RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 RSRC2Q7L4I2 434 aaKnown RBP17.51■□□□□ 0.39
SRRT-217ENST00000618411 RABGGTAQ92696 567 aa17.51■□□□□ 0.39
SRRT-217ENST00000618411 A2ML1A8K2U0 1454 aa17.51■□□□□ 0.39
SRRT-217ENST00000618411 ACEP12821 1306 aa17.51■□□□□ 0.39
SRRT-217ENST00000618411 CEP170BQ9Y4F5 1589 aaPredicted RBP17.51■□□□□ 0.39
SRRT-217ENST00000618411 NCAPHQ15003 741 aa17.51■□□□□ 0.39
SRRT-217ENST00000618411 NSUN7Q8NE18 718 aaKnown RBP17.51■□□□□ 0.39
SRRT-217ENST00000618411 CCDC34Q96HJ3 373 aa17.51■□□□□ 0.39
SRRT-217ENST00000618411 RRP15Q9Y3B9 282 aaKnown RBP17.51■□□□□ 0.39
SRRT-217ENST00000618411 IKBKBO14920 756 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 NLRP12P59046 1061 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 FANCCQ00597 558 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 ZNF589Q86UQ0 364 aaPredicted RBP17.5■□□□□ 0.39
SRRT-217ENST00000618411 PCDHA7Q9UN72 937 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 NEO1Q92859 1461 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 METP08581 1390 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 GOLGA6L1Q8N7Z2 621 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 EAF2Q96CJ1 260 aaPredicted RBP17.5■□□□□ 0.39
SRRT-217ENST00000618411 PA2G4Q9UQ80 394 aaKnown RBP17.5■□□□□ 0.39
SRRT-217ENST00000618411 PLEKHG3A1L390 1219 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 GOLGA6L9A6NEM1 432 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 IVLP07476 585 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 LMAN1P49257 510 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 PARD6BQ9BYG5 372 aa17.5■□□□□ 0.39
SRRT-217ENST00000618411 TECPR2O15040 1411 aa17.49■□□□□ 0.39
SRRT-217ENST00000618411 USP6P35125 1406 aa17.49■□□□□ 0.39
SRRT-217ENST00000618411 HOXB7P09629 217 aa17.49■□□□□ 0.39
SRRT-217ENST00000618411 RTEL1Q9NZ71 1219 aa17.49■□□□□ 0.39
SRRT-217ENST00000618411 CCDC151A5D8V7 595 aa17.49■□□□□ 0.39
SRRT-217ENST00000618411 SOX12O15370 315 aa17.49■□□□□ 0.39
SRRT-217ENST00000618411 NOM1Q5C9Z4 860 aaKnown RBP17.49■□□□□ 0.39
SRRT-217ENST00000618411 UTP14AQ9BVJ6 771 aaKnown RBP17.49■□□□□ 0.39
SRRT-217ENST00000618411 EPC1Q9H2F5 836 aa17.49■□□□□ 0.39
SRRT-217ENST00000618411 A0A1B0GVL5 298 aa17.48■□□□□ 0.39
SRRT-217ENST00000618411 CBFA2T2O43439 604 aa17.48■□□□□ 0.39
SRRT-217ENST00000618411 FMNL2Q96PY5 1086 aa17.48■□□□□ 0.39
SRRT-217ENST00000618411 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
SRRT-217ENST00000618411 MAP2K7O14733 419 aa17.48■□□□□ 0.39
SRRT-217ENST00000618411 SASH1O94885 1247 aa17.48■□□□□ 0.39
SRRT-217ENST00000618411 NPM1P06748 294 aaKnown RBP eCLIP17.48■□□□□ 0.39
SRRT-217ENST00000618411 SLC3A2P08195 630 aaKnown RBP17.48■□□□□ 0.39
SRRT-217ENST00000618411 EIF2S2P20042 333 aaKnown RBP17.48■□□□□ 0.39
SRRT-217ENST00000618411 NDUFA8P51970 172 aa17.48■□□□□ 0.39
SRRT-217ENST00000618411 PPP2R3AQ06190 1150 aa17.48■□□□□ 0.39
SRRT-217ENST00000618411 CERS3Q8IU89 383 aa17.48■□□□□ 0.39
SRRT-217ENST00000618411 MRFAP1Q9Y605 127 aa17.48■□□□□ 0.39
SRRT-217ENST00000618411 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
SRRT-217ENST00000618411 PTPDC1A2A3K4 754 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 VWA3AA6NCI4 1184 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 ARHGAP6O43182 974 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 GNL2Q13823 731 aaKnown RBP17.47■□□□□ 0.39
SRRT-217ENST00000618411 BRD3Q15059 726 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 ICE2Q659A1 982 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 LEKR1Q6ZMV7 388 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 CCDC8Q9H0W5 538 aaPredicted RBP17.47■□□□□ 0.39
SRRT-217ENST00000618411 C9orf78Q9NZ63 289 aaPredicted RBP17.47■□□□□ 0.39
SRRT-217ENST00000618411 ABCC6O95255 1503 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 NEDD4P46934 1319 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 PLEKHG2Q9H7P9 1386 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 CTDNEP1O95476 244 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 G3BP1Q13283 466 aaKnown RBP eCLIP17.47■□□□□ 0.393e-7■■■■□ 21.5
SRRT-217ENST00000618411 LONRF2Q1L5Z9 754 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 GEMIN8Q9NWZ8 242 aaKnown RBP17.47■□□□□ 0.39
SRRT-217ENST00000618411 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
SRRT-217ENST00000618411 HMGB1P09429 215 aaKnown RBP17.46■□□□□ 0.39
SRRT-217ENST00000618411 LMOD1P29536 600 aaPredicted RBP17.46■□□□□ 0.39
SRRT-217ENST00000618411 ILDR1Q86SU0 546 aaPredicted RBP17.46■□□□□ 0.39
SRRT-217ENST00000618411 PPP2R2CQ9Y2T4 447 aa17.46■□□□□ 0.39
SRRT-217ENST00000618411 AMPHP49418 695 aa17.46■□□□□ 0.39
SRRT-217ENST00000618411 MSL3Q8N5Y2 521 aaKnown RBP17.46■□□□□ 0.39
SRRT-217ENST00000618411 GOLGA1Q92805 767 aa17.46■□□□□ 0.39
SRRT-217ENST00000618411 H3BQF6 201 aa17.46■□□□□ 0.38
SRRT-217ENST00000618411 RPS6KA5O75582 802 aa17.46■□□□□ 0.38
SRRT-217ENST00000618411 TXLNAP40222 546 aa17.46■□□□□ 0.38
SRRT-217ENST00000618411 GTF2A1P52655 376 aaPredicted RBP17.46■□□□□ 0.38
SRRT-217ENST00000618411 GYS2P54840 703 aa17.46■□□□□ 0.38
SRRT-217ENST00000618411 UBASH3AP57075 661 aa17.46■□□□□ 0.38
SRRT-217ENST00000618411 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
SRRT-217ENST00000618411 A0A1B0GUL7 405 aa17.45■□□□□ 0.38
SRRT-217ENST00000618411 FOSBP53539 338 aa17.45■□□□□ 0.38
SRRT-217ENST00000618411 GNG11P61952 73 aa17.45■□□□□ 0.38
SRRT-217ENST00000618411 LINC00301Q8NCQ3 95 aa17.45■□□□□ 0.38
SRRT-217ENST00000618411 KCNG4Q8TDN1 519 aa17.45■□□□□ 0.38
SRRT-217ENST00000618411 CHMP4CQ96CF2 233 aa17.45■□□□□ 0.38
SRRT-217ENST00000618411 RGS22Q8NE09 1264 aa17.45■□□□□ 0.38
SRRT-217ENST00000618411 HNRNPLLQ8WVV9 542 aaKnown RBP17.45■□□□□ 0.38
SRRT-217ENST00000618411 HSD3B7Q9H2F3 369 aa17.45■□□□□ 0.38
SRRT-217ENST00000618411 SALL1Q9NSC2 1324 aa17.45■□□□□ 0.38
SRRT-217ENST00000618411 BIN1O00499 593 aa17.44■□□□□ 0.38
SRRT-217ENST00000618411 MAGEA9P43362 315 aa17.44■□□□□ 0.38
SRRT-217ENST00000618411 SF3A1Q15459 793 aaKnown RBP17.44■□□□□ 0.38
SRRT-217ENST00000618411 VSTM4Q8IW00 320 aa17.44■□□□□ 0.38
SRRT-217ENST00000618411 WDR24Q96S15 920 aa17.44■□□□□ 0.38
SRRT-217ENST00000618411 SIL1Q9H173 461 aa17.44■□□□□ 0.38
SRRT-217ENST00000618411 BRMS1Q9HCU9 246 aa17.44■□□□□ 0.38
SRRT-217ENST00000618411 MYO1BO43795 1136 aa17.44■□□□□ 0.38
SRRT-217ENST00000618411 YEATS4O95619 227 aa17.44■□□□□ 0.38
SRRT-217ENST00000618411 CYP21A2P08686 494 aa17.44■□□□□ 0.38
SRRT-217ENST00000618411 ATP1A3P13637 1013 aa17.44■□□□□ 0.38
SRRT-217ENST00000618411 EIF4A1P60842 406 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms