RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 CHRNDQ07001 517 aa10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 NMIQ13287 307 aaPredicted RBP10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 PRR5LQ6MZQ0 368 aa10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 DDX46Q7L014 1031 aaKnown RBP10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 ERICH6Q7L0X2 663 aa10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 NLGN1Q8N2Q7 840 aa10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 CCDC24Q8N4L8 307 aa10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 CNBD1Q8NA66 436 aa10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 KBTBD3Q8NAB2 608 aa10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 SNX21Q969T3 373 aa10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 EDC3Q96F86 508 aaKnown RBP10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 RAD50Q92878 1312 aa10.55□□□□□ -0.72
CNTNAP3B-213ENST00000617848 GOLIM4O00461 696 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 MAP3K13O43283 966 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 TAF5LO75529 589 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 SLC4A3P48751 1232 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 ANAPC15P60006 121 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 RABEP1Q15276 862 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 LRRFIP1Q32MZ4 808 aaKnown RBP10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 UBR3Q6ZT12 1888 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 COL23A1Q86Y22 540 aaPredicted RBP10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 CELF1Q92879 486 aaKnown RBP10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 CAMKK2Q96RR4 588 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 TBC1D2Q9BYX2 928 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 LSG1Q9H089 658 aaKnown RBP10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 SNRKQ9NRH2 765 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 LAMB2P55268 1798 aa10.54□□□□□ -0.72
CNTNAP3B-213ENST00000617848 COL24A1Q17RW2 1714 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 POLRMTO00411 1230 aaKnown RBP10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 ARID4AP29374 1257 aaPredicted RBP10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 SF3B2Q13435 895 aaKnown RBP10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 UBE4AQ14139 1066 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 CCDC102BQ68D86 513 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 HSCBQ8IWL3 235 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 FAM227BQ96M60 508 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 SGIP1Q9BQI5 828 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 ANKRD2Q9GZV1 360 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 IL25Q9H293 177 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 HELLSQ9NRZ9 838 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 MINPP1Q9UNW1 487 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 NDUFB9Q9Y6M9 179 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 LRP5O75197 1615 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 C4AP0C0L4 1744 aa10.53□□□□□ -0.72
CNTNAP3B-213ENST00000617848 A0A0D9SFI3 127 aa10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 RNF113AO15541 343 aaKnown RBP10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 HSPA4P34932 840 aa10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 ZAP70P43403 619 aa10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 FKBP4Q02790 459 aaKnown RBP eCLIP10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 DDR1Q08345 913 aa10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 EZH2Q15910 746 aaKnown RBP10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 DCAF8Q5TAQ9 597 aa10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 ASTLQ6HA08 431 aaPredicted RBP10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 IL27Q8NEV9 243 aa10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 IL17RAQ96F46 866 aa10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 RBM17Q96I25 401 aaKnown RBP10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 STK32BQ9NY57 414 aa10.52□□□□□ -0.73
CNTNAP3B-213ENST00000617848 ZFYP08048 801 aaPredicted RBP10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 MCAMP43121 646 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 PHKA1P46020 1223 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 BAG6P46379 1132 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 PTH1RQ03431 593 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 GRAPQ13588 217 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 SCARF1Q14162 830 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 TTF1Q15361 905 aaPredicted RBP10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 SLC15A2Q16348 729 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 MCMDC2Q4G0Z9 681 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 ZMYM1Q5SVZ6 1142 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 ZSCAN25Q6NSZ9 544 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 GRAPLQ8TC17 118 aaPredicted RBP10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 RPGRQ92834 1020 aaKnown RBP10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 ANTXR1Q9H6X2 564 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 PCDHB13Q9Y5F0 798 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 CCDC171Q6TFL3 1326 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 PNPLA7Q6ZV29 1317 aa10.51□□□□□ -0.73
CNTNAP3B-213ENST00000617848 AK9Q5TCS8 1911 aa10.5□□□□□ -0.73
CNTNAP3B-213ENST00000617848 KLRG2A4D1S0 409 aaPredicted RBP10.5□□□□□ -0.73
CNTNAP3B-213ENST00000617848 SNAP23O00161 211 aa10.5□□□□□ -0.73
CNTNAP3B-213ENST00000617848 BCAMP50895 628 aa10.5□□□□□ -0.73
CNTNAP3B-213ENST00000617848 CRY2Q49AN0 593 aa10.5□□□□□ -0.73
CNTNAP3B-213ENST00000617848 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
CNTNAP3B-213ENST00000617848 GNL3LQ9NVN8 582 aaKnown RBP10.5□□□□□ -0.73
CNTNAP3B-213ENST00000617848 PARP3Q9Y6F1 533 aa10.5□□□□□ -0.73
CNTNAP3B-213ENST00000617848 ATMINO43313 823 aaPredicted RBP10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 ST18O60284 1047 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 BBOX1O75936 387 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 CYP2E1P05181 493 aaPredicted RBP10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 HOXA10P31260 410 aaPredicted RBP10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 KCNJ4P48050 445 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 CAVIN4Q5BKX8 364 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 SPATA5Q8NB90 893 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 KCNB2Q92953 911 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 CRAMP1Q96RY5 1269 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 HMG20BQ9P0W2 317 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 PALD1Q9ULE6 856 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 LEMD3Q9Y2U8 911 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 TNS1Q9HBL0 1735 aaKnown RBP10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 MED23Q9ULK4 1368 aa10.49□□□□□ -0.73
CNTNAP3B-213ENST00000617848 RGPD3A6NKT7 1758 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms