RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 XAGE2Q96GT9 111 aa11.6□□□□□ -0.55
CDH23-213ENST00000619887 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
CDH23-213ENST00000619887 MAP7D2Q96T17 732 aa11.6□□□□□ -0.55
CDH23-213ENST00000619887 SLC3A2P08195 630 aaKnown RBP11.6□□□□□ -0.55
CDH23-213ENST00000619887 CCDC152Q4G0S7 254 aa11.6□□□□□ -0.55
CDH23-213ENST00000619887 EPHA10Q5JZY3 1008 aa11.6□□□□□ -0.55
CDH23-213ENST00000619887 MTERF4Q7Z6M4 381 aaKnown RBP11.6□□□□□ -0.55
CDH23-213ENST00000619887 SPC24Q8NBT2 197 aa11.6□□□□□ -0.55
CDH23-213ENST00000619887 GTF3C6Q969F1 213 aa11.6□□□□□ -0.55
CDH23-213ENST00000619887 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
CDH23-213ENST00000619887 ZDHHC9Q9Y397 364 aa11.6□□□□□ -0.55
CDH23-213ENST00000619887 KLF18A0A0U1RQI7 1052 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 PTPDC1A2A3K4 754 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 RABL6Q3YEC7 729 aaPredicted RBP11.59□□□□□ -0.55
CDH23-213ENST00000619887 TMEM87AQ8NBN3 555 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 RNF41Q9H4P4 317 aaPredicted RBP11.59□□□□□ -0.55
CDH23-213ENST00000619887 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 TPD52L1Q16890 204 aaPredicted RBP11.59□□□□□ -0.55
CDH23-213ENST00000619887 OLFM4Q6UX06 510 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 CCDC196A0A1B0GTZ2 297 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 APOBRQ0VD83 1088 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 PDIA6Q15084 440 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 ZBTB38Q8NAP3 1195 aaPredicted RBP11.59□□□□□ -0.55
CDH23-213ENST00000619887 SMARCC1Q92922 1105 aaPredicted RBP11.59□□□□□ -0.55
CDH23-213ENST00000619887 UBAC1Q9BSL1 405 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 DACT1Q9NYF0 836 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 PRC1O43663 620 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 PDE8AO60658 829 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 SLC9C2Q5TAH2 1124 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
CDH23-213ENST00000619887 GUCY1B3Q02153 619 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 NAA16Q6N069 864 aaPredicted RBP11.58□□□□□ -0.56
CDH23-213ENST00000619887 FSIP1Q8NA03 581 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 CPDO75976 1380 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 ITGA6P23229 1130 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 PDE4CQ08493 712 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 DDB1Q16531 1140 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 STX1AQ16623 288 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 NGLY1Q96IV0 654 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 NOL7Q9UMY1 257 aaKnown RBP11.58□□□□□ -0.56
CDH23-213ENST00000619887 MST1RQ04912 1400 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 LTN1O94822 1766 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 ZMYM1Q5SVZ6 1142 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 ZNF589Q86UQ0 364 aaPredicted RBP11.58□□□□□ -0.56
CDH23-213ENST00000619887 CCAR1Q8IX12 1150 aaKnown RBP11.58□□□□□ -0.56
CDH23-213ENST00000619887 UTP14AQ9BVJ6 771 aaKnown RBP11.58□□□□□ -0.56
CDH23-213ENST00000619887 RAI14Q9P0K7 980 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
CDH23-213ENST00000619887 METAP2P50579 478 aaKnown RBP eCLIP11.57□□□□□ -0.56
CDH23-213ENST00000619887 CDC37L1Q7L3B6 337 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.57□□□□□ -0.56
CDH23-213ENST00000619887 CNNM2Q9H8M5 875 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 MAP3K15Q6ZN16 1313 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 SLIT3O75094 1523 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 GOLGA8AA7E2F4 631 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 ZNF165P49910 485 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 PARP10Q53GL7 1025 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 CAVIN4Q5BKX8 364 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 KCNG4Q8TDN1 519 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 TYRO3Q06418 890 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 SLC12A7Q9Y666 1083 aa11.57□□□□□ -0.56
CDH23-213ENST00000619887 IFIT3O14879 490 aaKnown RBP11.56□□□□□ -0.56
CDH23-213ENST00000619887 LRRC24Q50LG9 513 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 GIGYF2Q6Y7W6 1299 aaKnown RBP11.56□□□□□ -0.56
CDH23-213ENST00000619887 ALDH8A1Q9H2A2 487 aaPredicted RBP11.56□□□□□ -0.56
CDH23-213ENST00000619887 ABCF2Q9UG63 623 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 FAM208AQ9UK61 1670 aaKnown RBP11.56□□□□□ -0.56
CDH23-213ENST00000619887 NWD1Q149M9 1564 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
CDH23-213ENST00000619887 PFKFB2O60825 505 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 KRT23Q9C075 422 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 ELP1O95163 1332 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 SMTNL1A8MU46 457 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 E7EWF7 191 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 GNAT2P19087 354 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 ATP6V1AP38606 617 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 PUM3Q15397 648 aaKnown RBP11.56□□□□□ -0.56
CDH23-213ENST00000619887 TMEM67Q5HYA8 995 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 LEO1Q8WVC0 666 aaPredicted RBP11.56□□□□□ -0.56
CDH23-213ENST00000619887 ZNF274Q96GC6 653 aaPredicted RBP11.56□□□□□ -0.56
CDH23-213ENST00000619887 FAM13BQ9NYF5 915 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 IARSP41252 1262 aaKnown RBP11.56□□□□□ -0.56
CDH23-213ENST00000619887 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 BRAPQ7Z569 592 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 CHAMP1Q96JM3 812 aa11.56□□□□□ -0.56
CDH23-213ENST00000619887 SEC62Q99442 399 aaKnown RBP11.56□□□□□ -0.56
CDH23-213ENST00000619887 HSPD1P10809 573 aaKnown RBP11.55□□□□□ -0.56
CDH23-213ENST00000619887 CTSWP56202 376 aa11.55□□□□□ -0.56
CDH23-213ENST00000619887 MPNDQ8N594 471 aa11.55□□□□□ -0.56
CDH23-213ENST00000619887 GPAA1O43292 621 aa11.55□□□□□ -0.56
CDH23-213ENST00000619887 OFD1O75665 1012 aa11.55□□□□□ -0.56
CDH23-213ENST00000619887 LARGE1O95461 756 aa11.55□□□□□ -0.56
CDH23-213ENST00000619887 CYP21A2P08686 494 aa11.55□□□□□ -0.56
CDH23-213ENST00000619887 MRPS27Q92552 414 aaKnown RBP11.55□□□□□ -0.56
CDH23-213ENST00000619887 KDM6AO15550 1401 aaPredicted RBP11.55□□□□□ -0.56
CDH23-213ENST00000619887 MEGF6O75095 1541 aa11.55□□□□□ -0.56
CDH23-213ENST00000619887 ZBTB43O43298 467 aa11.55□□□□□ -0.56
CDH23-213ENST00000619887 SSRP1Q08945 709 aaKnown RBP11.55□□□□□ -0.56
CDH23-213ENST00000619887 MFSD6Q6ZSS7 791 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms