RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MCM6Q14566 821 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 CAMK4Q16566 473 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 FAM98CQ17RN3 349 aaKnown RBP8.12□□□□□ -1.11
COLCA1-205ENST00000620864 ATP6V1AP38606 617 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 GPR161Q8N6U8 529 aaKnown RBP8.12□□□□□ -1.11
COLCA1-205ENST00000620864 FAM200AQ8TCP9 573 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 TRMT1Q9NXH9 659 aaKnown RBP8.12□□□□□ -1.11
COLCA1-205ENST00000620864 KIF21AQ7Z4S6 1674 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 CFAP157Q5JU67 520 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 CCDC102BQ68D86 513 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 CSRNP2Q9H175 543 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 ODF2LQ9ULJ1 636 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 TSPOAP1O95153 1857 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 SPON1Q9HCB6 807 aa8.12□□□□□ -1.11
COLCA1-205ENST00000620864 MACROD2A1Z1Q3 448 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 AKR1B10O60218 316 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 VIMP08670 466 aaKnown RBP8.11□□□□□ -1.11
COLCA1-205ENST00000620864 ERO1AQ96HE7 468 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 HMG20BQ9P0W2 317 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 VPS18Q9P253 973 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 PSDA5PKW4 1024 aaPredicted RBP8.11□□□□□ -1.11
COLCA1-205ENST00000620864 PUS7Q96PZ0 661 aaKnown RBP8.11□□□□□ -1.11
COLCA1-205ENST00000620864 HAUS8Q9BT25 410 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 PRPF4BQ13523 1007 aaKnown RBP8.11□□□□□ -1.11
COLCA1-205ENST00000620864 KIF21BO75037 1637 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 IGHMBP2P38935 993 aaKnown RBP8.11□□□□□ -1.11
COLCA1-205ENST00000620864 CCDC96Q2M329 555 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 TAOK1Q7L7X3 1001 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 SLC17A8Q8NDX2 589 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 NOB1Q9ULX3 412 aaKnown RBP8.11□□□□□ -1.11
COLCA1-205ENST00000620864 SKILP12757 684 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 RNF10Q8N5U6 811 aaKnown RBP8.11□□□□□ -1.11
COLCA1-205ENST00000620864 FSIP1Q8NA03 581 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 CPLX3Q8WVH0 158 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 GBP5Q96PP8 586 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 SPINK5Q9NQ38 1064 aaPredicted RBP8.11□□□□□ -1.11
COLCA1-205ENST00000620864 ABCA10Q8WWZ4 1543 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 TRAF1Q13077 416 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 RUFY4Q6ZNE9 571 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 TNPO1Q92973 898 aaKnown RBP8.11□□□□□ -1.11
COLCA1-205ENST00000620864 ATF5Q9Y2D1 282 aaPredicted RBP8.11□□□□□ -1.11
COLCA1-205ENST00000620864 CCDC61Q9Y6R9 512 aa8.11□□□□□ -1.11
COLCA1-205ENST00000620864 NAA30Q147X3 362 aaPredicted RBP8.1□□□□□ -1.11
COLCA1-205ENST00000620864 CEP85LQ5SZL2 805 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 CCDC26Q8TAB7 109 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 KIF1BPQ96EK5 621 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 PLCB1Q9NQ66 1216 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 CCDC62Q6P9F0 684 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 MSANTD4Q8NCY6 345 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 BTG4Q9NY30 223 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 C11orf95C9JLR9 678 aaPredicted RBP8.1□□□□□ -1.11
COLCA1-205ENST00000620864 PHLDB3Q6NSJ2 640 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 TCP11L2Q8N4U5 519 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 SPATS2LQ9NUQ6 558 aaKnown RBP8.1□□□□□ -1.11
COLCA1-205ENST00000620864 SEPT10Q9P0V9 454 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 LRP2BPQ9P2M1 347 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 PPP1R2P41236 205 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 UBASH3AP57075 661 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 NLRP5P59047 1200 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 SSRP1Q08945 709 aaKnown RBP8.1□□□□□ -1.11
COLCA1-205ENST00000620864 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.1□□□□□ -1.11
COLCA1-205ENST00000620864 CUL5Q93034 780 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 TXNDC16Q9P2K2 825 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 SNX16P57768 344 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 RBM26Q5T8P6 1007 aaKnown RBP8.1□□□□□ -1.11
COLCA1-205ENST00000620864 GJA3Q9Y6H8 435 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 MAP3K7CLP57077 242 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 TAF7Q15545 349 aaPredicted RBP8.1□□□□□ -1.11
COLCA1-205ENST00000620864 PRR16Q569H4 304 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 WDR7Q9Y4E6 1490 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 ATP2C2O75185 946 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 KRBA2Q6ZNG9 492 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 SLC12A5Q9H2X9 1139 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 C19orf44Q9H6X5 657 aa8.1□□□□□ -1.11
COLCA1-205ENST00000620864 ANKRD24Q8TF21 1146 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 ABCC11Q96J66 1382 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 OTUD7BQ6GQQ9 843 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 AACSQ86V21 672 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 VPS52Q8N1B4 723 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 MPNDQ8N594 471 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 ZSCAN23Q3MJ62 389 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 APBB1IPQ7Z5R6 666 aaPredicted RBP8.09□□□□□ -1.11
COLCA1-205ENST00000620864 ABCF2Q9UG63 623 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 CCDC194A0A1B0GVG4 234 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 N4BP3O15049 544 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 STX6O43752 255 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 TRIM14Q14142 442 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 SELENOSQ9BQE4 189 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 RAD50Q92878 1312 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 MX1P20591 662 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 FKBP4Q02790 459 aaKnown RBP eCLIP8.09□□□□□ -1.11
COLCA1-205ENST00000620864 CALCOCO2Q13137 446 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 EHBP1L1Q8N3D4 1523 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 TOP2BQ02880 1626 aa8.09□□□□□ -1.11
COLCA1-205ENST00000620864 PPFIA4O75335 1185 aa8.09□□□□□ -1.12
COLCA1-205ENST00000620864 POLR3DP05423 398 aaPredicted RBP8.09□□□□□ -1.12
COLCA1-205ENST00000620864 ALDH1L2Q3SY69 923 aa8.09□□□□□ -1.12
COLCA1-205ENST00000620864 DNAI1Q9UI46 699 aa8.09□□□□□ -1.12
COLCA1-205ENST00000620864 ACTN4O43707 911 aaKnown RBP8.08□□□□□ -1.12
COLCA1-205ENST00000620864 IQCA1Q86XH1 822 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms