RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 CPA1P15085 419 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 EIF2S2P20042 333 aaKnown RBP8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 CCDC144BQ3MJ40 725 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 CCDC144CPQ8IYA2 1237 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 OTUD6BQ8N6M0 293 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 CALR3Q96L12 384 aaKnown RBP8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 CBX8Q9HC52 389 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 ARFGAP3Q9NP61 516 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 GNL3LQ9NVN8 582 aaKnown RBP8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 CHPF2Q9P2E5 772 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 CEMIPQ8WUJ3 1361 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 ANKRD33BA6NCL7 494 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 TMCO5BA8MYB1 307 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 SRGAP3O43295 1099 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 CCP110O43303 1012 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 LARGE1O95461 756 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 MNAT1P51948 309 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 GSDMDP57764 484 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 POTEHQ6S545 545 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 LUZP1Q86V48 1076 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 GPR161Q8N6U8 529 aaKnown RBP8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 MIEF2Q96C03 454 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 TTC14Q96N46 770 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 NUP62CLQ9H1M0 184 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 LGR6Q9HBX8 967 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 DNAI1Q9UI46 699 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 TBX22Q9Y458 520 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 RGPD2P0DJD1 1756 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 ADCY9O60503 1353 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 ANKARQ7Z5J8 1434 aa8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 NPHP1O15259 732 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 PPFIA4O75335 1185 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 SEC31AO94979 1220 aaKnown RBP8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 KCNA6P17658 529 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 AK2P54819 239 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 EIF4A1P60842 406 aaKnown RBP8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 BEND3Q5T5X7 828 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 TTLL5Q6EMB2 1281 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 GBP6Q6ZN66 633 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 RBM43Q6ZSC3 357 aaKnown RBP8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 RUFY3Q7L099 469 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 FAXDC2Q96IV6 333 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 DNAJC5Q9H3Z4 198 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 ZCCHC17Q9NP64 241 aaKnown RBP8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 SPG7Q9UQ90 795 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 EID1Q9Y6B2 187 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 NFAT5O94916 1531 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 CCDC69A6NI79 296 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 CTAGE5O15320 804 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 ERLIN2O94905 339 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 F13A1P00488 732 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 NEDD9Q14511 834 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 TPRNQ4KMQ1 711 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 ABTB2Q8N961 1025 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 PXDNQ92626 1479 aa8.68□□□□□ -1.02
TRIM49B-202ENST00000622138 PI4KAP2A4QPH2 592 aa8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 RAB11FIP3O75154 756 aa8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 EIF3JO75822 258 aaKnown RBP8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 ELF1P32519 619 aa8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 ANO6Q4KMQ2 910 aa8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 CWC27Q6UX04 472 aaKnown RBP8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 MICALL1Q8N3F8 863 aa8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 PI4KAP1Q8N8J0 262 aa8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 LRRN4CLQ8ND94 238 aa8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 DDX11Q96FC9 970 aa8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 FUT8Q9BYC5 575 aa8.67□□□□□ -1.02
TRIM49B-202ENST00000622138 H3BQF6 201 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 MPHOSPH10O00566 681 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 MAP2K7O14733 419 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 FIBPO43427 364 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 HMGB1P09429 215 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 PTH1RQ03431 593 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 ST3GAL1Q11201 340 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 COL9A3Q14050 684 aaPredicted RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 PROSER3Q2NL68 480 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 LRRFIP1Q32MZ4 808 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 TEX11Q8IYF3 940 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 CCDC34Q96HJ3 373 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 DDX19AQ9NUU7 478 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 BABAM1Q9NWV8 329 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 USP42Q9H9J4 1324 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 SETD1BQ9UPS6 1966 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 CCDC151A5D8V7 595 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 EPB41L2O43491 1005 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 NRDCO43847 1150 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 GCFC2P16383 781 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 SCP2P22307 547 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 HNRNPH1P31943 449 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 DDR1Q08345 913 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 BRD3Q15059 726 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 DDX54Q8TDD1 881 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 PPP1R13BQ96KQ4 1090 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 PA2G4Q9UQ80 394 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 CHD2O14647 1828 aaKnown RBP8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 LMO7Q8WWI1 1683 aa8.66□□□□□ -1.02
TRIM49B-202ENST00000622138 STX6O43752 255 aa8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 SYT1P21579 422 aa8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 EVCP57679 992 aa8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms