RNA–Protein interactions for RNA: ENST00000637842.1

RBMS3-220, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 1,458 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-220ENST00000637842 OGFOD1Q8N543 542 aa12.18□□□□□ -0.46
RBMS3-220ENST00000637842 PHACTR3Q96KR7 559 aa12.18□□□□□ -0.46
RBMS3-220ENST00000637842 STAP2Q9UGK3 403 aa12.18□□□□□ -0.46
RBMS3-220ENST00000637842 TRMT112Q9UI30 125 aaKnown RBP12.18□□□□□ -0.46
RBMS3-220ENST00000637842 UNC80Q8N2C7 3258 aa12.18□□□□□ -0.46
RBMS3-220ENST00000637842 EVI5O60447 810 aa12.17□□□□□ -0.46
RBMS3-220ENST00000637842 MAP3K11Q16584 847 aa12.17□□□□□ -0.46
RBMS3-220ENST00000637842 HSP90AB3PQ58FF7 597 aa12.17□□□□□ -0.46
RBMS3-220ENST00000637842 Q7L0L9 218 aa12.17□□□□□ -0.46
RBMS3-220ENST00000637842 UBE2Q1Q7Z7E8 422 aa12.17□□□□□ -0.46
RBMS3-220ENST00000637842 CELF1Q92879 486 aaKnown RBP12.17□□□□□ -0.46
RBMS3-220ENST00000637842 SHISA4Q96DD7 197 aa12.17□□□□□ -0.46
RBMS3-220ENST00000637842 ERBB4Q15303 1308 aa12.17□□□□□ -0.46
RBMS3-220ENST00000637842 SH3TC1Q8TE82 1336 aa12.17□□□□□ -0.46
RBMS3-220ENST00000637842 TESPA1A2RU30 521 aaPredicted RBP12.16□□□□□ -0.46
RBMS3-220ENST00000637842 USP17L3A6NCW0 530 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 USP17L4A6NCW7 530 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 WNT10BO00744 389 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 PPP1R12BO60237 982 aaPredicted RBP12.16□□□□□ -0.46
RBMS3-220ENST00000637842 GNRH1P01148 92 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 GJA8P48165 433 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 PRMT2P55345 433 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 NBR1Q14596 966 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 KIF22Q14807 665 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 USP17L1Q7RTZ2 530 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 NLRP10Q86W26 655 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 APOBEC3FQ8IUX4 373 aaKnown RBP12.16□□□□□ -0.46
RBMS3-220ENST00000637842 PTPN18Q99952 460 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 ZFYVE28Q9HCC9 887 aa12.16□□□□□ -0.46
RBMS3-220ENST00000637842 HTATSF1O43719 755 aaKnown RBP12.15□□□□□ -0.46
RBMS3-220ENST00000637842 COL9A1P20849 921 aa12.15□□□□□ -0.46
RBMS3-220ENST00000637842 BMP8BP34820 402 aa12.15□□□□□ -0.46
RBMS3-220ENST00000637842 MMP14P50281 582 aa12.15□□□□□ -0.46
RBMS3-220ENST00000637842 PODNQ7Z5L7 613 aa12.15□□□□□ -0.46
RBMS3-220ENST00000637842 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
RBMS3-220ENST00000637842 GJB1P08034 283 aa12.14□□□□□ -0.47
RBMS3-220ENST00000637842 PRKAR2BP31323 418 aa12.14□□□□□ -0.47
RBMS3-220ENST00000637842 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
RBMS3-220ENST00000637842 MTFR1Q15390 333 aa12.14□□□□□ -0.47
RBMS3-220ENST00000637842 SF3B3Q15393 1217 aaKnown RBP12.14□□□□□ -0.47
RBMS3-220ENST00000637842 LRIT3Q3SXY7 679 aa12.14□□□□□ -0.47
RBMS3-220ENST00000637842 PNISRQ8TF01 805 aaKnown RBP12.14□□□□□ -0.47
RBMS3-220ENST00000637842 CLMNQ96JQ2 1002 aa12.14□□□□□ -0.47
RBMS3-220ENST00000637842 MIS18AQ9NYP9 233 aa12.14□□□□□ -0.47
RBMS3-220ENST00000637842 ANKIB1Q9P2G1 1089 aa12.14□□□□□ -0.47
RBMS3-220ENST00000637842 WDHD1O75717 1129 aaPredicted RBP12.14□□□□□ -0.47
RBMS3-220ENST00000637842 UFL1O94874 794 aa12.14□□□□□ -0.47
RBMS3-220ENST00000637842 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
RBMS3-220ENST00000637842 ANKRD36CQ5JPF3 1778 aa12.13□□□□□ -0.47
RBMS3-220ENST00000637842 DCTN1Q14203 1278 aa12.13□□□□□ -0.47
RBMS3-220ENST00000637842 TAF1CQ15572 869 aaPredicted RBP12.13□□□□□ -0.47
RBMS3-220ENST00000637842 FZD1Q9UP38 647 aa12.13□□□□□ -0.47
RBMS3-220ENST00000637842 LRRC37AA6NMS7 1700 aa12.12□□□□□ -0.47
RBMS3-220ENST00000637842 DDX60Q8IY21 1712 aaKnown RBP12.12□□□□□ -0.47
RBMS3-220ENST00000637842 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
RBMS3-220ENST00000637842 CDK11BP21127 795 aaKnown RBP12.12□□□□□ -0.47
RBMS3-220ENST00000637842 GDF15Q99988 308 aa12.12□□□□□ -0.47
RBMS3-220ENST00000637842 DEFB129Q9H1M3 183 aa12.12□□□□□ -0.47
RBMS3-220ENST00000637842 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
RBMS3-220ENST00000637842 MYO3BQ8WXR4 1341 aa12.11□□□□□ -0.47
RBMS3-220ENST00000637842 SASH1O94885 1247 aa12.11□□□□□ -0.47
RBMS3-220ENST00000637842 CAPN2P17655 700 aa12.11□□□□□ -0.47
RBMS3-220ENST00000637842 IREB2P48200 963 aaKnown RBP12.11□□□□□ -0.47
RBMS3-220ENST00000637842 EIF4A1P60842 406 aaKnown RBP12.11□□□□□ -0.47
RBMS3-220ENST00000637842 SUPT20HL1Q3ZLR7 823 aa12.11□□□□□ -0.47
RBMS3-220ENST00000637842 RNF208Q9H0X6 261 aa12.11□□□□□ -0.47
RBMS3-220ENST00000637842 VCANP13611 3396 aa12.11□□□□□ -0.47
RBMS3-220ENST00000637842 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
RBMS3-220ENST00000637842 CCL5P13501 91 aa12.1□□□□□ -0.47
RBMS3-220ENST00000637842 GJA5P36382 358 aa12.1□□□□□ -0.47
RBMS3-220ENST00000637842 LACTBP83111 547 aaPredicted RBP12.1□□□□□ -0.47
RBMS3-220ENST00000637842 ANKRD13AQ8IZ07 590 aa12.1□□□□□ -0.47
RBMS3-220ENST00000637842 THUMPD2Q9BTF0 503 aaKnown RBP12.1□□□□□ -0.47
RBMS3-220ENST00000637842 RSPH6AQ9H0K4 717 aa12.1□□□□□ -0.47
RBMS3-220ENST00000637842 PPP2R3BQ9Y5P8 575 aa12.1□□□□□ -0.47
RBMS3-220ENST00000637842 HOXD10P28358 340 aa12.09□□□□□ -0.47
RBMS3-220ENST00000637842 GRK4P32298 578 aa12.09□□□□□ -0.47
RBMS3-220ENST00000637842 BCAMP50895 628 aa12.09□□□□□ -0.47
RBMS3-220ENST00000637842 UBXN2AP68543 259 aa12.09□□□□□ -0.47
RBMS3-220ENST00000637842 U2AF1L4Q8WU68 220 aaKnown RBP12.09□□□□□ -0.47
RBMS3-220ENST00000637842 SYMPKQ92797 1274 aaKnown RBP12.09□□□□□ -0.47
RBMS3-220ENST00000637842 MS4A4AQ96JQ5 239 aa12.09□□□□□ -0.47
RBMS3-220ENST00000637842 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
RBMS3-220ENST00000637842 ARHGAP39Q9C0H5 1083 aa12.09□□□□□ -0.47
RBMS3-220ENST00000637842 TAF1P21675 1872 aa12.09□□□□□ -0.47
RBMS3-220ENST00000637842 TLR2O60603 784 aa12.08□□□□□ -0.47
RBMS3-220ENST00000637842 PLA2G5P39877 138 aa12.08□□□□□ -0.47
RBMS3-220ENST00000637842 DACT2Q5SW24 774 aa12.08□□□□□ -0.47
RBMS3-220ENST00000637842 STRIP1Q5VSL9 837 aa12.08□□□□□ -0.47
RBMS3-220ENST00000637842 LRP10Q7Z4F1 713 aa12.08□□□□□ -0.47
RBMS3-220ENST00000637842 RAET1EQ8TD07 263 aa12.08□□□□□ -0.47
RBMS3-220ENST00000637842 FAM122AQ96E09 287 aa12.08□□□□□ -0.47
RBMS3-220ENST00000637842 BIN2Q9UBW5 565 aaPredicted RBP12.08□□□□□ -0.47
RBMS3-220ENST00000637842 COL1A1P02452 1464 aaPredicted RBP12.08□□□□□ -0.48
RBMS3-220ENST00000637842 LAMB2P55268 1798 aa12.08□□□□□ -0.48
RBMS3-220ENST00000637842 USP2O75604 605 aaPredicted RBP12.08□□□□□ -0.48
RBMS3-220ENST00000637842 SGPL1O95470 568 aa12.08□□□□□ -0.48
RBMS3-220ENST00000637842 GTF2A2P52657 109 aa12.08□□□□□ -0.48
RBMS3-220ENST00000637842 PDIA6Q15084 440 aa12.08□□□□□ -0.48
RBMS3-220ENST00000637842 TDHQ8IZJ6 230 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms