RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 ANKRD18AQ8IVF6 992 aa26■■□□□ 1.75
CHRNA7-228ENST00000637519 UBR3Q6ZT12 1888 aa26■■□□□ 1.75
CHRNA7-228ENST00000637519 ARAP2Q8WZ64 1704 aa26■■□□□ 1.75
CHRNA7-228ENST00000637519 AKAP11Q9UKA4 1901 aa25.99■■□□□ 1.75
CHRNA7-228ENST00000637519 NPHP1O15259 732 aa25.99■■□□□ 1.75
CHRNA7-228ENST00000637519 CYP2E1P05181 493 aaPredicted RBP25.99■■□□□ 1.75
CHRNA7-228ENST00000637519 AK2P54819 239 aa25.99■■□□□ 1.75
CHRNA7-228ENST00000637519 OSBP2Q969R2 916 aa25.99■■□□□ 1.75
CHRNA7-228ENST00000637519 TNRC6CQ9HCJ0 1690 aaKnown RBP25.98■■□□□ 1.75
CHRNA7-228ENST00000637519 ZKSCAN1P17029 563 aaPredicted RBP25.98■■□□□ 1.75
CHRNA7-228ENST00000637519 TPTE2Q6XPS3 522 aa25.98■■□□□ 1.75
CHRNA7-228ENST00000637519 PIH1D3Q9NQM4 214 aaKnown RBP25.98■■□□□ 1.75
CHRNA7-228ENST00000637519 HELLSQ9NRZ9 838 aa25.98■■□□□ 1.75
CHRNA7-228ENST00000637519 TXNRD1Q16881 649 aa25.97■■□□□ 1.75
CHRNA7-228ENST00000637519 SLC27A3Q5K4L6 730 aa25.97■■□□□ 1.75
CHRNA7-228ENST00000637519 SSFA2P28290 1259 aa25.97■■□□□ 1.75
CHRNA7-228ENST00000637519 ARID4AP29374 1257 aaPredicted RBP25.97■■□□□ 1.75
CHRNA7-228ENST00000637519 MCM2P49736 904 aa25.97■■□□□ 1.75
CHRNA7-228ENST00000637519 NLRP3Q96P20 1036 aa25.97■■□□□ 1.75
CHRNA7-228ENST00000637519 BCAMP50895 628 aa25.96■■□□□ 1.75
CHRNA7-228ENST00000637519 CIZ1Q9ULV3 898 aaPredicted RBP25.96■■□□□ 1.75
CHRNA7-228ENST00000637519 PKP1Q13835 747 aa25.95■■□□□ 1.75
CHRNA7-228ENST00000637519 WASHC4Q2M389 1173 aa25.95■■□□□ 1.75
CHRNA7-228ENST00000637519 RUFY3Q7L099 469 aa25.95■■□□□ 1.75
CHRNA7-228ENST00000637519 SLC51AQ86UW1 340 aa25.95■■□□□ 1.75
CHRNA7-228ENST00000637519 ZNF512BQ96KM6 892 aaPredicted RBP25.95■■□□□ 1.75
CHRNA7-228ENST00000637519 HMG20BQ9P0W2 317 aa25.95■■□□□ 1.75
CHRNA7-228ENST00000637519 CARMIL3Q8ND23 1372 aa25.95■■□□□ 1.75
CHRNA7-228ENST00000637519 RPAP1Q9BWH6 1393 aaPredicted RBP25.95■■□□□ 1.75
CHRNA7-228ENST00000637519 A0A0G2JLW4 131 aa25.95■■□□□ 1.74
CHRNA7-228ENST00000637519 RASGRF1Q13972 1273 aa25.95■■□□□ 1.74
CHRNA7-228ENST00000637519 TCEANC2Q96MN5 208 aa25.95■■□□□ 1.74
CHRNA7-228ENST00000637519 ZSWIM6Q9HCJ5 1215 aa25.95■■□□□ 1.74
CHRNA7-228ENST00000637519 GYS1P13807 737 aa25.94■■□□□ 1.74
CHRNA7-228ENST00000637519 RAB3GAP1Q15042 981 aa25.94■■□□□ 1.74
CHRNA7-228ENST00000637519 TNPO1Q92973 898 aaKnown RBP25.94■■□□□ 1.74
CHRNA7-228ENST00000637519 ADRA2BP18089 450 aa25.94■■□□□ 1.74
CHRNA7-228ENST00000637519 RNF20Q5VTR2 975 aa25.94■■□□□ 1.74
CHRNA7-228ENST00000637519 PUS7LQ9H0K6 701 aaKnown RBP25.94■■□□□ 1.74
CHRNA7-228ENST00000637519 PDRG1Q9NUG6 133 aa25.94■■□□□ 1.74
CHRNA7-228ENST00000637519 BSDC1Q9NW68 430 aaPredicted RBP25.94■■□□□ 1.74
CHRNA7-228ENST00000637519 A0A1B0GUL6 1792 aa25.93■■□□□ 1.74
CHRNA7-228ENST00000637519 IDH1O75874 414 aaKnown RBP25.93■■□□□ 1.74
CHRNA7-228ENST00000637519 MINPP1Q9UNW1 487 aa25.93■■□□□ 1.74
CHRNA7-228ENST00000637519 CYP46A1Q9Y6A2 500 aa25.93■■□□□ 1.74
CHRNA7-228ENST00000637519 MYO5AQ9Y4I1 1855 aaKnown RBP25.93■■□□□ 1.74
CHRNA7-228ENST00000637519 CYP21A2P08686 494 aa25.92■■□□□ 1.74
CHRNA7-228ENST00000637519 UQCRFS1P1P0C7P4 283 aa25.92■■□□□ 1.74
CHRNA7-228ENST00000637519 IQSEC3Q9UPP2 1182 aaPredicted RBP25.92■■□□□ 1.74
CHRNA7-228ENST00000637519 U3KPZ7 1027 aaPredicted RBP25.92■■□□□ 1.74
CHRNA7-228ENST00000637519 LARGE1O95461 756 aa25.92■■□□□ 1.74
CHRNA7-228ENST00000637519 HSPD1P10809 573 aaKnown RBP25.92■■□□□ 1.74
CHRNA7-228ENST00000637519 CUL4AQ13619 759 aa25.92■■□□□ 1.74
CHRNA7-228ENST00000637519 CNBD1Q8NA66 436 aa25.92■■□□□ 1.74
CHRNA7-228ENST00000637519 SPATA5Q8NB90 893 aa25.92■■□□□ 1.74
CHRNA7-228ENST00000637519 TM6SF1Q9BZW5 370 aa25.92■■□□□ 1.74
CHRNA7-228ENST00000637519 WWC3Q9ULE0 1092 aa25.91■■□□□ 1.74
CHRNA7-228ENST00000637519 RXRBP28702 533 aa25.91■■□□□ 1.74
CHRNA7-228ENST00000637519 ZNF827Q17R98 1081 aa25.91■■□□□ 1.74
CHRNA7-228ENST00000637519 FOXP2O15409 715 aa25.9■■□□□ 1.74
CHRNA7-228ENST00000637519 DTNBO60941 627 aa25.9■■□□□ 1.74
CHRNA7-228ENST00000637519 APBA3O96018 575 aa25.9■■□□□ 1.74
CHRNA7-228ENST00000637519 TM4SF1P30408 202 aa25.9■■□□□ 1.74
CHRNA7-228ENST00000637519 GYG1P46976 350 aa25.9■■□□□ 1.74
CHRNA7-228ENST00000637519 SLC9C2Q5TAH2 1124 aa25.9■■□□□ 1.74
CHRNA7-228ENST00000637519 APPBP2Q92624 585 aa25.9■■□□□ 1.74
CHRNA7-228ENST00000637519 RPS8P62241 208 aaKnown RBP25.89■■□□□ 1.74
CHRNA7-228ENST00000637519 ZFYP08048 801 aaPredicted RBP25.89■■□□□ 1.73
CHRNA7-228ENST00000637519 KLRK1P26718 216 aa25.89■■□□□ 1.73
CHRNA7-228ENST00000637519 ADD2P35612 726 aa25.89■■□□□ 1.73
CHRNA7-228ENST00000637519 TTLL5Q6EMB2 1281 aa25.89■■□□□ 1.73
CHRNA7-228ENST00000637519 PRR5LQ6MZQ0 368 aa25.89■■□□□ 1.73
CHRNA7-228ENST00000637519 DSCC1Q9BVC3 393 aa25.89■■□□□ 1.73
CHRNA7-228ENST00000637519 MYH7P12883 1935 aa25.88■■□□□ 1.73
CHRNA7-228ENST00000637519 LRRFIP1Q32MZ4 808 aaKnown RBP25.88■■□□□ 1.73
CHRNA7-228ENST00000637519 STOX1Q6ZVD7 989 aa25.88■■□□□ 1.73
CHRNA7-228ENST00000637519 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.88■■□□□ 1.73
CHRNA7-228ENST00000637519 MCM4P33991 863 aa25.87■■□□□ 1.73
CHRNA7-228ENST00000637519 TTF1Q15361 905 aaPredicted RBP25.87■■□□□ 1.73
CHRNA7-228ENST00000637519 BLOC1S2Q6QNY1 142 aa25.87■■□□□ 1.73
CHRNA7-228ENST00000637519 TICAM2Q86XR7 235 aa25.87■■□□□ 1.73
CHRNA7-228ENST00000637519 LIMCH1Q9UPQ0 1083 aa25.87■■□□□ 1.73
CHRNA7-228ENST00000637519 PSMA5P28066 241 aa25.87■■□□□ 1.73
CHRNA7-228ENST00000637519 RGS17Q9UGC6 210 aaPredicted RBP25.87■■□□□ 1.73
CHRNA7-228ENST00000637519 GPAA1O43292 621 aa25.86■■□□□ 1.73
CHRNA7-228ENST00000637519 RPS6KB1P23443 525 aa25.86■■□□□ 1.73
CHRNA7-228ENST00000637519 CWC22Q9HCG8 908 aaKnown RBP25.86■■□□□ 1.73
CHRNA7-228ENST00000637519 ZNF532Q9HCE3 1301 aa25.86■■□□□ 1.73
CHRNA7-228ENST00000637519 PDE6AP16499 860 aa25.86■■□□□ 1.73
CHRNA7-228ENST00000637519 TSGA10IPQ3SY00 556 aa25.86■■□□□ 1.73
CHRNA7-228ENST00000637519 DDR1Q08345 913 aa25.85■■□□□ 1.73
CHRNA7-228ENST00000637519 TFCP2L1Q9NZI6 479 aa25.85■■□□□ 1.73
CHRNA7-228ENST00000637519 COL1A1P02452 1464 aaPredicted RBP25.85■■□□□ 1.73
CHRNA7-228ENST00000637519 SERPINB2P05120 415 aa25.84■■□□□ 1.73
CHRNA7-228ENST00000637519 FOXD4L5Q5VV16 416 aaPredicted RBP25.84■■□□□ 1.73
CHRNA7-228ENST00000637519 FOXD4L4Q8WXT5 416 aaPredicted RBP25.84■■□□□ 1.73
CHRNA7-228ENST00000637519 NEK1Q96PY6 1258 aa25.84■■□□□ 1.73
CHRNA7-228ENST00000637519 TPCN1Q9ULQ1 816 aa25.84■■□□□ 1.73
CHRNA7-228ENST00000637519 TCRBV5S4A2TA0A5A2 114 aa25.83■■□□□ 1.73
CHRNA7-228ENST00000637519 UBE4AQ14139 1066 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms