RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 RAB11FIP4Q86YS3 637 aa9.42□□□□□ -0.9
GABRB3-225ENST00000638099 SH3TC1Q8TE82 1336 aa9.42□□□□□ -0.9
GABRB3-225ENST00000638099 RNF113AO15541 343 aaKnown RBP9.42□□□□□ -0.9
GABRB3-225ENST00000638099 IDH1O75874 414 aaKnown RBP9.42□□□□□ -0.9
GABRB3-225ENST00000638099 HSPD1P10809 573 aaKnown RBP9.42□□□□□ -0.9
GABRB3-225ENST00000638099 RPS6KB1P23443 525 aa9.42□□□□□ -0.9
GABRB3-225ENST00000638099 RNF20Q5VTR2 975 aa9.42□□□□□ -0.9
GABRB3-225ENST00000638099 BARGINQ6ZT62 677 aa9.42□□□□□ -0.9
GABRB3-225ENST00000638099 INTS4Q96HW7 963 aaKnown RBP9.42□□□□□ -0.9
GABRB3-225ENST00000638099 UTP14AQ9BVJ6 771 aaKnown RBP9.42□□□□□ -0.9
GABRB3-225ENST00000638099 GPR108Q9NPR9 543 aa9.42□□□□□ -0.9
GABRB3-225ENST00000638099 GPHNQ9NQX3 736 aaPredicted RBP9.42□□□□□ -0.9
GABRB3-225ENST00000638099 COL4A1P02462 1669 aa9.42□□□□□ -0.9
GABRB3-225ENST00000638099 CDHR2Q9BYE9 1310 aa9.42□□□□□ -0.9
GABRB3-225ENST00000638099 MYH3P11055 1940 aa9.42□□□□□ -0.9
GABRB3-225ENST00000638099 ERVV-1B6SEH8 477 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 ZBTB22O15209 634 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 EPB41L2O43491 1005 aaKnown RBP9.41□□□□□ -0.9
GABRB3-225ENST00000638099 HSP90B1P14625 803 aaKnown RBP9.41□□□□□ -0.9
GABRB3-225ENST00000638099 ZMYM1Q5SVZ6 1142 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 MEX3CQ5U5Q3 659 aaKnown RBP9.41□□□□□ -0.9
GABRB3-225ENST00000638099 Q6ZUG5 572 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 CNKSR2Q8WXI2 1034 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 KCNB2Q92953 911 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 NEK1Q96PY6 1258 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 DENND2AQ9ULE3 1009 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 CNPY2Q9Y2B0 182 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 AKAP2Q9Y2D5 859 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 JAK2O60674 1132 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 PHF14O94880 888 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 PDE8BO95263 885 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 PDIA4P13667 645 aaKnown RBP9.41□□□□□ -0.9
GABRB3-225ENST00000638099 FGD1P98174 961 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 ERFEQ4G0M1 354 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 STK11IPQ8N1F8 1099 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 DDX11Q96FC9 970 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 MPHOSPH8Q99549 860 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 PIH1D3Q9NQM4 214 aaKnown RBP9.41□□□□□ -0.9
GABRB3-225ENST00000638099 ANKRD36CQ5JPF3 1778 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 CCDC102BQ68D86 513 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 VGLL2Q8N8G2 317 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 BRF1Q92994 677 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 TM6SF1Q9BZW5 370 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 SPEF2Q9C093 1822 aa9.41□□□□□ -0.9
GABRB3-225ENST00000638099 FOXP2O15409 715 aa9.4□□□□□ -0.9
GABRB3-225ENST00000638099 FIBPO43427 364 aa9.4□□□□□ -0.9
GABRB3-225ENST00000638099 STX6O43752 255 aa9.4□□□□□ -0.9
GABRB3-225ENST00000638099 NTSR2O95665 410 aa9.4□□□□□ -0.9
GABRB3-225ENST00000638099 CLEC17AQ6ZS10 378 aa9.4□□□□□ -0.9
GABRB3-225ENST00000638099 NKX2-3Q8TAU0 364 aa9.4□□□□□ -0.9
GABRB3-225ENST00000638099 WWC3Q9ULE0 1092 aa9.4□□□□□ -0.9
GABRB3-225ENST00000638099 GNPATO15228 680 aa9.4□□□□□ -0.91
GABRB3-225ENST00000638099 PSMA5P28066 241 aa9.4□□□□□ -0.91
GABRB3-225ENST00000638099 GTF2E1P29083 439 aaPredicted RBP9.4□□□□□ -0.91
GABRB3-225ENST00000638099 BCAMP50895 628 aa9.4□□□□□ -0.91
GABRB3-225ENST00000638099 CCT2P78371 535 aaKnown RBP9.4□□□□□ -0.91
GABRB3-225ENST00000638099 APOBRQ0VD83 1088 aa9.4□□□□□ -0.91
GABRB3-225ENST00000638099 VPS72Q15906 364 aa9.4□□□□□ -0.91
GABRB3-225ENST00000638099 SLC9C2Q5TAH2 1124 aa9.4□□□□□ -0.91
GABRB3-225ENST00000638099 USPL1Q5W0Q7 1092 aa9.4□□□□□ -0.91
GABRB3-225ENST00000638099 TBC1D9BQ66K14 1250 aa9.4□□□□□ -0.91
GABRB3-225ENST00000638099 NCOA5Q9HCD5 579 aaKnown RBP9.4□□□□□ -0.91
GABRB3-225ENST00000638099 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.4□□□□□ -0.91
GABRB3-225ENST00000638099 FSD2A1L4K1 749 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 HSPA1LP34931 641 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 KLHL40Q2TBA0 621 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 USP48Q86UV5 1035 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 INCENPQ9NQS7 918 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 TMEM63CQ9P1W3 806 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 U3KPZ7 1027 aaPredicted RBP9.39□□□□□ -0.91
GABRB3-225ENST00000638099 E7EWF7 191 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 KDM4AO75164 1064 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 CDC37L1Q7L3B6 337 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 GRPEL1Q9HAV7 217 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 HELLSQ9NRZ9 838 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 JCADQ9P266 1359 aa9.39□□□□□ -0.91
GABRB3-225ENST00000638099 GPAA1O43292 621 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 APPP05067 770 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 ZSCAN22P10073 491 aaPredicted RBP9.38□□□□□ -0.91
GABRB3-225ENST00000638099 DNM1Q05193 864 aaKnown RBP9.38□□□□□ -0.91
GABRB3-225ENST00000638099 SKOR2Q2VWA4 1001 aaPredicted RBP9.38□□□□□ -0.91
GABRB3-225ENST00000638099 ZSCAN23Q3MJ62 389 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 WDR33Q9C0J8 1336 aaKnown RBP9.38□□□□□ -0.91
GABRB3-225ENST00000638099 AKAP11Q9UKA4 1901 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 SYCE3A1L190 88 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 FGAP02671 866 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 RASGRF1Q13972 1273 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 LARP1BQ659C4 914 aaKnown RBP9.38□□□□□ -0.91
GABRB3-225ENST00000638099 SMARCC1Q92922 1105 aaPredicted RBP9.38□□□□□ -0.91
GABRB3-225ENST00000638099 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 HMG20BQ9P0W2 317 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 MTMR6Q9Y217 621 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 JAG2Q9Y219 1238 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 LAMA4Q16363 1823 aa9.38□□□□□ -0.91
GABRB3-225ENST00000638099 F13A1P00488 732 aa9.37□□□□□ -0.91
GABRB3-225ENST00000638099 CHRNDQ07001 517 aa9.37□□□□□ -0.91
GABRB3-225ENST00000638099 ZNF532Q9HCE3 1301 aa9.37□□□□□ -0.91
GABRB3-225ENST00000638099 CCNL1Q9UK58 526 aaPredicted RBP9.37□□□□□ -0.91
GABRB3-225ENST00000638099 NWD2Q9ULI1 1742 aa9.37□□□□□ -0.91
GABRB3-225ENST00000638099 GYG1P46976 350 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms