RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 SAP130Q9H0E3 1048 aa6.74□□□□□ -1.33
VPS8-228ENST00000628962 UBAP1LF5GYI3 381 aa6.73□□□□□ -1.33
VPS8-228ENST00000628962 BMP3P12645 472 aa6.73□□□□□ -1.33
VPS8-228ENST00000628962 PREPP48147 710 aa6.73□□□□□ -1.33
VPS8-228ENST00000628962 FAM117BQ6P1L5 589 aa6.73□□□□□ -1.33
VPS8-228ENST00000628962 BEND4Q6ZU67 534 aa6.73□□□□□ -1.33
VPS8-228ENST00000628962 KLHDC7BQ96G42 594 aa6.73□□□□□ -1.33
VPS8-228ENST00000628962 A6NJR5 290 aa6.72□□□□□ -1.33
VPS8-228ENST00000628962 HOXA10P31260 410 aaPredicted RBP6.72□□□□□ -1.33
VPS8-228ENST00000628962 ANKRD34AQ69YU3 496 aa6.72□□□□□ -1.33
VPS8-228ENST00000628962 C16orf46Q6P387 395 aa6.72□□□□□ -1.33
VPS8-228ENST00000628962 PIK3R5Q8WYR1 880 aa6.72□□□□□ -1.33
VPS8-228ENST00000628962 PBX4Q9BYU1 374 aa6.72□□□□□ -1.33
VPS8-228ENST00000628962 ADAM19Q9H013 955 aa6.72□□□□□ -1.33
VPS8-228ENST00000628962 SEC31BQ9NQW1 1179 aa6.72□□□□□ -1.33
VPS8-228ENST00000628962 SH2B1Q9NRF2 756 aaPredicted RBP6.72□□□□□ -1.33
VPS8-228ENST00000628962 HIF3AQ9Y2N7 669 aa6.72□□□□□ -1.33
VPS8-228ENST00000628962 SCNN1AP37088 669 aa6.71□□□□□ -1.34
VPS8-228ENST00000628962 ABI1Q8IZP0 508 aa6.71□□□□□ -1.34
VPS8-228ENST00000628962 CEP120Q8N960 986 aa6.71□□□□□ -1.34
VPS8-228ENST00000628962 COL26A1Q96A83 441 aa6.71□□□□□ -1.34
VPS8-228ENST00000628962 KCNF1Q9H3M0 494 aa6.71□□□□□ -1.34
VPS8-228ENST00000628962 FAM13BQ9NYF5 915 aa6.71□□□□□ -1.34
VPS8-228ENST00000628962 WDR64B1ANS9 1081 aa6.7□□□□□ -1.34
VPS8-228ENST00000628962 TNFRSF10BO14763 440 aa6.7□□□□□ -1.34
VPS8-228ENST00000628962 SART1O43290 800 aaKnown RBP6.7□□□□□ -1.34
VPS8-228ENST00000628962 PTPRAP18433 802 aa6.7□□□□□ -1.34
VPS8-228ENST00000628962 JAG1P78504 1218 aa6.7□□□□□ -1.34
VPS8-228ENST00000628962 OCLNQ16625 522 aa6.7□□□□□ -1.34
VPS8-228ENST00000628962 SWI5Q1ZZU3 235 aa6.7□□□□□ -1.34
VPS8-228ENST00000628962 TTC39BQ5VTQ0 682 aaPredicted RBP6.7□□□□□ -1.34
VPS8-228ENST00000628962 PRIMPOLQ96LW4 560 aa6.7□□□□□ -1.34
VPS8-228ENST00000628962 POP1Q99575 1024 aaKnown RBP6.7□□□□□ -1.34
VPS8-228ENST00000628962 H3BRJ5 948 aa6.69□□□□□ -1.34
VPS8-228ENST00000628962 CYP2E1P05181 493 aaPredicted RBP6.69□□□□□ -1.34
VPS8-228ENST00000628962 CFAP70Q5T0N1 1121 aa6.69□□□□□ -1.34
VPS8-228ENST00000628962 WNT8BQ93098 351 aa6.69□□□□□ -1.34
VPS8-228ENST00000628962 ZMYND15Q9H091 742 aa6.69□□□□□ -1.34
VPS8-228ENST00000628962 RNF208Q9H0X6 261 aa6.69□□□□□ -1.34
VPS8-228ENST00000628962 ABI2Q9NYB9 513 aaPredicted RBP6.69□□□□□ -1.34
VPS8-228ENST00000628962 PIM2Q9P1W9 311 aa6.69□□□□□ -1.34
VPS8-228ENST00000628962 FNDC3AQ9Y2H6 1198 aaKnown RBP6.69□□□□□ -1.34
VPS8-228ENST00000628962 PRKCSHP14314 528 aaPredicted RBP6.68□□□□□ -1.34
VPS8-228ENST00000628962 PIP4K2BP78356 416 aa6.68□□□□□ -1.34
VPS8-228ENST00000628962 MSMPQ1L6U9 139 aa6.68□□□□□ -1.34
VPS8-228ENST00000628962 OGFOD2Q6N063 350 aa6.68□□□□□ -1.34
VPS8-228ENST00000628962 MFSD14AQ96MC6 490 aa6.68□□□□□ -1.34
VPS8-228ENST00000628962 OSGEPQ9NPF4 335 aa6.68□□□□□ -1.34
VPS8-228ENST00000628962 PRMT3O60678 531 aa6.67□□□□□ -1.34
VPS8-228ENST00000628962 ZAP70P43403 619 aa6.67□□□□□ -1.34
VPS8-228ENST00000628962 NFXL1Q6ZNB6 911 aa6.67□□□□□ -1.34
VPS8-228ENST00000628962 CBLL1Q75N03 491 aa6.67□□□□□ -1.34
VPS8-228ENST00000628962 NCAPG2Q86XI2 1143 aa6.67□□□□□ -1.34
VPS8-228ENST00000628962 RUSC1Q9BVN2 902 aa6.67□□□□□ -1.34
VPS8-228ENST00000628962 NOVA2Q9UNW9 492 aaKnown RBP6.67□□□□□ -1.34
VPS8-228ENST00000628962 ACIN1Q9UKV3 1341 aaKnown RBP6.67□□□□□ -1.34
VPS8-228ENST00000628962 MEGF11A6BM72 1044 aa6.66□□□□□ -1.34
VPS8-228ENST00000628962 F13BP05160 661 aa6.66□□□□□ -1.34
VPS8-228ENST00000628962 MAP4P27816 1152 aaKnown RBP6.66□□□□□ -1.34
VPS8-228ENST00000628962 NLRP12P59046 1061 aa6.66□□□□□ -1.34
VPS8-228ENST00000628962 FDX2Q6P4F2 183 aa6.66□□□□□ -1.34
VPS8-228ENST00000628962 CAPN12Q6ZSI9 719 aa6.66□□□□□ -1.34
VPS8-228ENST00000628962 GPR152Q8TDT2 470 aa6.66□□□□□ -1.34
VPS8-228ENST00000628962 KRTAP4-9Q9BYQ8 210 aa6.66□□□□□ -1.34
VPS8-228ENST00000628962 CCDC39Q9UFE4 941 aa6.66□□□□□ -1.34
VPS8-228ENST00000628962 FAM177BA6PVY3 158 aa6.65□□□□□ -1.34
VPS8-228ENST00000628962 NFKBIEO00221 500 aa6.65□□□□□ -1.34
VPS8-228ENST00000628962 PRNPP04156 253 aa6.65□□□□□ -1.34
VPS8-228ENST00000628962 FOSL1P15407 271 aa6.65□□□□□ -1.34
VPS8-228ENST00000628962 CABP4P57796 275 aa6.65□□□□□ -1.34
VPS8-228ENST00000628962 FAM69CQ0P6D2 419 aa6.65□□□□□ -1.34
VPS8-228ENST00000628962 CPSF6Q16630 551 aaKnown RBP eCLIP6.65□□□□□ -1.34
VPS8-228ENST00000628962 CDCA8Q53HL2 280 aa6.65□□□□□ -1.34
VPS8-228ENST00000628962 SALL4Q9UJQ4 1053 aa6.65□□□□□ -1.34
VPS8-228ENST00000628962 ANGEL1Q9UNK9 670 aaKnown RBP6.65□□□□□ -1.34
VPS8-228ENST00000628962 LEMD3Q9Y2U8 911 aa6.65□□□□□ -1.34
VPS8-228ENST00000628962 ZBTB39O15060 712 aa6.64□□□□□ -1.35
VPS8-228ENST00000628962 GAS2O43903 313 aaKnown RBP6.64□□□□□ -1.35
VPS8-228ENST00000628962 RFX1P22670 979 aa6.64□□□□□ -1.35
VPS8-228ENST00000628962 SGO2Q562F6 1265 aa6.64□□□□□ -1.35
VPS8-228ENST00000628962 GIMAP7Q8NHV1 300 aa6.64□□□□□ -1.35
VPS8-228ENST00000628962 ATG3Q9NT62 314 aa6.64□□□□□ -1.35
VPS8-228ENST00000628962 TMEM63CQ9P1W3 806 aa6.64□□□□□ -1.35
VPS8-228ENST00000628962 ZMIZ1Q9ULJ6 1067 aa6.64□□□□□ -1.35
VPS8-228ENST00000628962 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.64□□□□□ -1.35
VPS8-228ENST00000628962 PDE12Q6L8Q7 609 aaKnown RBP6.63□□□□□ -1.35
VPS8-228ENST00000628962 POU5F2Q8N7G0 328 aa6.63□□□□□ -1.35
VPS8-228ENST00000628962 ELP3Q9H9T3 547 aa6.63□□□□□ -1.35
VPS8-228ENST00000628962 CNTN3Q9P232 1028 aa6.63□□□□□ -1.35
VPS8-228ENST00000628962 KANSL3Q9P2N6 904 aa6.63□□□□□ -1.35
VPS8-228ENST00000628962 SOX13Q9UN79 622 aa6.63□□□□□ -1.35
VPS8-228ENST00000628962 C8AP07357 584 aa6.62□□□□□ -1.35
VPS8-228ENST00000628962 ACPPP15309 386 aa6.62□□□□□ -1.35
VPS8-228ENST00000628962 ELOAQ14241 798 aaKnown RBP6.62□□□□□ -1.35
VPS8-228ENST00000628962 COL19A1Q14993 1142 aa6.62□□□□□ -1.35
VPS8-228ENST00000628962 HGSNATQ68CP4 663 aa6.62□□□□□ -1.35
VPS8-228ENST00000628962 VSIG10LQ86VR7 867 aa6.62□□□□□ -1.35
VPS8-228ENST00000628962 SHISA5Q8N114 240 aa6.62□□□□□ -1.35
VPS8-228ENST00000628962 FBXL6Q8N531 539 aa6.62□□□□□ -1.35
VPS8-228ENST00000628962 SLC7A3Q8WY07 619 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms