RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 PAFAH1B1P43034 410 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 ARF3P61204 181 aaPredicted RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 ARF1P84077 181 aaKnown RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 HDAC1Q13547 482 aaPredicted RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.93□□□□□ -1.78
ATRX-212ENST00000623706 TBC1D22AQ8WUA7 517 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 NLRP7Q8WX94 980 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 TRIM56Q9BRZ2 755 aaKnown RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 FTOQ9C0B1 505 aaKnown RBP eCLIP3.93□□□□□ -1.78
ATRX-212ENST00000623706 MRPL40Q9NQ50 206 aaKnown RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 KLHL11Q9NVR0 708 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 TEKT2Q9UIF3 430 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 RASAL2Q9UJF2 1139 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 TRPC5Q9UL62 973 aaPredicted RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 ZNF131P52739 623 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 TSTA3Q13630 321 aaPredicted RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 TAF11Q15544 211 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 HP1BP3Q5SSJ5 553 aaPredicted RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 C11orf74Q86VG3 221 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 MPHOSPH8Q99549 860 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 SH3GL3Q99963 347 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 PLCB1Q9NQ66 1216 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 CHRAC1Q9NRG0 131 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 CEP126Q9P2H0 1117 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 PTPDC1A2A3K4 754 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 EBAG9O00559 213 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 KRT75O95678 551 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 KRT8P05787 483 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 SKIP12755 728 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 CCND1P24385 295 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 KIF11P52732 1056 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 SPAG1Q07617 926 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 SNX1Q13596 522 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 CTTNQ14247 550 aaKnown RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 CCDC85BQ15834 202 aaPredicted RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 ANKRD45Q5TZF3 282 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 THOC7Q6I9Y2 204 aaKnown RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 PPP4R3AQ6IN85 833 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 RCSD1Q6JBY9 416 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 PPP1R21Q6ZMI0 780 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 DENND6AQ8IWF6 608 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 CCDC94Q9BW85 323 aaPredicted RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 API5Q9BZZ5 524 aaKnown RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 ZCWPW1Q9H0M4 648 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 CTNNA3Q9UI47 895 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 PARP3Q9Y6F1 533 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 hCG_2014768A0A024R1R8 64 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 KRT14P02533 472 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 SPARCP09486 303 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 ANKS6Q68DC2 871 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 NXNQ6DKJ4 435 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 VPS36Q86VN1 386 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 UBXN4Q92575 508 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 VPS18Q9P253 973 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 IQSEC3Q9UPP2 1182 aaPredicted RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 ACTN1P12814 892 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 CASTP20810 708 aaKnown RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 PRPF4BQ13523 1007 aaKnown RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 SKOR2Q2VWA4 1001 aaPredicted RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 CEP85LQ5SZL2 805 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 DUSP27Q5VZP5 1158 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 TSHZ2Q9NRE2 1034 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 DBNLQ9UJU6 430 aaKnown RBP3.93□□□□□ -1.78
ATRX-212ENST00000623706 FAM50BQ9Y247 325 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 SFI1A8K8P3 1242 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 CAPN1P07384 714 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 RAB15P59190 212 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 GUCY1B3Q02153 619 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 PDE3BQ13370 1112 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 CCDC57Q2TAC2 916 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 ARL13BQ3SXY8 428 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 LARP1Q6PKG0 1096 aaKnown RBP3.92□□□□□ -1.78
ATRX-212ENST00000623706 IQCA1Q86XH1 822 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 TMTC2Q8N394 836 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 RGS22Q8NE09 1264 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 RRP36Q96EU6 259 aaKnown RBP3.92□□□□□ -1.78
ATRX-212ENST00000623706 UTP14AQ9BVJ6 771 aaKnown RBP3.92□□□□□ -1.78
ATRX-212ENST00000623706 KLHL31Q9H511 634 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 SSX2IPQ9Y2D8 614 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 USO1O60763 962 aaKnown RBP3.92□□□□□ -1.78
ATRX-212ENST00000623706 LMNB1P20700 586 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 PHBP35232 272 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 NRG3P56975 720 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 NUTM2GQ5VZR2 741 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 CCDC121Q6ZUS5 278 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 MCF2L2Q86YR7 1114 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 LSM14AQ8ND56 463 aaKnown RBP3.92□□□□□ -1.78
ATRX-212ENST00000623706 CATSPER2Q96P56 530 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 GPR101Q96P66 508 aaPredicted RBP3.92□□□□□ -1.78
ATRX-212ENST00000623706 HELLSQ9NRZ9 838 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 DDX28Q9NUL7 540 aaKnown RBP3.92□□□□□ -1.78
ATRX-212ENST00000623706 ATP8A1Q9Y2Q0 1164 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 GTPBP10A4D1E9 387 aaKnown RBP3.92□□□□□ -1.78
ATRX-212ENST00000623706 ATP2A1O14983 1001 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 WDR46O15213 610 aaKnown RBP3.92□□□□□ -1.78
ATRX-212ENST00000623706 APOA4P06727 396 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 DMPKQ09013 629 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 UAP1Q16222 522 aaPredicted RBP3.92□□□□□ -1.78
ATRX-212ENST00000623706 HIF1AQ16665 826 aa3.92□□□□□ -1.78
ATRX-212ENST00000623706 KRT71Q3SY84 523 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms