN3-239ENST00000640463 FDPSP14324 419 aaKnown RBP16.35■□□□□ 0.21
SPIN3-239ENST00000640463 ARID5BQ14865 1188 aa16.35■□□□□ 0.21
SPIN3-239ENST00000640463 BCL2L12Q9HB09 334 aa16.35■□□□□ 0.21
SPIN3-239ENST00000640463 PKD1L3Q7Z443 1732 aa16.35■□□□□ 0.21
SPIN3-239ENST00000640463 TNS3Q68CZ2 1445 aa16.35■□□□□ 0.21
SPIN3-239ENST00000640463 IQCB1Q15051 598 aa16.35■□□□□ 0.21
SPIN3-239ENST00000640463 TTC39AQ5SRH9 613 aa16.35■□□□□ 0.21
SPIN3-239ENST00000640463 CCDC73Q6ZRK6 1079 aa16.35■□□□□ 0.21
SPIN3-239ENST00000640463 FSIP1Q8NA03 581 aa16.35■□□□□ 0.21
SPIN3-239ENST00000640463 CACTINQ8WUQ7 758 aaKnown RBP16.35■□□□□ 0.21
SPIN3-239ENST00000640463 MYH15Q9Y2K3 1946 aa16.35■□□□□ 0.21
SPIN3-239ENST00000640463 LAMB4A4D0S4 1761 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 GOLGA6L19H0YKK7 550 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 GTF2F1P35269 517 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPIN3-239ENST00000640463 CCDC57Q2TAC2 916 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 FAM89AQ96GI7 184 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 XAGE2Q96GT9 111 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 PRDM11Q9NQV5 511 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 TJP1Q07157 1748 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 FOXP2O15409 715 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 CHAF1AQ13111 956 aaPredicted RBP16.34■□□□□ 0.21
SPIN3-239ENST00000640463 BCL11BQ9C0K0 894 aaPredicted RBP16.34■□□□□ 0.21
SPIN3-239ENST00000640463 SPATA31A3Q5VYP0 1347 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 SALL1Q9NSC2 1324 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 CARMIL3Q8ND23 1372 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 POLR3DP05423 398 aaPredicted RBP16.34■□□□□ 0.21
SPIN3-239ENST00000640463 SYNE4Q8N205 404 aa16.34■□□□□ 0.21
SPIN3-239ENST00000640463 PCDH11XQ9BZA7 1347 aa16.33■□□□□ 0.21
SPIN3-239ENST00000640463 PCDH11YQ9BZA8 1340 aa16.33■□□□□ 0.21
SPIN3-239ENST00000640463 KINO60870 393 aaKnown RBP16.33■□□□□ 0.21
SPIN3-239ENST00000640463 ZNF396Q96N95 335 aaPredicted RBP16.33■□□□□ 0.21
SPIN3-239ENST00000640463 A0A1B0GVL5 298 aa16.33■□□□□ 0.2
SPIN3-239ENST00000640463 CCDC158Q5M9N0 1113 aa16.33■□□□□ 0.2
SPIN3-239ENST00000640463 MTERF4Q7Z6M4 381 aaKnown RBP16.33■□□□□ 0.2
SPIN3-239ENST00000640463 ZNF274Q96GC6 653 aaPredicted RBP16.33■□□□□ 0.2
SPIN3-239ENST00000640463 PUS7LQ9H0K6 701 aaKnown RBP16.33■□□□□ 0.2
SPIN3-239ENST00000640463 FGAP02671 866 aa16.32■□□□□ 0.2
SPIN3-239ENST00000640463 ZAP70P43403 619 aa16.32■□□□□ 0.2
SPIN3-239ENST00000640463 STX1AQ16623 288 aa16.32■□□□□ 0.2
SPIN3-239ENST00000640463 PCDHA7Q9UN72 937 aa16.32■□□□□ 0.2
SPIN3-239ENST00000640463 NUP188Q5SRE5 1749 aa16.32■□□□□ 0.2
SPIN3-239ENST00000640463 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
SPIN3-239ENST00000640463 BECN2A8MW95 431 aa16.32■□□□□ 0.2
SPIN3-239ENST00000640463 TAF7LQ5H9L4 462 aa16.32■□□□□ 0.2
SPIN3-239ENST00000640463 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
SPIN3-239ENST00000640463 DENND2AQ9ULE3 1009 aa16.32■□□□□ 0.2
SPIN3-239ENST00000640463 KLF18A0A0U1RQI7 1052 aa16.31■□□□□ 0.2
SPIN3-239ENST00000640463 PRC1O43663 620 aa16.31■□□□□ 0.2
SPIN3-239ENST00000640463 CIAO1O76071 339 aa16.31■□□□□ 0.2
SPIN3-239ENST00000640463 FAM160A1Q05DH4 1040 aa16.31■□□□□ 0.2
SPIN3-239ENST00000640463 CLIC4Q9Y696 253 aa16.31■□□□□ 0.2
SPIN3-239ENST00000640463 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.31■□□□□ 0.2
SPIN3-239ENST00000640463 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
SPIN3-239ENST00000640463 IMMTQ16891 758 aaKnown RBP16.3■□□□□ 0.2
SPIN3-239ENST00000640463 CADPS2Q86UW7 1296 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms