RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 BICD2Q8TD16 824 aa10.69□□□□□ -0.7
HDAC9-229ENST00000622668 BRIP1Q9BX63 1249 aa10.69□□□□□ -0.7
HDAC9-229ENST00000622668 BCAMP50895 628 aa10.69□□□□□ -0.7
HDAC9-229ENST00000622668 ITPK1Q13572 414 aa10.69□□□□□ -0.7
HDAC9-229ENST00000622668 SLC12A7Q9Y666 1083 aa10.69□□□□□ -0.7
HDAC9-229ENST00000622668 GOLGA6L6A8MZA4 724 aa10.69□□□□□ -0.7
HDAC9-229ENST00000622668 GRAPQ13588 217 aa10.69□□□□□ -0.7
HDAC9-229ENST00000622668 MAPKAPK5Q8IW41 473 aa10.69□□□□□ -0.7
HDAC9-229ENST00000622668 GRAPLQ8TC17 118 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-229ENST00000622668 CARMIL3Q8ND23 1372 aa10.69□□□□□ -0.7
HDAC9-229ENST00000622668 MBD4O95243 580 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 RAB11FIP4Q86YS3 637 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 CCDC144CPQ8IYA2 1237 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 IRX3P78415 501 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-229ENST00000622668 TBC1D10BQ4KMP7 808 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-229ENST00000622668 TMEM67Q5HYA8 995 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 CEP85Q6P2H3 762 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 COL23A1Q86Y22 540 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-229ENST00000622668 DRC7Q8IY82 874 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 RLBP1P12271 317 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 DPEP1P16444 411 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 LEMD3Q9Y2U8 911 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 KDM2BQ8NHM5 1336 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 ARHGAP23Q9P227 1491 aa10.68□□□□□ -0.7
HDAC9-229ENST00000622668 CDKL5O76039 1030 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 MYCP01106 439 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-229ENST00000622668 CASTP20810 708 aaKnown RBP10.67□□□□□ -0.7
HDAC9-229ENST00000622668 DCAF15Q66K64 600 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 MICU3Q86XE3 530 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 SYNE4Q8N205 404 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 ESR2Q92731 530 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 MPHOSPH6Q99547 160 aaKnown RBP10.67□□□□□ -0.7
HDAC9-229ENST00000622668 SLIT1O75093 1534 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 ANKRD1Q15327 319 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 TNNI3KQ59H18 835 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 DDX11Q96FC9 970 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 TANGO6Q9C0B7 1094 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 NDUFB9Q9Y6M9 179 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 FPGT-TNNI3KV9GXZ4 949 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 CDK12Q9NYV4 1490 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-229ENST00000622668 CCDC196A0A1B0GTZ2 297 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 LRRC24Q50LG9 513 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 PLEKHF1Q96S99 279 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 PDRG1Q9NUG6 133 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-229ENST00000622668 NRXN1Q9ULB1 1477 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 MED14O60244 1454 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 IQCA1LA6NCM1 817 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 CEBPZQ03701 1054 aaKnown RBP10.67□□□□□ -0.7
HDAC9-229ENST00000622668 AOC3Q16853 763 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 OTUD7BQ6GQQ9 843 aa10.67□□□□□ -0.7
HDAC9-229ENST00000622668 PDE4CQ08493 712 aa10.66□□□□□ -0.7
HDAC9-229ENST00000622668 RC3H1Q5TC82 1133 aaKnown RBP10.66□□□□□ -0.7
HDAC9-229ENST00000622668 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
HDAC9-229ENST00000622668 KIF22Q14807 665 aa10.66□□□□□ -0.7
HDAC9-229ENST00000622668 PUS3Q9BZE2 481 aaKnown RBP10.66□□□□□ -0.7
HDAC9-229ENST00000622668 SH2D4AQ9H788 454 aa10.66□□□□□ -0.7
HDAC9-229ENST00000622668 CPDO75976 1380 aa10.66□□□□□ -0.7
HDAC9-229ENST00000622668 KIF13AQ9H1H9 1805 aa10.66□□□□□ -0.7
HDAC9-229ENST00000622668 PPFIA3O75145 1194 aa10.66□□□□□ -0.7
HDAC9-229ENST00000622668 KIF5BP33176 963 aa10.66□□□□□ -0.7
HDAC9-229ENST00000622668 SPATA5Q8NB90 893 aa10.66□□□□□ -0.7
HDAC9-229ENST00000622668 USP44Q9H0E7 712 aa10.66□□□□□ -0.7
HDAC9-229ENST00000622668 GZF1Q9H116 711 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-229ENST00000622668 SUPT20HL1Q3ZLR7 823 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 PRDM1O75626 825 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 TXLNAP40222 546 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 UBE4AQ14139 1066 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 PPP4R3BQ5MIZ7 849 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 BEND3Q5T5X7 828 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 TMEM87AQ8NBN3 555 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 PNMA6EA0A0J9YXQ4 647 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 GOLGA8AA7E2F4 631 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 GOLGA8BA8MQT2 603 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 USP17L8P0C7I0 530 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 CPXCR1Q8N123 301 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 SYAP1Q96A49 352 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-229ENST00000622668 PAGR1Q9BTK6 254 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 ARMT1Q9H993 441 aa10.65□□□□□ -0.7
HDAC9-229ENST00000622668 PRR5LQ6MZQ0 368 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 TRIM44Q96DX7 344 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-229ENST00000622668 PCDHB15Q9Y5E8 787 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 USP17L3A6NCW0 530 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 USP17L4A6NCW7 530 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 PDE8BO95263 885 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 ZAP70P43403 619 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 PDE1AP54750 535 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 USP17L1Q7RTZ2 530 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 ARMC9Q7Z3E5 817 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 C2orf69Q8N8R5 385 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 NCOA7Q8NI08 942 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 DLC1Q96QB1 1528 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 RNF113AO15541 343 aaKnown RBP10.64□□□□□ -0.71
HDAC9-229ENST00000622668 PDCP20941 246 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 TPM4P67936 248 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 MCMDC2Q4G0Z9 681 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 IFIT1BQ5T764 474 aaKnown RBP10.64□□□□□ -0.71
HDAC9-229ENST00000622668 GADL1Q6ZQY3 521 aa10.64□□□□□ -0.71
HDAC9-229ENST00000622668 CELF1Q92879 486 aaKnown RBP10.64□□□□□ -0.71
HDAC9-229ENST00000622668 ARHGEF10LQ9HCE6 1279 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms