RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 TMEM87AQ8NBN3 555 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 SIL1Q9H173 461 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 L2HGDHQ9H9P8 463 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 ATG3Q9NT62 314 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 GOLGA6BA6NDN3 693 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 TUBBP07437 444 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 PIP4K2BP78356 416 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 GNPTABQ3T906 1256 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 NFATC2IPQ8NCF5 419 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 SMARCC2Q8TAQ2 1214 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 STAG1Q8WVM7 1258 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 SH2B1Q9NRF2 756 aaPredicted RBP8.43□□□□□ -1.06
PDE6A-205ENST00000617647 BSDC1Q9NW68 430 aaPredicted RBP8.43□□□□□ -1.06
PDE6A-205ENST00000617647 NUP160Q12769 1436 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 ADCY2Q08462 1091 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 IFT88Q13099 833 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 RRP12Q5JTH9 1297 aaKnown RBP8.42□□□□□ -1.06
PDE6A-205ENST00000617647 MFSD4BQ5TF39 518 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 RPAP2Q8IXW5 612 aaPredicted RBP8.42□□□□□ -1.06
PDE6A-205ENST00000617647 DHX58Q96C10 678 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 TPX2Q9ULW0 747 aaKnown RBP8.42□□□□□ -1.06
PDE6A-205ENST00000617647 ATAD2Q6PL18 1390 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 EXOC5O00471 708 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 HSF2BPO75031 334 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 CCDC175P0C221 793 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 CPA1P15085 419 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 CCZ1BP86790 482 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 CCZ1P86791 482 aaPredicted RBP8.42□□□□□ -1.06
PDE6A-205ENST00000617647 PLEKHO1Q53GL0 409 aaPredicted RBP8.42□□□□□ -1.06
PDE6A-205ENST00000617647 C11orf57Q6ZUT1 292 aaPredicted RBP8.42□□□□□ -1.06
PDE6A-205ENST00000617647 BAG1Q99933 345 aaPredicted RBP8.42□□□□□ -1.06
PDE6A-205ENST00000617647 CCDC189A1A4V9 331 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 KLHL33A6NCF5 533 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 ATP1A2P50993 1020 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 CCNHP51946 323 aaPredicted RBP8.42□□□□□ -1.06
PDE6A-205ENST00000617647 TUBB4BP68371 445 aa8.42□□□□□ -1.06
PDE6A-205ENST00000617647 E4F1Q66K89 784 aaPredicted RBP8.42□□□□□ -1.06
PDE6A-205ENST00000617647 SPDYE1Q8NFV5 336 aaPredicted RBP8.42□□□□□ -1.06
PDE6A-205ENST00000617647 ARHGEF12Q9NZN5 1544 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 TMPOP42166 694 aaKnown RBP8.41□□□□□ -1.06
PDE6A-205ENST00000617647 ALDH1L2Q3SY69 923 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 PRPF40BQ6NWY9 871 aaKnown RBP8.41□□□□□ -1.06
PDE6A-205ENST00000617647 SRGAP1Q7Z6B7 1085 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 TSC22D3Q99576 134 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.41□□□□□ -1.06
PDE6A-205ENST00000617647 PPP2R2CQ9Y2T4 447 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 GPTP24298 496 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 PSMA5P28066 241 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 MXRA7P84157 204 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 TWISTNBQ3B726 338 aaPredicted RBP8.41□□□□□ -1.06
PDE6A-205ENST00000617647 ZBTB7BO15156 539 aaPredicted RBP8.41□□□□□ -1.06
PDE6A-205ENST00000617647 SLC3A2P08195 630 aaKnown RBP8.41□□□□□ -1.06
PDE6A-205ENST00000617647 POLD1P28340 1107 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 WHAMMP3Q1A5X7 153 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 SYNE3Q6ZMZ3 975 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 RNF168Q8IYW5 571 aaPredicted RBP8.41□□□□□ -1.06
PDE6A-205ENST00000617647 IGSF22Q8N9C0 903 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 PARD3BQ8TEW8 1205 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 FAM53CQ9NYF3 392 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 ABCA8O94911 1581 aa8.41□□□□□ -1.06
PDE6A-205ENST00000617647 KIF3BO15066 747 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 MYBL2P10244 700 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 SF3B2Q13435 895 aaKnown RBP8.4□□□□□ -1.06
PDE6A-205ENST00000617647 CNTROBQ8N137 903 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 DESI2Q9BSY9 194 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 SUGCTQ9HAC7 445 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 TPCN1Q9ULQ1 816 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 ANKRD18BA2A2Z9 1011 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 EIF4E1BA6NMX2 242 aaKnown RBP8.4□□□□□ -1.06
PDE6A-205ENST00000617647 ARHGAP6O43182 974 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 MATR3P43243 847 aaKnown RBP eCLIP8.4□□□□□ -1.06
PDE6A-205ENST00000617647 PDE1AP54750 535 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 GOLGA8FQ08AF8 430 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 GOLGA8DPQ0D2H9 430 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 PPFIA1Q13136 1202 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 IQCEQ6IPM2 695 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 SLC30A9Q6PML9 568 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 SPATS2Q86XZ4 545 aaKnown RBP8.4□□□□□ -1.06
PDE6A-205ENST00000617647 STK11IPQ8N1F8 1099 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 KLHL23Q8NBE8 558 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 MIPOL1Q8TD10 442 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 LEO1Q8WVC0 666 aaPredicted RBP8.4□□□□□ -1.06
PDE6A-205ENST00000617647 CAPZA3Q96KX2 299 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 DCTPP1Q9H773 170 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 SPG7Q9UQ90 795 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 MTMR6Q9Y217 621 aa8.4□□□□□ -1.06
PDE6A-205ENST00000617647 HNRNPMP52272 730 aaKnown RBP eCLIP8.4□□□□□ -1.07
PDE6A-205ENST00000617647 FKBP15Q5T1M5 1219 aa8.4□□□□□ -1.07
PDE6A-205ENST00000617647 ZKSCAN4Q969J2 545 aaPredicted RBP8.4□□□□□ -1.07
PDE6A-205ENST00000617647 TESK2Q96S53 571 aa8.4□□□□□ -1.07
PDE6A-205ENST00000617647 RMI1Q9H9A7 625 aa8.4□□□□□ -1.07
PDE6A-205ENST00000617647 IL1RAPL2Q9NP60 686 aa8.4□□□□□ -1.07
PDE6A-205ENST00000617647 ANAPC4Q9UJX5 808 aa8.4□□□□□ -1.07
PDE6A-205ENST00000617647 PTPRGP23470 1445 aa8.4□□□□□ -1.07
PDE6A-205ENST00000617647 CPP00450 1065 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 FANCCQ00597 558 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 MYO1EQ12965 1108 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 SNX1Q13596 522 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 HHATQ5VTY9 493 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 TRIM68Q6AZZ1 485 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms