RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 NAP1L2Q9ULW6 460 aaPredicted RBP18.3■□□□□ 0.52
SCN8A-214ENST00000637709 JCADQ9P266 1359 aa18.3■□□□□ 0.52
SCN8A-214ENST00000637709 PSMA5P28066 241 aa18.29■□□□□ 0.52
SCN8A-214ENST00000637709 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
SCN8A-214ENST00000637709 CNPY2Q9Y2B0 182 aa18.29■□□□□ 0.52
SCN8A-214ENST00000637709 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
SCN8A-214ENST00000637709 AKAP11Q9UKA4 1901 aa18.29■□□□□ 0.52
SCN8A-214ENST00000637709 STX6O43752 255 aa18.29■□□□□ 0.52
SCN8A-214ENST00000637709 IDH1O75874 414 aaKnown RBP18.29■□□□□ 0.52
SCN8A-214ENST00000637709 PDE8BO95263 885 aa18.29■□□□□ 0.52
SCN8A-214ENST00000637709 HSP90B1P14625 803 aaKnown RBP18.29■□□□□ 0.52
SCN8A-214ENST00000637709 KLHL40Q2TBA0 621 aa18.29■□□□□ 0.52
SCN8A-214ENST00000637709 USPL1Q5W0Q7 1092 aa18.29■□□□□ 0.52
SCN8A-214ENST00000637709 FAM173BQ6P4H8 233 aa18.29■□□□□ 0.52
SCN8A-214ENST00000637709 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.28■□□□□ 0.52
SCN8A-214ENST00000637709 FGD1P98174 961 aa18.28■□□□□ 0.52
SCN8A-214ENST00000637709 SKOR2Q2VWA4 1001 aaPredicted RBP18.28■□□□□ 0.52
SCN8A-214ENST00000637709 BRF1Q92994 677 aa18.28■□□□□ 0.52
SCN8A-214ENST00000637709 MPHOSPH8Q99549 860 aa18.28■□□□□ 0.52
SCN8A-214ENST00000637709 GPHNQ9NQX3 736 aaPredicted RBP18.28■□□□□ 0.52
SCN8A-214ENST00000637709 FOXP2O15409 715 aa18.27■□□□□ 0.52
SCN8A-214ENST00000637709 JAK2O60674 1132 aa18.27■□□□□ 0.52
SCN8A-214ENST00000637709 CCDC102BQ68D86 513 aa18.27■□□□□ 0.52
SCN8A-214ENST00000637709 PIH1D3Q9NQM4 214 aaKnown RBP18.27■□□□□ 0.52
SCN8A-214ENST00000637709 NTSR2O95665 410 aa18.27■□□□□ 0.51
SCN8A-214ENST00000637709 ERFEQ4G0M1 354 aa18.27■□□□□ 0.51
SCN8A-214ENST00000637709 RAB11FIP4Q86YS3 637 aa18.27■□□□□ 0.51
SCN8A-214ENST00000637709 DDX11Q96FC9 970 aa18.27■□□□□ 0.51
SCN8A-214ENST00000637709 U3KPZ7 1027 aaPredicted RBP18.27■□□□□ 0.51
SCN8A-214ENST00000637709 SLC51AQ86UW1 340 aa18.26■□□□□ 0.51
SCN8A-214ENST00000637709 GRPEL1Q9HAV7 217 aa18.26■□□□□ 0.51
SCN8A-214ENST00000637709 HELLSQ9NRZ9 838 aa18.26■□□□□ 0.51
SCN8A-214ENST00000637709 TMEM63CQ9P1W3 806 aa18.26■□□□□ 0.51
SCN8A-214ENST00000637709 TAOK2Q9UL54 1235 aa18.26■□□□□ 0.51
SCN8A-214ENST00000637709 DENND2AQ9ULE3 1009 aa18.26■□□□□ 0.51
SCN8A-214ENST00000637709 WDR33Q9C0J8 1336 aaKnown RBP18.26■□□□□ 0.51
SCN8A-214ENST00000637709 DDX60Q8IY21 1712 aaKnown RBP18.26■□□□□ 0.51
SCN8A-214ENST00000637709 FIBPO43427 364 aa18.26■□□□□ 0.51
SCN8A-214ENST00000637709 ZSCAN22P10073 491 aaPredicted RBP18.26■□□□□ 0.51
SCN8A-214ENST00000637709 VPS72Q15906 364 aa18.26■□□□□ 0.51
SCN8A-214ENST00000637709 USP48Q86UV5 1035 aa18.26■□□□□ 0.51
SCN8A-214ENST00000637709 PHF14O94880 888 aa18.25■□□□□ 0.51
SCN8A-214ENST00000637709 ZSCAN23Q3MJ62 389 aa18.25■□□□□ 0.51
SCN8A-214ENST00000637709 SLC9C2Q5TAH2 1124 aa18.25■□□□□ 0.51
SCN8A-214ENST00000637709 HMG20BQ9P0W2 317 aa18.25■□□□□ 0.51
SCN8A-214ENST00000637709 APOBRQ0VD83 1088 aa18.25■□□□□ 0.51
SCN8A-214ENST00000637709 MEX3CQ5U5Q3 659 aaKnown RBP18.25■□□□□ 0.51
SCN8A-214ENST00000637709 CDC37L1Q7L3B6 337 aa18.25■□□□□ 0.51
SCN8A-214ENST00000637709 WWC3Q9ULE0 1092 aa18.25■□□□□ 0.51
SCN8A-214ENST00000637709 E7EWF7 191 aa18.24■□□□□ 0.51
SCN8A-214ENST00000637709 BCAMP50895 628 aa18.24■□□□□ 0.51
SCN8A-214ENST00000637709 CCT2P78371 535 aaKnown RBP18.24■□□□□ 0.51
SCN8A-214ENST00000637709 TBC1D9BQ66K14 1250 aa18.24■□□□□ 0.51
SCN8A-214ENST00000637709 NKX2-3Q8TAU0 364 aa18.24■□□□□ 0.51
SCN8A-214ENST00000637709 NCOA5Q9HCD5 579 aaKnown RBP18.24■□□□□ 0.51
SCN8A-214ENST00000637709 MYH7P12883 1935 aa18.24■□□□□ 0.51
SCN8A-214ENST00000637709 GNPATO15228 680 aa18.24■□□□□ 0.51
SCN8A-214ENST00000637709 DNM1Q05193 864 aaKnown RBP18.24■□□□□ 0.51
SCN8A-214ENST00000637709 STK11IPQ8N1F8 1099 aa18.24■□□□□ 0.51
SCN8A-214ENST00000637709 SYCE3A1L190 88 aa18.23■□□□□ 0.51
SCN8A-214ENST00000637709 GPAA1O43292 621 aa18.23■□□□□ 0.51
SCN8A-214ENST00000637709 L1TD1Q5T7N2 865 aaKnown RBP18.23■□□□□ 0.51
SCN8A-214ENST00000637709 SH2B1Q9NRF2 756 aaPredicted RBP18.23■□□□□ 0.51
SCN8A-214ENST00000637709 MTMR6Q9Y217 621 aa18.23■□□□□ 0.51
SCN8A-214ENST00000637709 F13A1P00488 732 aa18.23■□□□□ 0.51
SCN8A-214ENST00000637709 FGAP02671 866 aa18.23■□□□□ 0.51
SCN8A-214ENST00000637709 GTF2E1P29083 439 aaPredicted RBP18.23■□□□□ 0.51
SCN8A-214ENST00000637709 LARP1BQ659C4 914 aaKnown RBP18.23■□□□□ 0.51
SCN8A-214ENST00000637709 ZSCAN31Q96LW9 406 aaPredicted RBP18.23■□□□□ 0.51
SCN8A-214ENST00000637709 RFX7Q2KHR2 1363 aa18.22■□□□□ 0.51
SCN8A-214ENST00000637709 COL5A3P25940 1745 aaPredicted RBP18.22■□□□□ 0.51
SCN8A-214ENST00000637709 PUM3Q15397 648 aaKnown RBP18.22■□□□□ 0.51
SCN8A-214ENST00000637709 SMARCC1Q92922 1105 aaPredicted RBP18.22■□□□□ 0.51
SCN8A-214ENST00000637709 INCENPQ9NQS7 918 aa18.22■□□□□ 0.51
SCN8A-214ENST00000637709 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
SCN8A-214ENST00000637709 APPP05067 770 aa18.22■□□□□ 0.51
SCN8A-214ENST00000637709 RASGRF1Q13972 1273 aa18.22■□□□□ 0.51
SCN8A-214ENST00000637709 TSGA10IPQ3SY00 556 aa18.22■□□□□ 0.51
SCN8A-214ENST00000637709 DSCC1Q9BVC3 393 aa18.21■□□□□ 0.51
SCN8A-214ENST00000637709 ZNF532Q9HCE3 1301 aa18.21■□□□□ 0.51
SCN8A-214ENST00000637709 BTAF1O14981 1849 aa18.21■□□□□ 0.51
SCN8A-214ENST00000637709 CHRNDQ07001 517 aa18.21■□□□□ 0.5
SCN8A-214ENST00000637709 SCRN1Q12765 414 aa18.21■□□□□ 0.5
SCN8A-214ENST00000637709 KRT32Q14532 448 aa18.21■□□□□ 0.5
SCN8A-214ENST00000637709 CCDC152Q4G0S7 254 aa18.21■□□□□ 0.5
SCN8A-214ENST00000637709 BCL2L12Q9HB09 334 aa18.21■□□□□ 0.5
SCN8A-214ENST00000637709 HSPA1LP34931 641 aa18.2■□□□□ 0.5
SCN8A-214ENST00000637709 FNBP4Q8N3X1 1017 aaPredicted RBP18.2■□□□□ 0.5
SCN8A-214ENST00000637709 LPIN2Q92539 896 aa18.2■□□□□ 0.5
SCN8A-214ENST00000637709 CCNL1Q9UK58 526 aaPredicted RBP18.2■□□□□ 0.5
SCN8A-214ENST00000637709 PTMSP20962 102 aa18.2■□□□□ 0.5
SCN8A-214ENST00000637709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCN8A-214ENST00000637709 APPBP2Q92624 585 aa18.2■□□□□ 0.5
SCN8A-214ENST00000637709 FGFR2P21802 821 aa18.19■□□□□ 0.5
SCN8A-214ENST00000637709 IGHMBP2P38935 993 aaKnown RBP18.19■□□□□ 0.5
SCN8A-214ENST00000637709 MROH5Q6ZUA9 1318 aa18.19■□□□□ 0.5
SCN8A-214ENST00000637709 CASZ1Q86V15 1759 aa18.19■□□□□ 0.5
SCN8A-214ENST00000637709 ABCC12Q96J65 1359 aa18.19■□□□□ 0.5
SCN8A-214ENST00000637709 GYG1P46976 350 aa18.18■□□□□ 0.5
SCN8A-214ENST00000637709 MRE11P49959 708 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms