RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 KCNQ4P56696 695 aa11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 TMEM266Q2M3C6 531 aa11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 KLHDC4Q8TBB5 520 aa11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 CPSF1Q10570 1443 aaKnown RBP11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 BAG4O95429 457 aaKnown RBP11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 DBNDD2Q9BQY9 259 aa11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 ATF5Q9Y2D1 282 aaPredicted RBP11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 PPP4R3AQ6IN85 833 aa11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
SRGAP2-217ENST00000624873 BBOX1O75936 387 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 ADRA2BP18089 450 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 CCT2P78371 535 aaKnown RBP11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 RBM8AQ9Y5S9 174 aaKnown RBP11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 CHMP4BP1P59074 171 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 SMC5Q8IY18 1101 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 PICK1Q9NRD5 415 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 DLC1Q96QB1 1528 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 ZBTB43O43298 467 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 PRPF40AO75400 957 aaKnown RBP11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 NMIQ13287 307 aaPredicted RBP11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 CC2D2BQ6DHV5 1058 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 CLEC4GQ6UXB4 293 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 DACH1Q9UI36 760 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 FILIP1LQ4L180 1135 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 ESYT1Q9BSJ8 1104 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 ZNF408Q9H9D4 720 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 RAD50Q92878 1312 aa11.86□□□□□ -0.51
SRGAP2-217ENST00000624873 MBD4O95243 580 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 PDE4CQ08493 712 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 TNFAIP1Q13829 316 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 HOMER1Q86YM7 354 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 CALM1P0DP23 149 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 CALM2P0DP24 149 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 CALM3P0DP25 149 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 GLIPR1L2Q4G1C9 344 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 SCLT1Q96NL6 688 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 HELLSQ9NRZ9 838 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 CEP57L1Q8IYX8 460 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 ORC3Q9UBD5 711 aaPredicted RBP11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 GTF2IP78347 998 aa11.85□□□□□ -0.51
SRGAP2-217ENST00000624873 KLF18A0A0U1RQI7 1052 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 MMP10P09238 476 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 CT47A1Q5JQC4 288 aaPredicted RBP11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 SOS2Q07890 1332 aaPredicted RBP11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 BEND3Q5T5X7 828 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 CCDC148Q8NFR7 591 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 USP44Q9H0E7 712 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 TRPM1Q7Z4N2 1603 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 BRF1Q92994 677 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 BEGAINQ9BUH8 593 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 CCDC39Q9UFE4 941 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 MFSD14BQ5SR56 506 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 CCDC171Q6TFL3 1326 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 SPATA5Q8NB90 893 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 TEKT1Q969V4 418 aa11.84□□□□□ -0.51
SRGAP2-217ENST00000624873 SPATA31D1Q6ZQQ2 1576 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 NEXMIFQ5QGS0 1516 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 RTN1Q16799 776 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 FERMT3Q86UX7 667 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 APPBP2Q92624 585 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 MADDQ8WXG6 1647 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 ANAPC15P60006 121 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 EAPPQ56P03 285 aaPredicted RBP11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 SLC26A6Q9BXS9 759 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 ATG3Q9NT62 314 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 LEMD3Q9Y2U8 911 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 XDHP47989 1333 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 PPEF1O14829 653 aaPredicted RBP11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 NAP1L5Q96NT1 182 aaPredicted RBP11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 LRRIQ1Q96JM4 1722 aa11.83□□□□□ -0.52
SRGAP2-217ENST00000624873 TMOD4Q9NZQ9 345 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 TTF2Q9UNY4 1162 aaKnown RBP11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 FRMPD1Q5SYB0 1578 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 UBE4AQ14139 1066 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 DALRD3Q5D0E6 543 aaKnown RBP11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 SCAND2PQ9GZW5 306 aaPredicted RBP11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 FER1L4A9Z1Z3 1794 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 MATR3P43243 847 aaKnown RBP eCLIP11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 PROSER3Q2NL68 480 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 TTLL5Q6EMB2 1281 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 ARHGEF10LQ9HCE6 1279 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 NARFQ9UHQ1 456 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 RTL9Q8NET4 1388 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 PLS1Q14651 629 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 ODF2Q5BJF6 829 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 DCCP43146 1447 aa11.82□□□□□ -0.52
SRGAP2-217ENST00000624873 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
SRGAP2-217ENST00000624873 SPATA31A1Q5TZJ5 1347 aa11.81□□□□□ -0.52
SRGAP2-217ENST00000624873 PRC1O43663 620 aa11.81□□□□□ -0.52
SRGAP2-217ENST00000624873 SMC2O95347 1197 aa11.81□□□□□ -0.52
SRGAP2-217ENST00000624873 SSFA2P28290 1259 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms