RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337		Q7L0L9	218 aa		12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	USP17L1	Q7RTZ2	530 aa		12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	LRP10	Q7Z4F1	713 aa		12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	PTPN18	Q99952	460 aa		12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	PODXL2	Q9NZ53	605 aa		12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	ANKIB1	Q9P2G1	1089 aa		12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	GGA1	Q9UJY5	639 aa		12.98	□□□□□ -0.33
SPTAN1-231	ENST00000636337	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.97	□□□□□ -0.33
SPTAN1-231	ENST00000636337	ANXA1	P04083	346 aa		12.97	□□□□□ -0.33
SPTAN1-231	ENST00000636337	HSPA5	P11021	654 aa	Known RBP	12.97	□□□□□ -0.33
SPTAN1-231	ENST00000636337	SF3B3	Q15393	1217 aa	Known RBP	12.97	□□□□□ -0.33
SPTAN1-231	ENST00000636337	PROSER3	Q2NL68	480 aa		12.97	□□□□□ -0.33
SPTAN1-231	ENST00000636337	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.97	□□□□□ -0.33
SPTAN1-231	ENST00000636337	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
SPTAN1-231	ENST00000636337	OGFOD1	Q8N543	542 aa		12.97	□□□□□ -0.33
SPTAN1-231	ENST00000636337	PNISR	Q8TF01	805 aa	Known RBP	12.97	□□□□□ -0.33
SPTAN1-231	ENST00000636337	GJA5	P36382	358 aa		12.96	□□□□□ -0.33
SPTAN1-231	ENST00000636337	RPS8	P62241	208 aa	Known RBP	12.96	□□□□□ -0.33
SPTAN1-231	ENST00000636337	PDIA6	Q15084	440 aa		12.96	□□□□□ -0.33
SPTAN1-231	ENST00000636337	MTFR1	Q15390	333 aa		12.96	□□□□□ -0.33
SPTAN1-231	ENST00000636337	UBE2Q1	Q7Z7E8	422 aa		12.96	□□□□□ -0.33
SPTAN1-231	ENST00000636337	MXD3	Q9BW11	206 aa		12.96	□□□□□ -0.33
SPTAN1-231	ENST00000636337	STAP2	Q9UGK3	403 aa		12.96	□□□□□ -0.33
SPTAN1-231	ENST00000636337	ZSWIM8	A7E2V4	1837 aa		12.96	□□□□□ -0.33
SPTAN1-231	ENST00000636337	ZNF646	O15015	1829 aa	Predicted RBP	12.96	□□□□□ -0.33
SPTAN1-231	ENST00000636337	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
SPTAN1-231	ENST00000636337	CNGB1	Q14028	1251 aa	Predicted RBP	12.95	□□□□□ -0.34
SPTAN1-231	ENST00000636337	MAP3K11	Q16584	847 aa		12.95	□□□□□ -0.34
SPTAN1-231	ENST00000636337	GPR153	Q6NV75	609 aa		12.95	□□□□□ -0.34
SPTAN1-231	ENST00000636337	PRDM6	Q9NQX0	595 aa		12.95	□□□□□ -0.34
SPTAN1-231	ENST00000636337	SSC5D	A1L4H1	1573 aa		12.94	□□□□□ -0.34
SPTAN1-231	ENST00000636337	TESPA1	A2RU30	521 aa	Predicted RBP	12.94	□□□□□ -0.34
SPTAN1-231	ENST00000636337	EIF2S2	P20042	333 aa	Known RBP	12.94	□□□□□ -0.34
SPTAN1-231	ENST00000636337	AIMP1	Q12904	312 aa	Known RBP	12.94	□□□□□ -0.34
SPTAN1-231	ENST00000636337	PODN	Q7Z5L7	613 aa		12.94	□□□□□ -0.34
SPTAN1-231	ENST00000636337	NKX2-3	Q8TAU0	364 aa		12.94	□□□□□ -0.34
SPTAN1-231	ENST00000636337	FBXW7	Q969H0	707 aa		12.94	□□□□□ -0.34
SPTAN1-231	ENST00000636337	FAM89A	Q96GI7	184 aa		12.94	□□□□□ -0.34
SPTAN1-231	ENST00000636337	ARHGAP39	Q9C0H5	1083 aa		12.94	□□□□□ -0.34
SPTAN1-231	ENST00000636337	COL1A1	P02452	1464 aa	Predicted RBP	12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	PPP1R12B	O60237	982 aa	Predicted RBP	12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	EVI5	O60447	810 aa		12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	TAF1C	Q15572	869 aa	Predicted RBP	12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	DACT2	Q5SW24	774 aa		12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	COPS6	Q7L5N1	327 aa		12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	XAGE3	Q8WTP9	111 aa		12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	DEFB129	Q9H1M3	183 aa		12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	ZFYVE28	Q9HCC9	887 aa		12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	MTMR10	Q9NXD2	777 aa		12.93	□□□□□ -0.34
SPTAN1-231	ENST00000636337	GJA8	P48165	433 aa		12.92	□□□□□ -0.34
SPTAN1-231	ENST00000636337	RTL5	Q5HYW3	569 aa	Predicted RBP	12.92	□□□□□ -0.34
SPTAN1-231	ENST00000636337	EYS	Q5T1H1	3165 aa		12.91	□□□□□ -0.34
SPTAN1-231	ENST00000636337	MYO3B	Q8WXR4	1341 aa		12.91	□□□□□ -0.34
SPTAN1-231	ENST00000636337	UNCX	A6NJT0	531 aa		12.91	□□□□□ -0.34
SPTAN1-231	ENST00000636337	FARP2	O94887	1054 aa	Predicted RBP	12.91	□□□□□ -0.34
SPTAN1-231	ENST00000636337	KIF22	Q14807	665 aa		12.91	□□□□□ -0.34
SPTAN1-231	ENST00000636337	SEC31B	Q9NQW1	1179 aa		12.91	□□□□□ -0.34
SPTAN1-231	ENST00000636337	PER1	O15534	1290 aa	Predicted RBP	12.9	□□□□□ -0.34
SPTAN1-231	ENST00000636337	GJB1	P08034	283 aa		12.9	□□□□□ -0.34
SPTAN1-231	ENST00000636337	IREB2	P48200	963 aa	Known RBP	12.9	□□□□□ -0.34
SPTAN1-231	ENST00000636337	LACTB	P83111	547 aa	Predicted RBP	12.9	□□□□□ -0.34
SPTAN1-231	ENST00000636337	BRI3BP	Q8WY22	251 aa		12.9	□□□□□ -0.34
SPTAN1-231	ENST00000636337	OPTN	Q96CV9	577 aa		12.9	□□□□□ -0.34
SPTAN1-231	ENST00000636337	MS4A4A	Q96JQ5	239 aa		12.9	□□□□□ -0.34
SPTAN1-231	ENST00000636337	CFAP53	Q96M91	514 aa		12.9	□□□□□ -0.34
SPTAN1-231	ENST00000636337	ELP3	Q9H9T3	547 aa		12.9	□□□□□ -0.34
SPTAN1-231	ENST00000636337	NUDC	Q9Y266	331 aa		12.9	□□□□□ -0.34
SPTAN1-231	ENST00000636337	DLG5	Q8TDM6	1919 aa		12.9	□□□□□ -0.35
SPTAN1-231	ENST00000636337	XDH	P47989	1333 aa		12.89	□□□□□ -0.35
SPTAN1-231	ENST00000636337	IRS4	O14654	1257 aa	Predicted RBP	12.89	□□□□□ -0.35
SPTAN1-231	ENST00000636337	ECM2	O94769	699 aa	Predicted RBP	12.89	□□□□□ -0.35
SPTAN1-231	ENST00000636337	GNRH1	P01148	92 aa		12.89	□□□□□ -0.35
SPTAN1-231	ENST00000636337	CCL5	P13501	91 aa		12.89	□□□□□ -0.35
SPTAN1-231	ENST00000636337	KIAA0825	Q8IV33	1275 aa		12.89	□□□□□ -0.35
SPTAN1-231	ENST00000636337	ANKRD13A	Q8IZ07	590 aa		12.89	□□□□□ -0.35
SPTAN1-231	ENST00000636337	ZBED3	Q96IU2	234 aa	Predicted RBP	12.89	□□□□□ -0.35
SPTAN1-231	ENST00000636337	RNF208	Q9H0X6	261 aa		12.89	□□□□□ -0.35
SPTAN1-231	ENST00000636337	OTOF	Q9HC10	1997 aa		12.89	□□□□□ -0.35
SPTAN1-231	ENST00000636337	CCL15-CCL14	A0A0B4J2E2	113 aa		12.88	□□□□□ -0.35
SPTAN1-231	ENST00000636337	ATP5J2-PTCD1	G3V325	749 aa		12.88	□□□□□ -0.35
SPTAN1-231	ENST00000636337	ATP2B4	P23634	1241 aa		12.88	□□□□□ -0.35
SPTAN1-231	ENST00000636337	PRMT2	P55345	433 aa		12.88	□□□□□ -0.35
SPTAN1-231	ENST00000636337	CCL15	Q16663	113 aa		12.88	□□□□□ -0.35
SPTAN1-231	ENST00000636337	SUPT20HL1	Q3ZLR7	823 aa		12.88	□□□□□ -0.35
SPTAN1-231	ENST00000636337	STRIP1	Q5VSL9	837 aa		12.88	□□□□□ -0.35
SPTAN1-231	ENST00000636337	FAM43A	Q8N2R8	423 aa		12.88	□□□□□ -0.35
SPTAN1-231	ENST00000636337	PPP2R3B	Q9Y5P8	575 aa		12.88	□□□□□ -0.35
SPTAN1-231	ENST00000636337	USP2	O75604	605 aa	Predicted RBP	12.87	□□□□□ -0.35
SPTAN1-231	ENST00000636337	COL9A1	P20849	921 aa		12.87	□□□□□ -0.35
SPTAN1-231	ENST00000636337	GRK4	P32298	578 aa		12.87	□□□□□ -0.35
SPTAN1-231	ENST00000636337	MMP14	P50281	582 aa		12.87	□□□□□ -0.35
SPTAN1-231	ENST00000636337	BCAM	P50895	628 aa		12.87	□□□□□ -0.35
SPTAN1-231	ENST00000636337	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.87	□□□□□ -0.35
SPTAN1-231	ENST00000636337	U2AF1L4	Q8WU68	220 aa	Known RBP	12.87	□□□□□ -0.35
SPTAN1-231	ENST00000636337	CNKSR2	Q8WXI2	1034 aa		12.87	□□□□□ -0.35
SPTAN1-231	ENST00000636337	GDF15	Q99988	308 aa		12.87	□□□□□ -0.35
SPTAN1-231	ENST00000636337	PRUNE2	Q8WUY3	3088 aa		12.86	□□□□□ -0.35
SPTAN1-231	ENST00000636337	MED23	Q9ULK4	1368 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms