RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 ONECUT3O60422 494 aaPredicted RBP24.09■■□□□ 1.45
MMP28-207ENST00000619655 BAG4O95429 457 aaKnown RBP24.09■■□□□ 1.45
MMP28-207ENST00000619655 OSBP2Q969R2 916 aa24.09■■□□□ 1.45
MMP28-207ENST00000619655 ZDHHC9Q9Y397 364 aa24.09■■□□□ 1.45
MMP28-207ENST00000619655 SCN7AQ01118 1682 aa24.09■■□□□ 1.45
MMP28-207ENST00000619655 ABCC12Q96J65 1359 aa24.09■■□□□ 1.45
MMP28-207ENST00000619655 CCDC24Q8N4L8 307 aa24.09■■□□□ 1.45
MMP28-207ENST00000619655 DTNBO60941 627 aa24.08■■□□□ 1.45
MMP28-207ENST00000619655 CYP21A2P08686 494 aa24.08■■□□□ 1.45
MMP28-207ENST00000619655 LRRFIP1Q32MZ4 808 aaKnown RBP24.08■■□□□ 1.45
MMP28-207ENST00000619655 SETDB2Q96T68 719 aa24.08■■□□□ 1.45
MMP28-207ENST00000619655 SLC5A1P13866 664 aa24.07■■□□□ 1.44
MMP28-207ENST00000619655 ARHGEF1Q92888 912 aaKnown RBP24.07■■□□□ 1.44
MMP28-207ENST00000619655 HSPD1P10809 573 aaKnown RBP24.07■■□□□ 1.44
MMP28-207ENST00000619655 FGFR2P21802 821 aa24.07■■□□□ 1.44
MMP28-207ENST00000619655 AKAP11Q9UKA4 1901 aa24.07■■□□□ 1.44
MMP28-207ENST00000619655 COL4A1P02462 1669 aa24.06■■□□□ 1.44
MMP28-207ENST00000619655 RPS6KB1P23443 525 aa24.06■■□□□ 1.44
MMP28-207ENST00000619655 CCDC83Q8IWF9 413 aa24.06■■□□□ 1.44
MMP28-207ENST00000619655 LY75O60449 1722 aa24.06■■□□□ 1.44
MMP28-207ENST00000619655 TAF1LQ8IZX4 1826 aa24.06■■□□□ 1.44
MMP28-207ENST00000619655 TAF1P21675 1872 aa24.06■■□□□ 1.44
MMP28-207ENST00000619655 MCTP1Q6DN14 999 aa24.06■■□□□ 1.44
MMP28-207ENST00000619655 NBPF5PQ86XG9 351 aaPredicted RBP24.06■■□□□ 1.44
MMP28-207ENST00000619655 CDC5LQ99459 802 aaKnown RBP24.06■■□□□ 1.44
MMP28-207ENST00000619655 GOLGA6L22H0YM25 854 aa24.05■■□□□ 1.44
MMP28-207ENST00000619655 IDH1O75874 414 aaKnown RBP24.05■■□□□ 1.44
MMP28-207ENST00000619655 CHRNDQ07001 517 aa24.05■■□□□ 1.44
MMP28-207ENST00000619655 RTL9Q8NET4 1388 aa24.05■■□□□ 1.44
MMP28-207ENST00000619655 ZFYP08048 801 aaPredicted RBP24.05■■□□□ 1.44
MMP28-207ENST00000619655 KRT32Q14532 448 aa24.05■■□□□ 1.44
MMP28-207ENST00000619655 CHAMP1Q96JM3 812 aa24.05■■□□□ 1.44
MMP28-207ENST00000619655 NEK1Q96PY6 1258 aa24.05■■□□□ 1.44
MMP28-207ENST00000619655 DSCC1Q9BVC3 393 aa24.05■■□□□ 1.44
MMP28-207ENST00000619655 NPHP1O15259 732 aa24.04■■□□□ 1.44
MMP28-207ENST00000619655 RFC4P35249 363 aa24.04■■□□□ 1.44
MMP28-207ENST00000619655 TSGA10IPQ3SY00 556 aa24.04■■□□□ 1.44
MMP28-207ENST00000619655 FAM196AQ6ZSG2 479 aa24.04■■□□□ 1.44
MMP28-207ENST00000619655 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.04■■□□□ 1.44
MMP28-207ENST00000619655 PUS7LQ9H0K6 701 aaKnown RBP24.04■■□□□ 1.44
MMP28-207ENST00000619655 TPCN1Q9ULQ1 816 aa24.04■■□□□ 1.44
MMP28-207ENST00000619655 A0A0G2JLW4 131 aa24.04■■□□□ 1.44
MMP28-207ENST00000619655 ME3Q16798 604 aa24.04■■□□□ 1.44
MMP28-207ENST00000619655 TICAM2Q86XR7 235 aa24.04■■□□□ 1.44
MMP28-207ENST00000619655 NECAB1Q8N987 351 aa24.04■■□□□ 1.44
MMP28-207ENST00000619655 BCL11BQ9C0K0 894 aaPredicted RBP24.04■■□□□ 1.44
MMP28-207ENST00000619655 PIH1D3Q9NQM4 214 aaKnown RBP24.04■■□□□ 1.44
MMP28-207ENST00000619655 LRRC4BQ9NT99 713 aa24.04■■□□□ 1.44
MMP28-207ENST00000619655 CASZ1Q86V15 1759 aa24.03■■□□□ 1.44
MMP28-207ENST00000619655 MYH7P12883 1935 aa24.03■■□□□ 1.44
MMP28-207ENST00000619655 ARID4AP29374 1257 aaPredicted RBP24.03■■□□□ 1.44
MMP28-207ENST00000619655 SLC9C2Q5TAH2 1124 aa24.03■■□□□ 1.44
MMP28-207ENST00000619655 ANKRD18AQ8IVF6 992 aa24.03■■□□□ 1.44
MMP28-207ENST00000619655 ZNF512BQ96KM6 892 aaPredicted RBP24.03■■□□□ 1.44
MMP28-207ENST00000619655 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.03■■□□□ 1.44
MMP28-207ENST00000619655 C4BP0C0L5 1744 aa24.03■■□□□ 1.44
MMP28-207ENST00000619655 MYO5AQ9Y4I1 1855 aaKnown RBP24.03■■□□□ 1.44
MMP28-207ENST00000619655 UQCRFS1P1P0C7P4 283 aa24.02■■□□□ 1.44
MMP28-207ENST00000619655 NYXQ9GZU5 481 aa24.02■■□□□ 1.44
MMP28-207ENST00000619655 TTF1Q15361 905 aaPredicted RBP24.02■■□□□ 1.44
MMP28-207ENST00000619655 TRAPPC3LQ5T215 181 aa24.02■■□□□ 1.44
MMP28-207ENST00000619655 CLEC17AQ6ZS10 378 aa24.02■■□□□ 1.44
MMP28-207ENST00000619655 APPBP2Q92624 585 aa24.02■■□□□ 1.44
MMP28-207ENST00000619655 SMC3Q9UQE7 1217 aa24.02■■□□□ 1.44
MMP28-207ENST00000619655 ARAP2Q8WZ64 1704 aa24.02■■□□□ 1.44
MMP28-207ENST00000619655 BCAMP50895 628 aa24.01■■□□□ 1.43
MMP28-207ENST00000619655 TTLL5Q6EMB2 1281 aa24.01■■□□□ 1.43
MMP28-207ENST00000619655 ZSCAN31Q96LW9 406 aaPredicted RBP24.01■■□□□ 1.43
MMP28-207ENST00000619655 SF3B3Q15393 1217 aaKnown RBP24.01■■□□□ 1.43
MMP28-207ENST00000619655 FOXD4L6Q3SYB3 417 aaPredicted RBP24.01■■□□□ 1.43
MMP28-207ENST00000619655 FOXD4L3Q6VB84 417 aaPredicted RBP24.01■■□□□ 1.43
MMP28-207ENST00000619655 STOX1Q6ZVD7 989 aa24.01■■□□□ 1.43
MMP28-207ENST00000619655 SPATA5Q8NB90 893 aa24.01■■□□□ 1.43
MMP28-207ENST00000619655 SH2B1Q9NRF2 756 aaPredicted RBP24.01■■□□□ 1.43
MMP28-207ENST00000619655 BRD1O95696 1058 aa24■■□□□ 1.43
MMP28-207ENST00000619655 RASGRF1Q13972 1273 aa24■■□□□ 1.43
MMP28-207ENST00000619655 TOB2Q14106 344 aaPredicted RBP24■■□□□ 1.43
MMP28-207ENST00000619655 CELF1Q92879 486 aaKnown RBP24■■□□□ 1.43
MMP28-207ENST00000619655 LRRC2Q9BYS8 371 aa24■■□□□ 1.43
MMP28-207ENST00000619655 TRIM37O94972 964 aa23.99■■□□□ 1.43
MMP28-207ENST00000619655 STK3Q13188 491 aa23.99■■□□□ 1.43
MMP28-207ENST00000619655 ANKRD1Q15327 319 aa23.99■■□□□ 1.43
MMP28-207ENST00000619655 TPTE2Q6XPS3 522 aa23.99■■□□□ 1.43
MMP28-207ENST00000619655 NLRP3Q96P20 1036 aa23.99■■□□□ 1.43
MMP28-207ENST00000619655 WTIPA6NIX2 430 aaPredicted RBP23.99■■□□□ 1.43
MMP28-207ENST00000619655 GPAA1O43292 621 aa23.99■■□□□ 1.43
MMP28-207ENST00000619655 ADD2P35612 726 aa23.99■■□□□ 1.43
MMP28-207ENST00000619655 ZSCAN25Q6NSZ9 544 aa23.99■■□□□ 1.43
MMP28-207ENST00000619655 KRT27Q7Z3Y8 459 aa23.99■■□□□ 1.43
MMP28-207ENST00000619655 IQSEC3Q9UPP2 1182 aaPredicted RBP23.99■■□□□ 1.43
MMP28-207ENST00000619655 C4AP0C0L4 1744 aa23.98■■□□□ 1.43
MMP28-207ENST00000619655 FGD1P98174 961 aa23.98■■□□□ 1.43
MMP28-207ENST00000619655 WWC3Q9ULE0 1092 aa23.98■■□□□ 1.43
MMP28-207ENST00000619655 RGL2O15211 777 aa23.98■■□□□ 1.43
MMP28-207ENST00000619655 HAND2P61296 217 aa23.98■■□□□ 1.43
MMP28-207ENST00000619655 ST3GAL1Q11201 340 aa23.98■■□□□ 1.43
MMP28-207ENST00000619655 Q6ZUG5 572 aa23.98■■□□□ 1.43
MMP28-207ENST00000619655 ZNF532Q9HCE3 1301 aa23.97■■□□□ 1.43
MMP28-207ENST00000619655 BRWD3Q6RI45 1802 aa23.97■■□□□ 1.43
MMP28-207ENST00000619655 GJB2P29033 226 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms