RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 BARGINQ6ZT62 677 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 DDX46Q7L014 1031 aaKnown RBP8.3□□□□□ -1.08
GABRB3-221ENST00000636690 ZNF34Q8IZ26 560 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 TTLL11Q8NHH1 800 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 SMARCC1Q92922 1105 aaPredicted RBP8.3□□□□□ -1.08
GABRB3-221ENST00000636690 XAGE2Q96GT9 111 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 RBM27Q9P2N5 1060 aaKnown RBP8.3□□□□□ -1.08
GABRB3-221ENST00000636690 ASAP1Q9ULH1 1129 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 CNPY2Q9Y2B0 182 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 MYH7P12883 1935 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 VPS37CA5D8V6 355 aaPredicted RBP8.29□□□□□ -1.08
GABRB3-221ENST00000636690 E7EWF7 191 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 CTAGE5O15320 804 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 CCDC192P0DO97 292 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 TIMM10P62072 90 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 FGD1P98174 961 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 DNM1Q05193 864 aaKnown RBP8.29□□□□□ -1.08
GABRB3-221ENST00000636690 ALX1Q15699 326 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.29□□□□□ -1.08
GABRB3-221ENST00000636690 Q6ZUG5 572 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 VGLL2Q8N8G2 317 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 EDC3Q96F86 508 aaKnown RBP8.29□□□□□ -1.08
GABRB3-221ENST00000636690 FUCA2Q9BTY2 467 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 USP25Q9UHP3 1055 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 NSFL1CQ9UNZ2 370 aaKnown RBP8.29□□□□□ -1.08
GABRB3-221ENST00000636690 TCHHQ07283 1943 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 NUP98P52948 1817 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 DDX60Q8IY21 1712 aaKnown RBP8.29□□□□□ -1.08
GABRB3-221ENST00000636690 DOT1LQ8TEK3 1739 aa8.29□□□□□ -1.08
GABRB3-221ENST00000636690 GOLGA6L4A6NEF3 574 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 IRS4O14654 1257 aaPredicted RBP8.28□□□□□ -1.08
GABRB3-221ENST00000636690 FIBPO43427 364 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 GADD45BO75293 160 aaPredicted RBP8.28□□□□□ -1.08
GABRB3-221ENST00000636690 PDE8BO95263 885 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 ITGA6P23229 1130 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 NT5C2P49902 561 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 RCAN1P53805 252 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 EIF5P55010 431 aaKnown RBP8.28□□□□□ -1.08
GABRB3-221ENST00000636690 RESTQ13127 1097 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 PUM3Q15397 648 aaKnown RBP8.28□□□□□ -1.08
GABRB3-221ENST00000636690 METTL24Q5JXM2 366 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 FOXD4L5Q5VV16 416 aaPredicted RBP8.28□□□□□ -1.08
GABRB3-221ENST00000636690 CLEC4GQ6UXB4 293 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 LDHAL6AQ6ZMR3 332 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 NSUN7Q8NE18 718 aaKnown RBP8.28□□□□□ -1.08
GABRB3-221ENST00000636690 FOXD4L4Q8WXT5 416 aaPredicted RBP8.28□□□□□ -1.08
GABRB3-221ENST00000636690 LPIN2Q92539 896 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 ZNF396Q96N95 335 aaPredicted RBP8.28□□□□□ -1.08
GABRB3-221ENST00000636690 ARXQ96QS3 562 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 TBC1D2BQ9UPU7 963 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 ZKSCAN5Q9Y2L8 839 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.28□□□□□ -1.08
GABRB3-221ENST00000636690 SPATA31A1Q5TZJ5 1347 aa8.28□□□□□ -1.08
GABRB3-221ENST00000636690 LAMA4Q16363 1823 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 NID2Q14112 1375 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 H3BQV1 296 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 CDKL5O76039 1030 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 GNAT2P19087 354 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 FGFR2P21802 821 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 ADD2P35612 726 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 SCRN1Q12765 414 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 MAP3K11Q16584 847 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 IFFO2Q5TF58 517 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 STOX1Q6ZVD7 989 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 TTC6Q86TZ1 520 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 DZIP3Q86Y13 1208 aaKnown RBP8.27□□□□□ -1.09
GABRB3-221ENST00000636690 NECAB1Q8N987 351 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 NCOA7Q8NI08 942 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 LEO1Q8WVC0 666 aaPredicted RBP8.27□□□□□ -1.09
GABRB3-221ENST00000636690 JARID2Q92833 1246 aaPredicted RBP8.27□□□□□ -1.09
GABRB3-221ENST00000636690 BRF1Q92994 677 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 OSBP2Q969R2 916 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 FAM89AQ96GI7 184 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 SPATA32Q96LK8 384 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 PUS3Q9BZE2 481 aaKnown RBP8.27□□□□□ -1.09
GABRB3-221ENST00000636690 NUP62CLQ9H1M0 184 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 CCDC87Q9NVE4 849 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 TRMT112Q9UI30 125 aaKnown RBP8.27□□□□□ -1.09
GABRB3-221ENST00000636690 ZNF652Q9Y2D9 606 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 AKAP11Q9UKA4 1901 aa8.27□□□□□ -1.09
GABRB3-221ENST00000636690 TIAM2Q8IVF5 1701 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 LTBP4Q8N2S1 1624 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 BCORQ6W2J9 1755 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 SLIT2O94813 1529 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 SLC5A1P13866 664 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 FKBP4Q02790 459 aaKnown RBP eCLIP8.26□□□□□ -1.09
GABRB3-221ENST00000636690 TRDNQ13061 729 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 CCDC152Q4G0S7 254 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 CCDC129Q6ZRS4 1044 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 BRAPQ7Z569 592 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 RALYLQ86SE5 291 aaKnown RBP8.26□□□□□ -1.09
GABRB3-221ENST00000636690 MB21D2Q8IYB1 491 aaPredicted RBP8.26□□□□□ -1.09
GABRB3-221ENST00000636690 FAM200AQ8TCP9 573 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 ZNF594Q96JF6 807 aaPredicted RBP8.26□□□□□ -1.09
GABRB3-221ENST00000636690 TMEM87BQ96K49 555 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 SEC62Q99442 399 aaKnown RBP8.26□□□□□ -1.09
GABRB3-221ENST00000636690 CDC5LQ99459 802 aaKnown RBP8.26□□□□□ -1.09
GABRB3-221ENST00000636690 CLSTN2Q9H4D0 955 aa8.26□□□□□ -1.09
GABRB3-221ENST00000636690 GDPD2Q9HCC8 539 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms