RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 CNNM1Q9NRU3 951 aa10.03□□□□□ -0.8
PATJ-216ENST00000635214 RBM28Q9NW13 759 aaKnown RBP10.03□□□□□ -0.8
PATJ-216ENST00000635214 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.03□□□□□ -0.8
PATJ-216ENST00000635214 SOCS7O14512 581 aa10.03□□□□□ -0.8
PATJ-216ENST00000635214 CTAGE1Q96RT6 745 aa10.03□□□□□ -0.8
PATJ-216ENST00000635214 ZSWIM4Q9H7M6 989 aa10.03□□□□□ -0.8
PATJ-216ENST00000635214 GDPD2Q9HCC8 539 aa10.03□□□□□ -0.8
PATJ-216ENST00000635214 CEP126Q9P2H0 1117 aa10.03□□□□□ -0.8
PATJ-216ENST00000635214 RTL1A6NKG5 1358 aa10.03□□□□□ -0.8
PATJ-216ENST00000635214 CYLC1P35663 651 aaPredicted RBP10.02□□□□□ -0.8
PATJ-216ENST00000635214 SARNPP82979 210 aaKnown RBP10.02□□□□□ -0.8
PATJ-216ENST00000635214 SPAG1Q07617 926 aa10.02□□□□□ -0.8
PATJ-216ENST00000635214 CTCFLQ8NI51 663 aaPredicted RBP10.02□□□□□ -0.8
PATJ-216ENST00000635214 GJB2P29033 226 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 DDB1Q16531 1140 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 CCDC102BQ68D86 513 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 KRT27Q7Z3Y8 459 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 TRPM1Q7Z4N2 1603 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 ALDH1L1O75891 902 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 ZSCAN22P10073 491 aaPredicted RBP10.02□□□□□ -0.81
PATJ-216ENST00000635214 C20orf194Q5TEA3 1177 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 TBC1D9Q6ZT07 1266 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 DDX46Q7L014 1031 aaKnown RBP10.02□□□□□ -0.81
PATJ-216ENST00000635214 ERO1AQ96HE7 468 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 ZFP91Q96JP5 570 aaPredicted RBP10.02□□□□□ -0.81
PATJ-216ENST00000635214 CCDC114Q96M63 670 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 RAB34Q9BZG1 259 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 EXOC6BQ9Y2D4 811 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 UBASH3AP57075 661 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 GJD4Q96KN9 370 aaPredicted RBP10.02□□□□□ -0.81
PATJ-216ENST00000635214 SIL1Q9H173 461 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 BTG4Q9NY30 223 aa10.02□□□□□ -0.81
PATJ-216ENST00000635214 HOXB7P09629 217 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 LIG1P18858 919 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 B4GALNT4Q76KP1 1039 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.01□□□□□ -0.81
PATJ-216ENST00000635214 ADGRB2O60241 1585 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 TMCO5BA8MYB1 307 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 SETSIPP0DME0 302 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 MTIF2P46199 727 aaKnown RBP10.01□□□□□ -0.81
PATJ-216ENST00000635214 ANAPC15P60006 121 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 GIMAP6Q6P9H5 292 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 POTEDQ86YR6 584 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 ZNF830Q96NB3 372 aaPredicted RBP10.01□□□□□ -0.81
PATJ-216ENST00000635214 TTC12Q9H892 705 aaPredicted RBP10.01□□□□□ -0.81
PATJ-216ENST00000635214 CDK12Q9NYV4 1490 aaPredicted RBP10.01□□□□□ -0.81
PATJ-216ENST00000635214 GCP02774 474 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 IFNL2Q8IZJ0 200 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 MBIPQ9NS73 344 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 VPS18Q9P253 973 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 ATP2C2O75185 946 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
PATJ-216ENST00000635214 TMX1Q9H3N1 280 aa10.01□□□□□ -0.81
PATJ-216ENST00000635214 CTAGE9A4FU28 777 aa10□□□□□ -0.81
PATJ-216ENST00000635214 ZC3H6P61129 1189 aaKnown RBP10□□□□□ -0.81
PATJ-216ENST00000635214 NUCB1Q02818 461 aa10□□□□□ -0.81
PATJ-216ENST00000635214 HDXQ7Z353 690 aa10□□□□□ -0.81
PATJ-216ENST00000635214 PAIP2Q9BPZ3 127 aaKnown RBP10□□□□□ -0.81
PATJ-216ENST00000635214 TFIP11Q9UBB9 837 aaKnown RBP10□□□□□ -0.81
PATJ-216ENST00000635214 ROBO1Q9Y6N7 1651 aa10□□□□□ -0.81
PATJ-216ENST00000635214 FKBP4Q02790 459 aaKnown RBP eCLIP10□□□□□ -0.81
PATJ-216ENST00000635214 FLIIQ13045 1269 aa10□□□□□ -0.81
PATJ-216ENST00000635214 KIAA0753Q2KHM9 967 aa10□□□□□ -0.81
PATJ-216ENST00000635214 CCDC77Q9BR77 488 aa10□□□□□ -0.81
PATJ-216ENST00000635214 KIF4AO95239 1232 aa10□□□□□ -0.81
PATJ-216ENST00000635214 AKAP4Q5JQC9 854 aa10□□□□□ -0.81
PATJ-216ENST00000635214 NUTM1Q86Y26 1132 aa10□□□□□ -0.81
PATJ-216ENST00000635214 PLVAPQ9BX97 442 aa10□□□□□ -0.81
PATJ-216ENST00000635214 AKR1B10O60218 316 aa10□□□□□ -0.81
PATJ-216ENST00000635214 NAA25Q14CX7 972 aa10□□□□□ -0.81
PATJ-216ENST00000635214 ANO6Q4KMQ2 910 aa10□□□□□ -0.81
PATJ-216ENST00000635214 CCDC129Q6ZRS4 1044 aa10□□□□□ -0.81
PATJ-216ENST00000635214 CCDC50Q8IVM0 306 aa10□□□□□ -0.81
PATJ-216ENST00000635214 HOMER2Q9NSB8 354 aa10□□□□□ -0.81
PATJ-216ENST00000635214 POLKQ9UBT6 870 aa10□□□□□ -0.81
PATJ-216ENST00000635214 ZNF652Q9Y2D9 606 aa10□□□□□ -0.81
PATJ-216ENST00000635214 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.99□□□□□ -0.81
PATJ-216ENST00000635214 BIN1O00499 593 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 DNA2P51530 1060 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 AMPD3Q01432 767 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 FLAD1Q8NFF5 587 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 FAM76AQ8TAV0 307 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 N4BP3O15049 544 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 TACC1O75410 805 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 PRIM1P49642 420 aaKnown RBP9.99□□□□□ -0.81
PATJ-216ENST00000635214 RAB3GAP1Q15042 981 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 SMC5Q8IY18 1101 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 MRPL50Q8N5N7 158 aaKnown RBP9.99□□□□□ -0.81
PATJ-216ENST00000635214 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.99□□□□□ -0.81
PATJ-216ENST00000635214 HMG20BQ9P0W2 317 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 STIM2Q9P246 746 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 CLGNO14967 610 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 PLCD3Q8N3E9 789 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 PPFIBP2Q8ND30 876 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 CTNNBL1Q8WYA6 563 aaPredicted RBP9.99□□□□□ -0.81
PATJ-216ENST00000635214 TMX3Q96JJ7 454 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 SELENOOQ9BVL4 669 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 STK32BQ9NY57 414 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 IL2RBP14784 551 aa9.99□□□□□ -0.81
PATJ-216ENST00000635214 MATR3P43243 847 aaKnown RBP eCLIP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms