RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 FAM107BQ9H098 131 aa8.31□□□□□ -1.08
NECAP1-213ENST00000638883 CPSF2Q9P2I0 782 aaKnown RBP8.31□□□□□ -1.08
NECAP1-213ENST00000638883 ADGRL3Q9HAR2 1447 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 GNPATO15228 680 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 UBE2HP62256 183 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 LUZP1Q86V48 1076 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 PAIP2Q9BPZ3 127 aaKnown RBP8.3□□□□□ -1.08
NECAP1-213ENST00000638883 NRBP1Q9UHY1 535 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 EIF3JO75822 258 aaKnown RBP8.3□□□□□ -1.08
NECAP1-213ENST00000638883 MAP3K11Q16584 847 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 TMX3Q96JJ7 454 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 GGNBP2Q9H3C7 697 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 FOCADQ5VW36 1801 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 TNRQ92752 1358 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 KCPQ6ZWJ8 1503 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 DDX11Q96FC9 970 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 CNPY2Q9Y2B0 182 aa8.3□□□□□ -1.08
NECAP1-213ENST00000638883 CKAP2LQ8IYA6 745 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 FAM177A1Q8N128 213 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-213ENST00000638883 ADAM21Q9UKJ8 722 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 UBR3Q6ZT12 1888 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 GALR2O43603 387 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-213ENST00000638883 NEMFO60524 1076 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 ERLIN2O94905 339 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 SEC31AO94979 1220 aaKnown RBP8.29□□□□□ -1.08
NECAP1-213ENST00000638883 CYP2E1P05181 493 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-213ENST00000638883 SGSM3Q96HU1 749 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 NUP62CLQ9H1M0 184 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 TNMDQ9H2S6 317 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 CENPHQ9H3R5 247 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 RAD50Q92878 1312 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 AFDNP55196 1824 aaKnown RBP8.29□□□□□ -1.08
NECAP1-213ENST00000638883 U2AF1L5P0DN76 240 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-213ENST00000638883 U2AF1Q01081 240 aaKnown RBP eCLIP8.29□□□□□ -1.08
NECAP1-213ENST00000638883 AP1ARQ63HQ0 302 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 CHRDL2Q6WN34 429 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 EXOC4Q96A65 974 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 SYTL4Q96C24 671 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-213ENST00000638883 GCC1Q96CN9 775 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 PLEKHF1Q96S99 279 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 CDHR5Q9HBB8 845 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 ZDHHC9Q9Y397 364 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 DDX60LQ5H9U9 1706 aaKnown RBP8.29□□□□□ -1.08
NECAP1-213ENST00000638883 PAPPA2Q9BXP8 1791 aa8.29□□□□□ -1.08
NECAP1-213ENST00000638883 MYH3P11055 1940 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 CD44P16070 742 aaKnown RBP8.28□□□□□ -1.08
NECAP1-213ENST00000638883 PLA2G4AP47712 749 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 ATF7IPQ6VMQ6 1270 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 GIGYF2Q6Y7W6 1299 aaKnown RBP8.28□□□□□ -1.08
NECAP1-213ENST00000638883 PLPP6Q8IY26 295 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 TERF2IPQ9NYB0 399 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 TRIM35Q9UPQ4 493 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 USP6P35125 1406 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 VPS37CA5D8V6 355 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-213ENST00000638883 UBAP1LF5GYI3 381 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 DHX8Q14562 1220 aaKnown RBP8.28□□□□□ -1.08
NECAP1-213ENST00000638883 FMNL3Q8IVF7 1028 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 TMEM57Q8N5G2 664 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 ZRANB1Q9UGI0 708 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 AATKQ6ZMQ8 1374 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 PLEKHG2Q9H7P9 1386 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 NUTM2FA1L443 756 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 SH3D19Q5HYK7 790 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 CFAP53Q96M91 514 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 CEP89Q96ST8 783 aa8.28□□□□□ -1.08
NECAP1-213ENST00000638883 MKRN1Q9UHC7 482 aaKnown RBP8.28□□□□□ -1.08
NECAP1-213ENST00000638883 PHACTR2O75167 634 aa8.27□□□□□ -1.08
NECAP1-213ENST00000638883 LIG3P49916 1009 aa8.27□□□□□ -1.08
NECAP1-213ENST00000638883 TRDNQ13061 729 aa8.27□□□□□ -1.08
NECAP1-213ENST00000638883 EFCAB13Q8IY85 973 aa8.27□□□□□ -1.08
NECAP1-213ENST00000638883 CCDC82Q8N4S0 544 aa8.27□□□□□ -1.08
NECAP1-213ENST00000638883 JPH2Q9BR39 696 aaPredicted RBP8.27□□□□□ -1.08
NECAP1-213ENST00000638883 DNAI1Q9UI46 699 aa8.27□□□□□ -1.08
NECAP1-213ENST00000638883 NOB1Q9ULX3 412 aaKnown RBP8.27□□□□□ -1.08
NECAP1-213ENST00000638883 SMC3Q9UQE7 1217 aa8.27□□□□□ -1.08
NECAP1-213ENST00000638883 EXOC6BQ9Y2D4 811 aa8.27□□□□□ -1.08
NECAP1-213ENST00000638883 FHOD1Q9Y613 1164 aa8.27□□□□□ -1.08
NECAP1-213ENST00000638883 KDRP35968 1356 aa8.27□□□□□ -1.09
NECAP1-213ENST00000638883 BRD1O95696 1058 aa8.27□□□□□ -1.09
NECAP1-213ENST00000638883 TRIM27P14373 513 aa8.27□□□□□ -1.09
NECAP1-213ENST00000638883 CEBPAP49715 358 aaPredicted RBP8.27□□□□□ -1.09
NECAP1-213ENST00000638883 ZNF165P49910 485 aa8.27□□□□□ -1.09
NECAP1-213ENST00000638883 TTC19Q6DKK2 380 aaPredicted RBP8.27□□□□□ -1.09
NECAP1-213ENST00000638883 CACTINQ8WUQ7 758 aaKnown RBP8.27□□□□□ -1.09
NECAP1-213ENST00000638883 ATN1P54259 1190 aaPredicted RBP8.27□□□□□ -1.09
NECAP1-213ENST00000638883 VEZTQ9HBM0 779 aa8.27□□□□□ -1.09
NECAP1-213ENST00000638883 PSME4Q14997 1843 aa8.27□□□□□ -1.09
NECAP1-213ENST00000638883 FYB1O15117 783 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 EXOSC9Q06265 439 aaKnown RBP8.26□□□□□ -1.09
NECAP1-213ENST00000638883 ANO6Q4KMQ2 910 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 ERC1Q8IUD2 1116 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 WDR63Q8IWG1 891 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 BICD2Q8TD16 824 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 ANO2Q9NQ90 1003 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 IRAK4Q9NWZ3 460 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 SH3BP1Q9Y3L3 701 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 CCDC69A6NI79 296 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 KIAA0754O94854 1291 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 TADA2BQ86TJ2 420 aa8.26□□□□□ -1.09
NECAP1-213ENST00000638883 PIK3R5Q8WYR1 880 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms