RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 RABEP1Q15276 862 aa33.58■■■□□ 2.97
BRF1-221ENST00000619151 CD2APQ9Y5K6 639 aa33.58■■■□□ 2.97
BRF1-221ENST00000619151 TAF5LO75529 589 aa33.57■■■□□ 2.96
BRF1-221ENST00000619151 KIF2CQ99661 725 aa33.57■■■□□ 2.96
BRF1-221ENST00000619151 SNRKQ9NRH2 765 aa33.57■■■□□ 2.96
BRF1-221ENST00000619151 IL25Q9H293 177 aa33.56■■■□□ 2.96
BRF1-221ENST00000619151 NDUFB9Q9Y6M9 179 aa33.56■■■□□ 2.96
BRF1-221ENST00000619151 SRGNP10124 158 aa33.55■■■□□ 2.96
BRF1-221ENST00000619151 ARID4AP29374 1257 aaPredicted RBP33.55■■■□□ 2.96
BRF1-221ENST00000619151 HOXA10P31260 410 aaPredicted RBP33.55■■■□□ 2.96
BRF1-221ENST00000619151 ANAPC15P60006 121 aa33.55■■■□□ 2.96
BRF1-221ENST00000619151 FKBP4Q02790 459 aaKnown RBP eCLIP33.55■■■□□ 2.96
BRF1-221ENST00000619151 CCDC102BQ68D86 513 aa33.55■■■□□ 2.96
BRF1-221ENST00000619151 ERICH6Q7L0X2 663 aa33.55■■■□□ 2.96
BRF1-221ENST00000619151 ANKRD2Q9GZV1 360 aa33.55■■■□□ 2.96
BRF1-221ENST00000619151 MINPP1Q9UNW1 487 aa33.55■■■□□ 2.96
BRF1-221ENST00000619151 A0A1B0GUL6 1792 aa33.55■■■□□ 2.96
BRF1-221ENST00000619151 COL4A1P02462 1669 aa33.55■■■□□ 2.96
BRF1-221ENST00000619151 TGFB2P61812 414 aa33.54■■■□□ 2.96
BRF1-221ENST00000619151 UBE4AQ14139 1066 aa33.54■■■□□ 2.96
BRF1-221ENST00000619151 RPGRQ92834 1020 aaKnown RBP33.54■■■□□ 2.96
BRF1-221ENST00000619151 LSG1Q9H089 658 aaKnown RBP33.54■■■□□ 2.96
BRF1-221ENST00000619151 GRAPQ13588 217 aa33.53■■■□□ 2.96
BRF1-221ENST00000619151 HSCBQ8IWL3 235 aa33.53■■■□□ 2.96
BRF1-221ENST00000619151 GRAPLQ8TC17 118 aaPredicted RBP33.53■■■□□ 2.96
BRF1-221ENST00000619151 FAM227BQ96M60 508 aa33.53■■■□□ 2.96
BRF1-221ENST00000619151 H0YIN7 160 aa33.53■■■□□ 2.96
BRF1-221ENST00000619151 SNX21Q969T3 373 aa33.53■■■□□ 2.96
BRF1-221ENST00000619151 NPR1P16066 1061 aa33.52■■■□□ 2.96
BRF1-221ENST00000619151 TTF1Q15361 905 aaPredicted RBP33.52■■■□□ 2.96
BRF1-221ENST00000619151 C2CD5Q86YS7 1000 aa33.52■■■□□ 2.96
BRF1-221ENST00000619151 TAF1P21675 1872 aa33.51■■■□□ 2.96
BRF1-221ENST00000619151 MED23Q9ULK4 1368 aa33.51■■■□□ 2.96
BRF1-221ENST00000619151 A0A0D9SFI3 127 aa33.51■■■□□ 2.95
BRF1-221ENST00000619151 PHKA1P46020 1223 aa33.51■■■□□ 2.95
BRF1-221ENST00000619151 MCAMP43121 646 aa33.5■■■□□ 2.95
BRF1-221ENST00000619151 MASTLQ96GX5 879 aa33.5■■■□□ 2.95
BRF1-221ENST00000619151 RBM17Q96I25 401 aaKnown RBP33.5■■■□□ 2.95
BRF1-221ENST00000619151 CRAMP1Q96RY5 1269 aa33.5■■■□□ 2.95
BRF1-221ENST00000619151 TBC1D2Q9BYX2 928 aa33.5■■■□□ 2.95
BRF1-221ENST00000619151 ZFYP08048 801 aaPredicted RBP33.49■■■□□ 2.95
BRF1-221ENST00000619151 HSPA4P34932 840 aa33.49■■■□□ 2.95
BRF1-221ENST00000619151 ZAP70P43403 619 aa33.49■■■□□ 2.95
BRF1-221ENST00000619151 STYK1Q6J9G0 422 aa33.49■■■□□ 2.95
BRF1-221ENST00000619151 CCDC171Q6TFL3 1326 aa33.49■■■□□ 2.95
BRF1-221ENST00000619151 SCARF1Q14162 830 aa33.48■■■□□ 2.95
BRF1-221ENST00000619151 IL27Q8NEV9 243 aa33.48■■■□□ 2.95
BRF1-221ENST00000619151 HELLSQ9NRZ9 838 aa33.48■■■□□ 2.95
BRF1-221ENST00000619151 KCNJ4P48050 445 aa33.48■■■□□ 2.95
BRF1-221ENST00000619151 MCMDC2Q4G0Z9 681 aa33.48■■■□□ 2.95
BRF1-221ENST00000619151 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.48■■■□□ 2.951e-6■■■■□ 26.5
BRF1-221ENST00000619151 AKAP11Q9UKA4 1901 aa33.47■■■□□ 2.95
BRF1-221ENST00000619151 RNF113AO15541 343 aaKnown RBP33.47■■■□□ 2.95
BRF1-221ENST00000619151 CHRNA5P30532 468 aa33.47■■■□□ 2.95
BRF1-221ENST00000619151 ZSCAN25Q6NSZ9 544 aa33.47■■■□□ 2.95
BRF1-221ENST00000619151 IL17RAQ96F46 866 aa33.47■■■□□ 2.95
BRF1-221ENST00000619151 GNL3LQ9NVN8 582 aaKnown RBP33.47■■■□□ 2.95
BRF1-221ENST00000619151 KCNA3P22001 575 aa33.46■■■□□ 2.95
BRF1-221ENST00000619151 ANTXR1Q9H6X2 564 aa33.46■■■□□ 2.95
BRF1-221ENST00000619151 PPP1R1BQ9UD71 204 aaPredicted RBP33.46■■■□□ 2.95
BRF1-221ENST00000619151 COL11A2P13942 1736 aaPredicted RBP33.46■■■□□ 2.95
BRF1-221ENST00000619151 DPEP1P16444 411 aa33.45■■■□□ 2.95
BRF1-221ENST00000619151 ALDH1B1P30837 517 aa33.45■■■□□ 2.95
BRF1-221ENST00000619151 SLC4A3P48751 1232 aa33.45■■■□□ 2.95
BRF1-221ENST00000619151 CAVIN4Q5BKX8 364 aa33.44■■■□□ 2.94
BRF1-221ENST00000619151 ZMYM1Q5SVZ6 1142 aa33.44■■■□□ 2.94
BRF1-221ENST00000619151 KIAA1551Q9HCM1 1747 aa33.44■■■□□ 2.94
BRF1-221ENST00000619151 A0A0G2JLW4 131 aa33.43■■■□□ 2.94
BRF1-221ENST00000619151 SNAP23O00161 211 aa33.43■■■□□ 2.94
BRF1-221ENST00000619151 ST18O60284 1047 aa33.43■■■□□ 2.94
BRF1-221ENST00000619151 SPATA5Q8NB90 893 aa33.43■■■□□ 2.94
BRF1-221ENST00000619151 CNKSR1Q969H4 720 aa33.43■■■□□ 2.94
BRF1-221ENST00000619151 FHDC1Q9C0D6 1143 aaPredicted RBP33.43■■■□□ 2.94
BRF1-221ENST00000619151 BBOX1O75936 387 aa33.42■■■□□ 2.94
BRF1-221ENST00000619151 ZNF622Q969S3 477 aaKnown RBP eCLIP33.42■■■□□ 2.942e-8■■□□□ 12.3
BRF1-221ENST00000619151 HMG20BQ9P0W2 317 aa33.42■■■□□ 2.94
BRF1-221ENST00000619151 ZNF804BA4D1E1 1349 aa33.41■■■□□ 2.94
BRF1-221ENST00000619151 BCAMP50895 628 aa33.41■■■□□ 2.94
BRF1-221ENST00000619151 PTH1RQ03431 593 aa33.41■■■□□ 2.94
BRF1-221ENST00000619151 PI16Q6UXB8 463 aa33.41■■■□□ 2.94
BRF1-221ENST00000619151 KLHL34Q8N239 644 aa33.41■■■□□ 2.94
BRF1-221ENST00000619151 MAP4K1Q92918 833 aa33.41■■■□□ 2.94
BRF1-221ENST00000619151 DLEC1Q9Y238 1755 aa33.4■■■□□ 2.94
BRF1-221ENST00000619151 MYH7P12883 1935 aa33.4■■■□□ 2.94
BRF1-221ENST00000619151 RASGRF1Q13972 1273 aa33.4■■■□□ 2.94
BRF1-221ENST00000619151 TMC4Q7Z404 712 aa33.4■■■□□ 2.94
BRF1-221ENST00000619151 ZNF589Q86UQ0 364 aaPredicted RBP33.4■■■□□ 2.94
BRF1-221ENST00000619151 VPS37DQ86XT2 251 aa33.4■■■□□ 2.94
BRF1-221ENST00000619151 CYP2E1P05181 493 aaPredicted RBP33.39■■■□□ 2.94
BRF1-221ENST00000619151 PALD1Q9ULE6 856 aa33.39■■■□□ 2.94
BRF1-221ENST00000619151 RNF20Q5VTR2 975 aa33.38■■■□□ 2.93
BRF1-221ENST00000619151 LEMD3Q9Y2U8 911 aa33.38■■■□□ 2.93
BRF1-221ENST00000619151 RBM8AQ9Y5S9 174 aaKnown RBP33.38■■■□□ 2.93
BRF1-221ENST00000619151 XDHP47989 1333 aa33.38■■■□□ 2.93
BRF1-221ENST00000619151 SYT17Q9BSW7 474 aa33.38■■■□□ 2.93
BRF1-221ENST00000619151 ZKSCAN1P17029 563 aaPredicted RBP33.37■■■□□ 2.93
BRF1-221ENST00000619151 NLGN2Q8NFZ4 835 aa33.37■■■□□ 2.93
BRF1-221ENST00000619151 APPBP2Q92624 585 aa33.37■■■□□ 2.93
BRF1-221ENST00000619151 PIM2Q9P1W9 311 aa33.37■■■□□ 2.93
BRF1-221ENST00000619151 ANKIB1Q9P2G1 1089 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms