RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 GPC1P35052 558 aa10.04□□□□□ -0.8
SMARCA2-244ENST00000635659 DPH6Q7L8W6 267 aa10.04□□□□□ -0.8
SMARCA2-244ENST00000635659 CUEDC1Q9NWM3 386 aaPredicted RBP10.04□□□□□ -0.8
SMARCA2-244ENST00000635659 GPC6Q9Y625 555 aaPredicted RBP10.04□□□□□ -0.8
SMARCA2-244ENST00000635659 A6NHS1 94 aa10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 GIPC1O14908 333 aa10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 ZIC2O95409 532 aaPredicted RBP10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 ATP2B1P20020 1258 aa10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 SLC19A1P41440 591 aa10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 RELBQ01201 579 aa10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 PTPN12Q05209 780 aaKnown RBP10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 FAM50AQ14320 339 aaKnown RBP10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 GNASQ5JWF2 1037 aa10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 IER5Q5VY09 327 aa10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 RHPN1Q8TCX5 695 aa10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 ZDHHC3Q9NYG2 299 aa10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 XIRP1Q702N8 1843 aaKnown RBP10.03□□□□□ -0.8
SMARCA2-244ENST00000635659 SPHKAPQ2M3C7 1700 aa10.02□□□□□ -0.8
SMARCA2-244ENST00000635659 PLA2G4AP47712 749 aa10.02□□□□□ -0.81
SMARCA2-244ENST00000635659 TNNI2P48788 182 aa10.02□□□□□ -0.81
SMARCA2-244ENST00000635659 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMARCA2-244ENST00000635659 ZNF654Q8IZM8 581 aa10.02□□□□□ -0.81
SMARCA2-244ENST00000635659 C7orf43Q8WVR3 580 aa10.02□□□□□ -0.81
SMARCA2-244ENST00000635659 GRIP2Q9C0E4 1043 aa10.02□□□□□ -0.81
SMARCA2-244ENST00000635659 C12orf49Q9H741 205 aa10.02□□□□□ -0.81
SMARCA2-244ENST00000635659 ZNF335Q9H4Z2 1342 aaPredicted RBP10.02□□□□□ -0.81
SMARCA2-244ENST00000635659 KANK1Q14678 1352 aa10.01□□□□□ -0.81
SMARCA2-244ENST00000635659 NPHP4O75161 1426 aaPredicted RBP10.01□□□□□ -0.81
SMARCA2-244ENST00000635659 TMEM131LA2VDJ0 1609 aa10.01□□□□□ -0.81
SMARCA2-244ENST00000635659 NBPF1Q3BBV0 1214 aa10.01□□□□□ -0.81
SMARCA2-244ENST00000635659 XKR5Q6UX68 686 aa10.01□□□□□ -0.81
SMARCA2-244ENST00000635659 DNAJC2Q99543 621 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-244ENST00000635659 SCAF11Q99590 1463 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-244ENST00000635659 CPS1P31327 1500 aa10.01□□□□□ -0.81
SMARCA2-244ENST00000635659 ALKQ9UM73 1620 aa10□□□□□ -0.81
SMARCA2-244ENST00000635659 TNFRSF21O75509 655 aa10□□□□□ -0.81
SMARCA2-244ENST00000635659 CDK11BP21127 795 aaKnown RBP10□□□□□ -0.81
SMARCA2-244ENST00000635659 WDR4P57081 412 aaKnown RBP10□□□□□ -0.81
SMARCA2-244ENST00000635659 C4orf17Q53FE4 359 aa10□□□□□ -0.81
SMARCA2-244ENST00000635659 ZNF394Q53GI3 561 aa10□□□□□ -0.81
SMARCA2-244ENST00000635659 HS2ST1Q7LGA3 356 aa10□□□□□ -0.81
SMARCA2-244ENST00000635659 USP48Q86UV5 1035 aa10□□□□□ -0.81
SMARCA2-244ENST00000635659 SNX29Q8TEQ0 813 aa10□□□□□ -0.81
SMARCA2-244ENST00000635659 DHX38Q92620 1227 aaKnown RBP10□□□□□ -0.81
SMARCA2-244ENST00000635659 ZNF395Q9H8N7 513 aaPredicted RBP10□□□□□ -0.81
SMARCA2-244ENST00000635659 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
SMARCA2-244ENST00000635659 DMGDHQ9UI17 866 aaKnown RBP10□□□□□ -0.81
SMARCA2-244ENST00000635659 INPP5FQ9Y2H2 1132 aa10□□□□□ -0.81
SMARCA2-244ENST00000635659 USP31Q70CQ4 1352 aa10□□□□□ -0.81
SMARCA2-244ENST00000635659 RACK1P63244 317 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-244ENST00000635659 SLC27A3Q5K4L6 730 aa9.99□□□□□ -0.81
SMARCA2-244ENST00000635659 SPRYD7Q5W111 196 aa9.99□□□□□ -0.81
SMARCA2-244ENST00000635659 NBPF10Q6P3W6 841 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-244ENST00000635659 CCDC74AQ96AQ1 378 aa9.99□□□□□ -0.81
SMARCA2-244ENST00000635659 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
SMARCA2-244ENST00000635659 FNDC3AQ9Y2H6 1198 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-244ENST00000635659 TIMP2P16035 220 aa9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 DNAJA1P31689 397 aaKnown RBP9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 GTF2F1P35269 517 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 IDH3AP50213 366 aa9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 ARID5AQ03989 594 aa9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 PDE12Q6L8Q7 609 aaKnown RBP9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 SNIP1Q8TAD8 396 aaKnown RBP9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 OSBPL7Q9BZF2 842 aa9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 LNPKQ9C0E8 428 aa9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 FOXD3Q9UJU5 478 aaPredicted RBP9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 PCDHGB7Q9Y5F8 929 aa9.98□□□□□ -0.81
SMARCA2-244ENST00000635659 NWD1Q149M9 1564 aa9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 TATP17735 454 aaPredicted RBP9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 ST13P50502 369 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 RNF144AP50876 292 aaPredicted RBP9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 ARSDP51689 593 aa9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 USPL1Q5W0Q7 1092 aa9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 GIMAP6Q6P9H5 292 aa9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 NOP9Q86U38 636 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 MEIOBQ8N635 442 aa9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 SRA1Q9HD15 236 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 FAM8A1Q9UBU6 413 aa9.97□□□□□ -0.81
SMARCA2-244ENST00000635659 SPATA31C2B4DYI2 1134 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 ZNF697Q5TEC3 545 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 PI16Q6UXB8 463 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 ZNF438Q7Z4V0 828 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 THEMISQ8N1K5 641 aaPredicted RBP9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 EPS8L3Q8TE67 593 aaKnown RBP9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 SRCIN1Q9C0H9 1055 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 ZFYVE28Q9HCC9 887 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 ANKIB1Q9P2G1 1089 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 GGT7Q9UJ14 662 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 TMEM2Q9UHN6 1383 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 ZFYVE9O95405 1425 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 NAIPQ13075 1403 aa9.96□□□□□ -0.82
SMARCA2-244ENST00000635659 INPP5BP32019 993 aa9.95□□□□□ -0.82
SMARCA2-244ENST00000635659 IRS1P35568 1242 aa9.95□□□□□ -0.82
SMARCA2-244ENST00000635659 TAF1CQ15572 869 aaPredicted RBP9.95□□□□□ -0.82
SMARCA2-244ENST00000635659 ZNF598Q86UK7 904 aaKnown RBP9.95□□□□□ -0.82
SMARCA2-244ENST00000635659 ZNF280CQ8ND82 737 aa9.95□□□□□ -0.82
SMARCA2-244ENST00000635659 AIDAQ96BJ3 306 aa9.95□□□□□ -0.82
SMARCA2-244ENST00000635659 HSH2DQ96JZ2 352 aa9.95□□□□□ -0.82
SMARCA2-244ENST00000635659 PKD2L1Q9P0L9 805 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms