RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 NDUFB9Q9Y6M9 179 aa9.53□□□□□ -0.88
GPC3-204ENST00000631057 H3BQV1 296 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 RNF113AO15541 343 aaKnown RBP9.52□□□□□ -0.89
GPC3-204ENST00000631057 PFKFB2O60825 505 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 KDM4AO75164 1064 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 IFIT1P09914 478 aaKnown RBP9.52□□□□□ -0.89
GPC3-204ENST00000631057 HMGN5P82970 282 aaKnown RBP9.52□□□□□ -0.89
GPC3-204ENST00000631057 IFFO2Q5TF58 517 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 BRF1Q92994 677 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 ISCA1Q9BUE6 129 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 ZSCAN16Q9H4T2 348 aaPredicted RBP9.52□□□□□ -0.89
GPC3-204ENST00000631057 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 CEP126Q9P2H0 1117 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 AKAP2Q9Y2D5 859 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 SSUH2Q9Y2M2 353 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.52□□□□□ -0.89
GPC3-204ENST00000631057 ABCC12Q96J65 1359 aa9.52□□□□□ -0.89
GPC3-204ENST00000631057 DDX60Q8IY21 1712 aaKnown RBP9.51□□□□□ -0.89
GPC3-204ENST00000631057 A0A1B0GUL7 405 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 JAK2O60674 1132 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 DTNBO60941 627 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 TPM3P06753 285 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 TIMM10P62072 90 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 RESTQ13127 1097 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 TRIM28Q13263 835 aaKnown RBP9.51□□□□□ -0.89
GPC3-204ENST00000631057 TCIRG1Q13488 830 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 NAA16Q6N069 864 aaPredicted RBP9.51□□□□□ -0.89
GPC3-204ENST00000631057 SMARCC2Q8TAQ2 1214 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 LEO1Q8WVC0 666 aaPredicted RBP9.51□□□□□ -0.89
GPC3-204ENST00000631057 TEX13AQ9BXU3 409 aaPredicted RBP9.51□□□□□ -0.89
GPC3-204ENST00000631057 CCDC9Q9Y3X0 531 aaKnown RBP9.51□□□□□ -0.89
GPC3-204ENST00000631057 AKAP11Q9UKA4 1901 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 NHSL1Q5SYE7 1610 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 NWD2Q9ULI1 1742 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 NUP98P52948 1817 aa9.51□□□□□ -0.89
GPC3-204ENST00000631057 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 RRP9O43818 475 aaKnown RBP9.5□□□□□ -0.89
GPC3-204ENST00000631057 TOM1O60784 492 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 ZFYP08048 801 aaPredicted RBP9.5□□□□□ -0.89
GPC3-204ENST00000631057 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 LIG1P18858 919 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 CCDC57Q2TAC2 916 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 SPDYE2Q495Y8 402 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 LRRC24Q50LG9 513 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 CCDC158Q5M9N0 1113 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 KIF6Q6ZMV9 814 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 STOX1Q6ZVD7 989 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 FAM200AQ8TCP9 573 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 PLA2G12BQ9BX93 195 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 AGXT2Q9BYV1 514 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 TNMDQ9H2S6 317 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 CLSTN2Q9H4D0 955 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 TMOD3Q9NYL9 352 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 CFAP45Q9UL16 551 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 MAST3O60307 1309 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 GOLGA6L6A8MZA4 724 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 PCCAP05165 728 aaPredicted RBP9.5□□□□□ -0.89
GPC3-204ENST00000631057 HSPD1P10809 573 aaKnown RBP9.5□□□□□ -0.89
GPC3-204ENST00000631057 EXOSC10Q01780 885 aaKnown RBP9.5□□□□□ -0.89
GPC3-204ENST00000631057 TYRO3Q06418 890 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 SCRN1Q12765 414 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 CHD4Q14839 1912 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 TTC39AQ5SRH9 613 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 GORABQ5T7V8 394 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 ATL3Q6DD88 541 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 FAM173BQ6P4H8 233 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 RBM43Q6ZSC3 357 aaKnown RBP9.5□□□□□ -0.89
GPC3-204ENST00000631057 ZNF594Q96JF6 807 aaPredicted RBP9.5□□□□□ -0.89
GPC3-204ENST00000631057 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.5□□□□□ -0.89
GPC3-204ENST00000631057 TFIP11Q9UBB9 837 aaKnown RBP9.5□□□□□ -0.89
GPC3-204ENST00000631057 CTNNA3Q9UI47 895 aa9.5□□□□□ -0.89
GPC3-204ENST00000631057 R3HCC1Q9Y3T6 440 aaKnown RBP9.5□□□□□ -0.89
GPC3-204ENST00000631057 MYO5AQ9Y4I1 1855 aaKnown RBP9.49□□□□□ -0.89
GPC3-204ENST00000631057 E7EWF7 191 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 CHGBP05060 677 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 EVA1CP58658 441 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 TAF7LQ5H9L4 462 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 SASS6Q6UVJ0 657 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 FBXL16Q8N461 479 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 NSUN7Q8NE18 718 aaKnown RBP9.49□□□□□ -0.89
GPC3-204ENST00000631057 BICD2Q8TD16 824 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 PIBF1Q8WXW3 757 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 DDX11Q96FC9 970 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 ZNF274Q96GC6 653 aaPredicted RBP9.49□□□□□ -0.89
GPC3-204ENST00000631057 ARID3AQ99856 593 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 LRRC2Q9BYS8 371 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 DACT1Q9NYF0 836 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 STK24Q9Y6E0 443 aa9.49□□□□□ -0.89
GPC3-204ENST00000631057 PTPDC1A2A3K4 754 aa9.48□□□□□ -0.89
GPC3-204ENST00000631057 STARD3NLO95772 234 aa9.48□□□□□ -0.89
GPC3-204ENST00000631057 CAVIN2O95810 425 aa9.48□□□□□ -0.89
GPC3-204ENST00000631057 APOBRQ0VD83 1088 aa9.48□□□□□ -0.89
GPC3-204ENST00000631057 ZBTB38Q8NAP3 1195 aaPredicted RBP9.48□□□□□ -0.89
GPC3-204ENST00000631057 ZNF396Q96N95 335 aaPredicted RBP9.48□□□□□ -0.89
GPC3-204ENST00000631057 SGIP1Q9BQI5 828 aa9.48□□□□□ -0.89
GPC3-204ENST00000631057 PUS3Q9BZE2 481 aaKnown RBP9.48□□□□□ -0.89
GPC3-204ENST00000631057 STRN4Q9NRL3 753 aa9.48□□□□□ -0.89
GPC3-204ENST00000631057 MRVI1Q9Y6F6 885 aa9.48□□□□□ -0.89
GPC3-204ENST00000631057 LRP6O75581 1613 aa9.48□□□□□ -0.89
GPC3-204ENST00000631057 CDHR2Q9BYE9 1310 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms