RNA–Protein interactions for RNA: ENST00000640303.1

PRICKLE2-209, Transcript of prickle planar cell polarity protein 2, humanhuman

TSL 5

Gene PRICKLE2, Length 3,704 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE2-209ENST00000640303 MAP7D2Q96T17 732 aa11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 ORC3Q9UBD5 711 aaPredicted RBP11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 RNF113AO15541 343 aaKnown RBP11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 HSP90AA4PQ58FG1 418 aa11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 KIF6Q6ZMV9 814 aa11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 AOPEPQ8N6M6 819 aa11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 V9GYY5 206 aaPredicted RBP11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 MED23Q9ULK4 1368 aa11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 ZNF213O14771 459 aa11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 TPM3P06753 285 aa11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 RFX5P48382 616 aaPredicted RBP11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 ARID5BQ14865 1188 aa11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 NSUN7Q8NE18 718 aaKnown RBP11.73□□□□□ -0.53
PRICKLE2-209ENST00000640303 M0R2C6 588 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 ZAP70P43403 619 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 RESTQ13127 1097 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 C11orf57Q6ZUT1 292 aaPredicted RBP11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 FUCA2Q9BTY2 467 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 COL15A1P39059 1388 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 PRC1O43663 620 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 KIAA1524Q8TCG1 905 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 OSBP2Q969R2 916 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 PRIMPOLQ96LW4 560 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 MAST3O60307 1309 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 LRRFIP1Q32MZ4 808 aaKnown RBP11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 XAGE2Q96GT9 111 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 TMOD3Q9NYL9 352 aa11.72□□□□□ -0.53
PRICKLE2-209ENST00000640303 PDIA4P13667 645 aaKnown RBP11.71□□□□□ -0.53
PRICKLE2-209ENST00000640303 ZNF75DP51815 510 aa11.71□□□□□ -0.53
PRICKLE2-209ENST00000640303 CEP57L1Q8IYX8 460 aa11.71□□□□□ -0.53
PRICKLE2-209ENST00000640303 IL17RAQ96F46 866 aa11.71□□□□□ -0.53
PRICKLE2-209ENST00000640303 UTYO14607 1347 aa11.71□□□□□ -0.53
PRICKLE2-209ENST00000640303 LTN1O94822 1766 aa11.71□□□□□ -0.53
PRICKLE2-209ENST00000640303 TERF1P54274 439 aa11.71□□□□□ -0.53
PRICKLE2-209ENST00000640303 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.53
PRICKLE2-209ENST00000640303 NPHP4O75161 1426 aaPredicted RBP11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 IGSF3O75054 1194 aa11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 PDIA3P30101 505 aaKnown RBP11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 STX1AQ16623 288 aa11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 SLC9C2Q5TAH2 1124 aa11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 KCNB2Q92953 911 aa11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 CHMP4CQ96CF2 233 aa11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 MYL10Q9BUA6 226 aa11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 ELP1O95163 1332 aa11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 KIF13AQ9H1H9 1805 aa11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 NCAPD2Q15021 1401 aa11.71□□□□□ -0.54
PRICKLE2-209ENST00000640303 ATG9AQ7Z3C6 839 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 CTNNA3Q9UI47 895 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 PFKFB2O60825 505 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 FOXO4P98177 505 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 SCARF1Q14162 830 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 CCDC112Q8NEF3 446 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 GOLPH3LQ9H4A5 285 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 HELLSQ9NRZ9 838 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 TMEM94Q12767 1356 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 FGAP02671 866 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 RGPD2P0DJD1 1756 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 SKILP12757 684 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 ZSCAN25Q6NSZ9 544 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 DNAJC10Q8IXB1 793 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 NAT10Q9H0A0 1025 aaKnown RBP11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
PRICKLE2-209ENST00000640303 DHX16O60231 1041 aaKnown RBP11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 PTPN21Q16825 1174 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 CACTINQ8WUQ7 758 aaKnown RBP11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 PHKBQ93100 1093 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 PKNOX2Q96KN3 472 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 ANO10Q9NW15 660 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 IQSEC3Q9UPP2 1182 aaPredicted RBP11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 MTERF4Q7Z6M4 381 aaKnown RBP11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 CADPS2Q86UW7 1296 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 AIFM3Q96NN9 605 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 PUS7LQ9H0K6 701 aaKnown RBP11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 CLIC4Q9Y696 253 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 MEGF6O75095 1541 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 CACNA1FO60840 1977 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 SNAP23O00161 211 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 GPAA1O43292 621 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 TRIM29Q14134 588 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 CCDC144BQ3MJ40 725 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 ZMYM1Q5SVZ6 1142 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 HOMER1Q86YM7 354 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 CREBRFQ8IUR6 639 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 FAM177A1Q8N128 213 aaPredicted RBP11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 MRPS27Q92552 414 aaKnown RBP11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 AKAP2Q9Y2D5 859 aa11.69□□□□□ -0.54
PRICKLE2-209ENST00000640303 CTDNEP1O95476 244 aa11.68□□□□□ -0.54
PRICKLE2-209ENST00000640303 LMOD1P29536 600 aaPredicted RBP11.68□□□□□ -0.54
PRICKLE2-209ENST00000640303 RABL6Q3YEC7 729 aaPredicted RBP11.68□□□□□ -0.54
PRICKLE2-209ENST00000640303 CPLX2Q6PUV4 134 aaKnown RBP11.68□□□□□ -0.54
PRICKLE2-209ENST00000640303 CCDC191Q8NCU4 936 aa11.68□□□□□ -0.54
PRICKLE2-209ENST00000640303 NCOA7Q8NI08 942 aa11.68□□□□□ -0.54
PRICKLE2-209ENST00000640303 ASAP1Q9ULH1 1129 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms