RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ERFEQ4G0M1 354 aa22.83■■□□□ 1.25
MMP28-204ENST00000615136 SRP68Q9UHB9 627 aaKnown RBP22.83■■□□□ 1.25
MMP28-204ENST00000615136 PHKA1P46020 1223 aa22.82■■□□□ 1.24
MMP28-204ENST00000615136 TSGA10IPQ3SY00 556 aa22.82■■□□□ 1.24
MMP28-204ENST00000615136 CLEC4GQ6UXB4 293 aa22.82■■□□□ 1.24
MMP28-204ENST00000615136 ZNF652Q9Y2D9 606 aa22.82■■□□□ 1.24
MMP28-204ENST00000615136 FGFR2P21802 821 aa22.82■■□□□ 1.24
MMP28-204ENST00000615136 TBC1D9BQ66K14 1250 aa22.82■■□□□ 1.24
MMP28-204ENST00000615136 CAVIN1Q6NZI2 390 aaKnown RBP22.82■■□□□ 1.24
MMP28-204ENST00000615136 GPT2Q8TD30 523 aa22.82■■□□□ 1.24
MMP28-204ENST00000615136 HMG20BQ9P0W2 317 aa22.82■■□□□ 1.24
MMP28-204ENST00000615136 CCNL1Q9UK58 526 aaPredicted RBP22.82■■□□□ 1.24
MMP28-204ENST00000615136 SBF2Q86WG5 1849 aa22.82■■□□□ 1.24
MMP28-204ENST00000615136 SCN7AQ01118 1682 aa22.81■■□□□ 1.24
MMP28-204ENST00000615136 MYO5AQ9Y4I1 1855 aaKnown RBP22.81■■□□□ 1.24
MMP28-204ENST00000615136 ME3Q16798 604 aa22.81■■□□□ 1.24
MMP28-204ENST00000615136 ZSCAN23Q3MJ62 389 aa22.81■■□□□ 1.24
MMP28-204ENST00000615136 TPCN1Q9ULQ1 816 aa22.81■■□□□ 1.24
MMP28-204ENST00000615136 U3KPZ7 1027 aaPredicted RBP22.81■■□□□ 1.24
MMP28-204ENST00000615136 RPS6KB1P23443 525 aa22.81■■□□□ 1.24
MMP28-204ENST00000615136 PSMA5P28066 241 aa22.81■■□□□ 1.24
MMP28-204ENST00000615136 CCDC152Q4G0S7 254 aa22.81■■□□□ 1.24
MMP28-204ENST00000615136 BLOC1S2Q6QNY1 142 aa22.81■■□□□ 1.24
MMP28-204ENST00000615136 RRAGDQ9NQL2 400 aaPredicted RBP22.81■■□□□ 1.24
MMP28-204ENST00000615136 TAF1P21675 1872 aa22.8■■□□□ 1.24
MMP28-204ENST00000615136 GNPATO15228 680 aa22.8■■□□□ 1.24
MMP28-204ENST00000615136 ATRNO75882 1429 aa22.8■■□□□ 1.24
MMP28-204ENST00000615136 CCDC102BQ68D86 513 aa22.8■■□□□ 1.24
MMP28-204ENST00000615136 MROH5Q6ZUA9 1318 aa22.8■■□□□ 1.24
MMP28-204ENST00000615136 STOX1Q6ZVD7 989 aa22.8■■□□□ 1.24
MMP28-204ENST00000615136 CCDC83Q8IWF9 413 aa22.8■■□□□ 1.24
MMP28-204ENST00000615136 ABCC12Q96J65 1359 aa22.8■■□□□ 1.24
MMP28-204ENST00000615136 CASZ1Q86V15 1759 aa22.79■■□□□ 1.24
MMP28-204ENST00000615136 RPS6KA4O75676 772 aa22.79■■□□□ 1.24
MMP28-204ENST00000615136 HSPD1P10809 573 aaKnown RBP22.79■■□□□ 1.24
MMP28-204ENST00000615136 PUM3Q15397 648 aaKnown RBP22.79■■□□□ 1.24
MMP28-204ENST00000615136 SEPT12Q8IYM1 358 aa22.79■■□□□ 1.24
MMP28-204ENST00000615136 MPHOSPH8Q99549 860 aa22.79■■□□□ 1.24
MMP28-204ENST00000615136 FOXP2O15409 715 aa22.79■■□□□ 1.24
MMP28-204ENST00000615136 TOB2Q14106 344 aaPredicted RBP22.79■■□□□ 1.24
MMP28-204ENST00000615136 NECAB1Q8N987 351 aa22.79■■□□□ 1.24
MMP28-204ENST00000615136 ARAP2Q8WZ64 1704 aa22.78■■□□□ 1.24
MMP28-204ENST00000615136 WDR33Q9C0J8 1336 aaKnown RBP22.78■■□□□ 1.24
MMP28-204ENST00000615136 LY75O60449 1722 aa22.78■■□□□ 1.24
MMP28-204ENST00000615136 ONECUT3O60422 494 aaPredicted RBP22.78■■□□□ 1.24
MMP28-204ENST00000615136 RC3H1Q5TC82 1133 aaKnown RBP22.78■■□□□ 1.24
MMP28-204ENST00000615136 LPIN2Q92539 896 aa22.78■■□□□ 1.24
MMP28-204ENST00000615136 DSCC1Q9BVC3 393 aa22.78■■□□□ 1.24
MMP28-204ENST00000615136 PIH1D3Q9NQM4 214 aaKnown RBP22.78■■□□□ 1.24
MMP28-204ENST00000615136 TAF1LQ8IZX4 1826 aa22.78■■□□□ 1.24
MMP28-204ENST00000615136 RTL9Q8NET4 1388 aa22.78■■□□□ 1.24
MMP28-204ENST00000615136 MYH7P12883 1935 aa22.77■■□□□ 1.24
MMP28-204ENST00000615136 MBD3O95983 291 aa22.77■■□□□ 1.24
MMP28-204ENST00000615136 NCLP19338 710 aaKnown RBP22.77■■□□□ 1.24
MMP28-204ENST00000615136 TICAM2Q86XR7 235 aa22.77■■□□□ 1.24
MMP28-204ENST00000615136 ZNF512BQ96KM6 892 aaPredicted RBP22.77■■□□□ 1.24
MMP28-204ENST00000615136 PUS7LQ9H0K6 701 aaKnown RBP22.77■■□□□ 1.24
MMP28-204ENST00000615136 WASHC4Q2M389 1173 aa22.77■■□□□ 1.24
MMP28-204ENST00000615136 TTLL5Q6EMB2 1281 aa22.77■■□□□ 1.24
MMP28-204ENST00000615136 NARFQ9UHQ1 456 aa22.77■■□□□ 1.24
MMP28-204ENST00000615136 ARID4AP29374 1257 aaPredicted RBP22.76■■□□□ 1.23
MMP28-204ENST00000615136 NEK1Q96PY6 1258 aa22.76■■□□□ 1.23
MMP28-204ENST00000615136 LAMA4Q16363 1823 aa22.76■■□□□ 1.23
MMP28-204ENST00000615136 WTIPA6NIX2 430 aaPredicted RBP22.75■■□□□ 1.23
MMP28-204ENST00000615136 NASPP49321 788 aaPredicted RBP22.75■■□□□ 1.23
MMP28-204ENST00000615136 TRPC5Q9UL62 973 aaPredicted RBP22.75■■□□□ 1.23
MMP28-204ENST00000615136 IGHMBP2P38935 993 aaKnown RBP22.75■■□□□ 1.23
MMP28-204ENST00000615136 CCDC24Q8N4L8 307 aa22.75■■□□□ 1.23
MMP28-204ENST00000615136 CHRNDQ07001 517 aa22.74■■□□□ 1.23
MMP28-204ENST00000615136 ARHGEF1Q92888 912 aaKnown RBP22.74■■□□□ 1.23
MMP28-204ENST00000615136 ZSCAN31Q96LW9 406 aaPredicted RBP22.74■■□□□ 1.23
MMP28-204ENST00000615136 KRT32Q14532 448 aa22.74■■□□□ 1.23
MMP28-204ENST00000615136 ALDH8A1Q9H2A2 487 aaPredicted RBP22.74■■□□□ 1.23
MMP28-204ENST00000615136 SH2B1Q9NRF2 756 aaPredicted RBP22.74■■□□□ 1.23
MMP28-204ENST00000615136 TMEM63CQ9P1W3 806 aa22.74■■□□□ 1.23
MMP28-204ENST00000615136 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.74■■□□□ 1.23
MMP28-204ENST00000615136 ZFYP08048 801 aaPredicted RBP22.73■■□□□ 1.23
MMP28-204ENST00000615136 SLC5A1P13866 664 aa22.73■■□□□ 1.23
MMP28-204ENST00000615136 APPBP2Q92624 585 aa22.73■■□□□ 1.23
MMP28-204ENST00000615136 LRRC2Q9BYS8 371 aa22.73■■□□□ 1.23
MMP28-204ENST00000615136 LRRC4BQ9NT99 713 aa22.73■■□□□ 1.23
MMP28-204ENST00000615136 SMC3Q9UQE7 1217 aa22.73■■□□□ 1.23
MMP28-204ENST00000615136 CCDC173Q0VFZ6 552 aa22.72■■□□□ 1.23
MMP28-204ENST00000615136 RASGRF1Q13972 1273 aa22.72■■□□□ 1.23
MMP28-204ENST00000615136 FOXD4L6Q3SYB3 417 aaPredicted RBP22.72■■□□□ 1.23
MMP28-204ENST00000615136 FOXD4L3Q6VB84 417 aaPredicted RBP22.72■■□□□ 1.23
MMP28-204ENST00000615136 PPP1R9BQ96SB3 815 aa22.72■■□□□ 1.23
MMP28-204ENST00000615136 RBM27Q9P2N5 1060 aaKnown RBP22.72■■□□□ 1.23
MMP28-204ENST00000615136 RTCBQ9Y3I0 505 aaKnown RBP22.72■■□□□ 1.23
MMP28-204ENST00000615136 GJB2P29033 226 aa22.72■■□□□ 1.23
MMP28-204ENST00000615136 ADD2P35612 726 aa22.72■■□□□ 1.23
MMP28-204ENST00000615136 BCAMP50895 628 aa22.72■■□□□ 1.23
MMP28-204ENST00000615136 SF3B3Q15393 1217 aaKnown RBP22.72■■□□□ 1.23
MMP28-204ENST00000615136 QTRT2Q9H974 415 aaKnown RBP22.72■■□□□ 1.23
MMP28-204ENST00000615136 WWC3Q9ULE0 1092 aa22.72■■□□□ 1.23
MMP28-204ENST00000615136 NSFL1CQ9UNZ2 370 aaKnown RBP22.72■■□□□ 1.23
MMP28-204ENST00000615136 TCHHQ07283 1943 aa22.72■■□□□ 1.23
MMP28-204ENST00000615136 C4BP0C0L5 1744 aa22.72■■□□□ 1.23
MMP28-204ENST00000615136 IDH1O75874 414 aaKnown RBP22.71■■□□□ 1.23
MMP28-204ENST00000615136 PHF14O94880 888 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms