RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 KIAA2012Q0VF49 1180 aa9.51□□□□□ -0.89
FAM228B-209ENST00000615135 MTHFSDQ2M296 383 aaKnown RBP9.51□□□□□ -0.89
FAM228B-209ENST00000615135 SLC51AQ86UW1 340 aa9.51□□□□□ -0.89
FAM228B-209ENST00000615135 RPGRQ92834 1020 aaKnown RBP9.51□□□□□ -0.89
FAM228B-209ENST00000615135 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
FAM228B-209ENST00000615135 ATP6V0A2Q9Y487 856 aa9.51□□□□□ -0.89
FAM228B-209ENST00000615135 ABCC12Q96J65 1359 aa9.5□□□□□ -0.89
FAM228B-209ENST00000615135 SIPA1L3O60292 1781 aaPredicted RBP9.5□□□□□ -0.89
FAM228B-209ENST00000615135 ADM5C9JUS6 153 aa9.5□□□□□ -0.89
FAM228B-209ENST00000615135 RAD17O75943 681 aa9.5□□□□□ -0.89
FAM228B-209ENST00000615135 EN2P19622 333 aaPredicted RBP9.5□□□□□ -0.89
FAM228B-209ENST00000615135 GTF2E1P29083 439 aaPredicted RBP9.5□□□□□ -0.89
FAM228B-209ENST00000615135 SAMD7Q7Z3H4 446 aa9.5□□□□□ -0.89
FAM228B-209ENST00000615135 ARMC5Q96C12 935 aa9.5□□□□□ -0.89
FAM228B-209ENST00000615135 DCPSQ96C86 337 aaKnown RBP9.5□□□□□ -0.89
FAM228B-209ENST00000615135 RBM17Q96I25 401 aaKnown RBP9.5□□□□□ -0.89
FAM228B-209ENST00000615135 CCDC136Q96JN2 1154 aa9.5□□□□□ -0.89
FAM228B-209ENST00000615135 NYXQ9GZU5 481 aa9.5□□□□□ -0.89
FAM228B-209ENST00000615135 USP16Q9Y5T5 823 aa9.5□□□□□ -0.89
FAM228B-209ENST00000615135 YDJCA8MPS7 323 aa9.49□□□□□ -0.89
FAM228B-209ENST00000615135 H0YGN5 161 aa9.49□□□□□ -0.89
FAM228B-209ENST00000615135 EGFRP00533 1210 aa9.49□□□□□ -0.89
FAM228B-209ENST00000615135 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
FAM228B-209ENST00000615135 IL17REQ8NFR9 667 aa9.49□□□□□ -0.89
FAM228B-209ENST00000615135 KHSRPQ92945 711 aaKnown RBP eCLIP9.49□□□□□ -0.89
FAM228B-209ENST00000615135 MAPK8IP3Q9UPT6 1336 aa9.49□□□□□ -0.89
FAM228B-209ENST00000615135 IBTKQ9P2D0 1353 aaPredicted RBP9.49□□□□□ -0.89
FAM228B-209ENST00000615135 HTTP42858 3142 aa9.48□□□□□ -0.89
FAM228B-209ENST00000615135 PRAMEF22A3QJZ6 481 aa9.48□□□□□ -0.89
FAM228B-209ENST00000615135 FAM177BA6PVY3 158 aa9.48□□□□□ -0.89
FAM228B-209ENST00000615135 NBPF26B4DH59 902 aa9.48□□□□□ -0.89
FAM228B-209ENST00000615135 HLFQ16534 295 aa9.48□□□□□ -0.89
FAM228B-209ENST00000615135 TMEM132AQ24JP5 1023 aa9.48□□□□□ -0.89
FAM228B-209ENST00000615135 NBPF10Q6P3W6 841 aaKnown RBP9.48□□□□□ -0.89
FAM228B-209ENST00000615135 NUTM1Q86Y26 1132 aa9.48□□□□□ -0.89
FAM228B-209ENST00000615135 NGEFQ8N5V2 710 aa9.48□□□□□ -0.89
FAM228B-209ENST00000615135 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.48□□□□□ -0.89
FAM228B-209ENST00000615135 CDCA5Q96FF9 252 aa9.48□□□□□ -0.89
FAM228B-209ENST00000615135 PRO3102Q9H379 93 aa9.48□□□□□ -0.89
FAM228B-209ENST00000615135 RPS12P25398 132 aaKnown RBP9.47□□□□□ -0.89
FAM228B-209ENST00000615135 PIP4K2AP48426 406 aaPredicted RBP9.47□□□□□ -0.89
FAM228B-209ENST00000615135 TEFQ10587 303 aa9.47□□□□□ -0.89
FAM228B-209ENST00000615135 TBC1D10BQ4KMP7 808 aaPredicted RBP9.47□□□□□ -0.89
FAM228B-209ENST00000615135 OTOP1Q7RTM1 612 aa9.47□□□□□ -0.89
FAM228B-209ENST00000615135 SULF1Q8IWU6 871 aa9.47□□□□□ -0.89
FAM228B-209ENST00000615135 SP8Q8IXZ3 490 aa9.47□□□□□ -0.89
FAM228B-209ENST00000615135 TMX4Q9H1E5 349 aaPredicted RBP9.47□□□□□ -0.89
FAM228B-209ENST00000615135 R3HDMLQ9H3Y0 253 aa9.47□□□□□ -0.89
FAM228B-209ENST00000615135 RBM27Q9P2N5 1060 aaKnown RBP9.47□□□□□ -0.89
FAM228B-209ENST00000615135 PCDHGA4Q9Y5G9 962 aa9.47□□□□□ -0.89
FAM228B-209ENST00000615135 COL6A3P12111 3177 aa9.47□□□□□ -0.89
FAM228B-209ENST00000615135 RANBP2P49792 3224 aaKnown RBP9.46□□□□□ -0.89
FAM228B-209ENST00000615135 ERVV-1B6SEH8 477 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 TRIM66O15016 1216 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 KCNQ3O43525 872 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 BBOX1O75936 387 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 DPP8Q6V1X1 898 aaPredicted RBP9.46□□□□□ -0.9
FAM228B-209ENST00000615135 MPNDQ8N594 471 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 RUNDC1Q96C34 613 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 CDCA7LQ96GN5 454 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 CDHR5Q9HBB8 845 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 PTPN22Q9Y2R2 807 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 TRIM17Q9Y577 477 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 CEMIPQ8WUJ3 1361 aa9.46□□□□□ -0.9
FAM228B-209ENST00000615135 PSMD14O00487 310 aa9.45□□□□□ -0.9
FAM228B-209ENST00000615135 APAF1O14727 1248 aa9.45□□□□□ -0.9
FAM228B-209ENST00000615135 TCERG1O14776 1098 aaKnown RBP9.45□□□□□ -0.9
FAM228B-209ENST00000615135 U2SURPO15042 1029 aaKnown RBP9.45□□□□□ -0.9
FAM228B-209ENST00000615135 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
FAM228B-209ENST00000615135 NEFMP07197 916 aa9.45□□□□□ -0.9
FAM228B-209ENST00000615135 SNRPA1P09661 255 aaKnown RBP9.45□□□□□ -0.9
FAM228B-209ENST00000615135 SREBF2Q12772 1141 aa9.45□□□□□ -0.9
FAM228B-209ENST00000615135 SLC10A5Q5PT55 438 aa9.45□□□□□ -0.9
FAM228B-209ENST00000615135 NUP98P52948 1817 aa9.45□□□□□ -0.9
FAM228B-209ENST00000615135 GNAT3A8MTJ3 354 aa9.44□□□□□ -0.9
FAM228B-209ENST00000615135 E9PSI1 815 aa9.44□□□□□ -0.9
FAM228B-209ENST00000615135 HMOX1P09601 288 aa9.44□□□□□ -0.9
FAM228B-209ENST00000615135 U2AF1L5P0DN76 240 aaPredicted RBP9.44□□□□□ -0.9
FAM228B-209ENST00000615135 U2AF1Q01081 240 aaKnown RBP eCLIP9.44□□□□□ -0.9
FAM228B-209ENST00000615135 KIF4BQ2VIQ3 1234 aa9.44□□□□□ -0.9
FAM228B-209ENST00000615135 NECTIN2Q92692 538 aa9.44□□□□□ -0.9
FAM228B-209ENST00000615135 GGA3Q9NZ52 723 aa9.44□□□□□ -0.9
FAM228B-209ENST00000615135 ABCC4O15439 1325 aa9.43□□□□□ -0.9
FAM228B-209ENST00000615135 ZNF521Q96K83 1311 aa9.43□□□□□ -0.9
FAM228B-209ENST00000615135 SUSD4Q5VX71 490 aa9.43□□□□□ -0.9
FAM228B-209ENST00000615135 ZNF34Q8IZ26 560 aa9.43□□□□□ -0.9
FAM228B-209ENST00000615135 ZNF333Q96JL9 665 aa9.43□□□□□ -0.9
FAM228B-209ENST00000615135 PCDHGA10Q9Y5H3 936 aa9.43□□□□□ -0.9
FAM228B-209ENST00000615135 DUOX1Q9NRD9 1551 aa9.42□□□□□ -0.9
FAM228B-209ENST00000615135 ASTN2O75129 1339 aaPredicted RBP9.42□□□□□ -0.9
FAM228B-209ENST00000615135 UBN2Q6ZU65 1347 aa9.42□□□□□ -0.9
FAM228B-209ENST00000615135 A0A1W2PPC1 479 aa9.42□□□□□ -0.9
FAM228B-209ENST00000615135 BTBD11A6QL63 1104 aa9.42□□□□□ -0.9
FAM228B-209ENST00000615135 UBE2Q2LH0YL09 131 aa9.42□□□□□ -0.9
FAM228B-209ENST00000615135 NTSR2O95665 410 aa9.42□□□□□ -0.9
FAM228B-209ENST00000615135 ZNF280AP59817 542 aaPredicted RBP9.42□□□□□ -0.9
FAM228B-209ENST00000615135 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
FAM228B-209ENST00000615135 MOB2Q70IA6 237 aa9.42□□□□□ -0.9
FAM228B-209ENST00000615135 NLRP3Q96P20 1036 aa9.42□□□□□ -0.9
FAM228B-209ENST00000615135 COL25A1Q9BXS0 654 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms